EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000015731 (Gene tree)
Gene ID: -
Gene Symbol: Upf2
Alias: -
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 113926 bases
Position: chrKI615364.1:1909069-2022994
Accession: 102927386
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000016546	Upf2	PF04050.14	3.6e-18	1	1
ENSPEMP00000016546	MIF4G	PF02854.19	9.9e-49	1	3
ENSPEMP00000016546	MIF4G	PF02854.19	9.9e-49	2	3
ENSPEMP00000016546	MIF4G	PF02854.19	9.9e-49	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000020858	-	3315	XM_015993484	ENSPEMP00000016546	1104 (aa)	XP_015848970	-

Gene Model

Click here to download ENSPEMG00000015731's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000015731's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000015731	Upf2	99	93.605	ENSG00000151461	UPF2	93	93.605	Homo_sapiens
ENSPEMG00000015731	Upf2	99	76.369	ENSAPOG00000015837	UPF2	93	76.369	Acanthochromis_polyacanthus
ENSPEMG00000015731	Upf2	99	96.210	ENSAMEG00000004586	UPF2	93	96.210	Ailuropoda_melanoleuca
ENSPEMG00000015731	Upf2	99	76.081	ENSACIG00000018078	UPF2	93	76.081	Amphilophus_citrinellus
ENSPEMG00000015731	Upf2	99	76.081	ENSAOCG00000016766	UPF2	93	76.081	Amphiprion_ocellaris
ENSPEMG00000015731	Upf2	99	76.369	ENSAPEG00000019084	UPF2	93	76.369	Amphiprion_percula
ENSPEMG00000015731	Upf2	99	77.233	ENSATEG00000021677	UPF2	92	77.233	Anabas_testudineus
ENSPEMG00000015731	Upf2	99	76.744	ENSAPLG00000010287	UPF2	83	95.516	Anas_platyrhynchos
ENSPEMG00000015731	Upf2	99	86.589	ENSACAG00000009259	UPF2	93	86.589	Anolis_carolinensis
ENSPEMG00000015731	Upf2	94	81.105	ENSANAG00000028451	UPF2	89	77.763	Aotus_nancymaae
ENSPEMG00000015731	Upf2	99	70.119	ENSACLG00000012696	UPF2	93	76.945	Astatotilapia_calliptera
ENSPEMG00000015731	Upf2	99	75.504	ENSAMXG00000013700	UPF2	92	75.504	Astyanax_mexicanus
ENSPEMG00000015731	Upf2	99	95.627	ENSBTAG00000000288	UPF2	93	95.627	Bos_taurus
ENSPEMG00000015731	Upf2	73	36.025	WBGene00004881	smg-3	58	36.025	Caenorhabditis_elegans
ENSPEMG00000015731	Upf2	99	90.962	ENSCJAG00000020685	UPF2	93	92.442	Callithrix_jacchus
ENSPEMG00000015731	Upf2	99	96.210	ENSCAFG00000004839	UPF2	93	96.210	Canis_familiaris
ENSPEMG00000015731	Upf2	99	96.210	ENSCAFG00020005882	UPF2	93	96.210	Canis_lupus_dingo
ENSPEMG00000015731	Upf2	99	95.918	ENSCHIG00000020359	UPF2	93	95.918	Capra_hircus
ENSPEMG00000015731	Upf2	99	93.878	ENSTSYG00000000935	UPF2	93	93.878	Carlito_syrichta
ENSPEMG00000015731	Upf2	90	97.881	ENSCAPG00000016658	UPF2	87	97.881	Cavia_aperea
ENSPEMG00000015731	Upf2	99	96.726	ENSCPOG00000008809	UPF2	93	95.238	Cavia_porcellus
ENSPEMG00000015731	Upf2	99	90.379	ENSCCAG00000035991	UPF2	92	91.860	Cebus_capucinus
ENSPEMG00000015731	Upf2	99	94.186	ENSCATG00000032679	UPF2	93	94.186	Cercocebus_atys
ENSPEMG00000015731	Upf2	99	96.501	ENSCLAG00000011434	UPF2	93	95.044	Chinchilla_lanigera
ENSPEMG00000015731	Upf2	99	94.186	ENSCSAG00000013372	UPF2	93	94.186	Chlorocebus_sabaeus
ENSPEMG00000015731	Upf2	85	84.887	ENSCHOG00000000422	UPF2	82	84.887	Choloepus_hoffmanni
ENSPEMG00000015731	Upf2	99	87.464	ENSCPBG00000027823	UPF2	93	86.880	Chrysemys_picta_bellii
ENSPEMG00000015731	Upf2	74	52.326	ENSCSAVG00000007772	-	87	52.326	Ciona_savignyi
ENSPEMG00000015731	Upf2	99	94.186	ENSCANG00000040396	UPF2	93	94.186	Colobus_angolensis_palliatus
ENSPEMG00000015731	Upf2	99	99.417	ENSCGRG00001019347	Upf2	93	99.417	Cricetulus_griseus_chok1gshd
ENSPEMG00000015731	Upf2	99	99.417	ENSCGRG00000017993	Upf2	93	99.417	Cricetulus_griseus_crigri
ENSPEMG00000015731	Upf2	89	85.463	ENSCSEG00000003520	UPF2	84	84.188	Cynoglossus_semilaevis
ENSPEMG00000015731	Upf2	99	75.964	ENSCVAG00000006167	UPF2	93	75.964	Cyprinodon_variegatus
ENSPEMG00000015731	Upf2	99	96.793	ENSDNOG00000018160	UPF2	93	96.793	Dasypus_novemcinctus
ENSPEMG00000015731	Upf2	99	97.376	ENSDORG00000002478	Upf2	93	97.376	Dipodomys_ordii
ENSPEMG00000015731	Upf2	68	61.883	ENSEBUG00000012448	-	80	61.883	Eptatretus_burgeri
ENSPEMG00000015731	Upf2	99	88.630	ENSEASG00005019274	UPF2	93	88.630	Equus_asinus_asinus
ENSPEMG00000015731	Upf2	99	95.044	ENSECAG00000017022	UPF2	93	93.586	Equus_caballus
ENSPEMG00000015731	Upf2	77	88.047	ENSEEUG00000007819	UPF2	68	88.047	Erinaceus_europaeus
ENSPEMG00000015731	Upf2	99	75.216	ENSELUG00000012014	UPF2	93	75.216	Esox_lucius
ENSPEMG00000015731	Upf2	99	95.627	ENSFCAG00000005785	UPF2	93	95.627	Felis_catus
ENSPEMG00000015731	Upf2	99	89.796	ENSFALG00000001889	UPF2	91	89.796	Ficedula_albicollis
ENSPEMG00000015731	Upf2	99	94.752	ENSFDAG00000014348	UPF2	93	93.294	Fukomys_damarensis
ENSPEMG00000015731	Upf2	98	76.829	ENSFHEG00000009826	UPF2	92	76.829	Fundulus_heteroclitus
ENSPEMG00000015731	Upf2	89	84.581	ENSGMOG00000005557	UPF2	100	64.286	Gadus_morhua
ENSPEMG00000015731	Upf2	99	91.545	ENSGALG00000033772	UPF2	93	91.545	Gallus_gallus
ENSPEMG00000015731	Upf2	90	82.700	ENSGAFG00000020867	UPF2	93	74.063	Gambusia_affinis
ENSPEMG00000015731	Upf2	89	84.821	ENSGACG00000001080	UPF2	93	75.504	Gasterosteus_aculeatus
ENSPEMG00000015731	Upf2	99	90.379	ENSGAGG00000002700	UPF2	93	90.379	Gopherus_agassizii
ENSPEMG00000015731	Upf2	99	93.605	ENSGGOG00000001479	UPF2	93	93.605	Gorilla_gorilla
ENSPEMG00000015731	Upf2	99	70.119	ENSHBUG00000004249	UPF2	93	76.945	Haplochromis_burtoni
ENSPEMG00000015731	Upf2	99	95.627	ENSHGLG00000015176	-	93	94.169	Heterocephalus_glaber_female
ENSPEMG00000015731	Upf2	99	80.175	ENSHGLG00000003822	-	92	78.134	Heterocephalus_glaber_female
ENSPEMG00000015731	Upf2	99	85.131	ENSHGLG00100010036	UPF2	93	83.673	Heterocephalus_glaber_male
ENSPEMG00000015731	Upf2	99	70.822	ENSHCOG00000004025	UPF2	92	71.023	Hippocampus_comes
ENSPEMG00000015731	Upf2	99	74.352	ENSIPUG00000015524	UPF2	93	75.216	Ictalurus_punctatus
ENSPEMG00000015731	Upf2	99	97.376	ENSSTOG00000013075	UPF2	93	97.376	Ictidomys_tridecemlineatus
ENSPEMG00000015731	Upf2	99	96.210	ENSJJAG00000004913	Upf2	93	96.210	Jaculus_jaculus
ENSPEMG00000015731	Upf2	90	84.255	ENSKMAG00000001071	UPF2	92	77.231	Kryptolebias_marmoratus
ENSPEMG00000015731	Upf2	79	77.011	ENSLBEG00000000728	-	84	77.011	Labrus_bergylta
ENSPEMG00000015731	Upf2	99	76.724	ENSLBEG00000016394	-	93	76.724	Labrus_bergylta
ENSPEMG00000015731	Upf2	99	81.176	ENSLACG00000015945	UPF2	93	81.176	Latimeria_chalumnae
ENSPEMG00000015731	Upf2	99	80.240	ENSLOCG00000015698	UPF2	93	80.240	Lepisosteus_oculatus
ENSPEMG00000015731	Upf2	99	93.895	ENSMFAG00000043865	UPF2	93	93.895	Macaca_fascicularis
ENSPEMG00000015731	Upf2	99	93.895	ENSMMUG00000008241	UPF2	93	93.895	Macaca_mulatta
ENSPEMG00000015731	Upf2	80	93.895	ENSMNEG00000008062	UPF2	91	93.895	Macaca_nemestrina
ENSPEMG00000015731	Upf2	99	94.186	ENSMLEG00000036120	UPF2	93	94.186	Mandrillus_leucophaeus
ENSPEMG00000015731	Upf2	99	75.504	ENSMAMG00000018276	UPF2	93	75.504	Mastacembelus_armatus
ENSPEMG00000015731	Upf2	99	70.119	ENSMZEG00005021595	UPF2	93	76.945	Maylandia_zebra
ENSPEMG00000015731	Upf2	99	90.962	ENSMGAG00000004573	UPF2	93	90.962	Meleagris_gallopavo
ENSPEMG00000015731	Upf2	99	98.834	ENSMAUG00000016512	Upf2	93	98.834	Mesocricetus_auratus
ENSPEMG00000015731	Upf2	94	95.044	ENSMICG00000001716	UPF2	92	95.044	Microcebus_murinus
ENSPEMG00000015731	Upf2	99	96.210	ENSMOCG00000008263	Upf2	93	96.501	Microtus_ochrogaster
ENSPEMG00000015731	Upf2	99	74.928	ENSMMOG00000006528	UPF2	93	76.081	Mola_mola
ENSPEMG00000015731	Upf2	99	93.878	ENSMODG00000016794	UPF2	93	93.878	Monodelphis_domestica
ENSPEMG00000015731	Upf2	99	76.369	ENSMALG00000002663	UPF2	93	76.369	Monopterus_albus
ENSPEMG00000015731	Upf2	99	97.085	MGP_CAROLIEiJ_G0023157	Upf2	92	98.157	Mus_caroli
ENSPEMG00000015731	Upf2	99	97.085	ENSMUSG00000043241	Upf2	93	97.085	Mus_musculus
ENSPEMG00000015731	Upf2	99	98.251	MGP_PahariEiJ_G0019217	Upf2	93	98.251	Mus_pahari
ENSPEMG00000015731	Upf2	99	97.959	MGP_SPRETEiJ_G0024075	Upf2	93	97.959	Mus_spretus
ENSPEMG00000015731	Upf2	99	95.918	ENSMPUG00000001064	UPF2	93	95.918	Mustela_putorius_furo
ENSPEMG00000015731	Upf2	99	96.210	ENSMLUG00000000228	UPF2	93	96.210	Myotis_lucifugus
ENSPEMG00000015731	Upf2	99	70.119	ENSNBRG00000013629	UPF2	93	76.945	Neolamprologus_brichardi
ENSPEMG00000015731	Upf2	99	94.477	ENSNLEG00000012058	UPF2	93	94.477	Nomascus_leucogenys
ENSPEMG00000015731	Upf2	52	96.923	ENSMEUG00000002180	-	59	96.923	Notamacropus_eugenii
ENSPEMG00000015731	Upf2	75	97.351	ENSOPRG00000006801	-	70	97.351	Ochotona_princeps
ENSPEMG00000015731	Upf2	99	95.918	ENSODEG00000001290	UPF2	93	94.461	Octodon_degus
ENSPEMG00000015731	Upf2	99	70.238	ENSONIG00000017991	UPF2	93	76.657	Oreochromis_niloticus
ENSPEMG00000015731	Upf2	99	90.000	ENSOCUG00000006230	UPF2	93	92.000	Oryctolagus_cuniculus
ENSPEMG00000015731	Upf2	99	73.333	ENSORLG00000017189	UPF2	93	74.493	Oryzias_latipes
ENSPEMG00000015731	Upf2	99	73.043	ENSORLG00020005969	UPF2	93	74.203	Oryzias_latipes_hni
ENSPEMG00000015731	Upf2	99	73.043	ENSORLG00015005713	UPF2	93	74.203	Oryzias_latipes_hsok
ENSPEMG00000015731	Upf2	99	76.232	ENSOMEG00000023420	UPF2	90	76.232	Oryzias_melastigma
ENSPEMG00000015731	Upf2	99	95.627	ENSOGAG00000005796	UPF2	93	95.627	Otolemur_garnettii
ENSPEMG00000015731	Upf2	99	95.918	ENSOARG00000014587	UPF2	93	95.918	Ovis_aries
ENSPEMG00000015731	Upf2	99	93.605	ENSPPAG00000037953	UPF2	93	93.605	Pan_paniscus
ENSPEMG00000015731	Upf2	99	95.627	ENSPPRG00000000690	UPF2	93	95.627	Panthera_pardus
ENSPEMG00000015731	Upf2	99	95.627	ENSPTIG00000008867	UPF2	93	95.627	Panthera_tigris_altaica
ENSPEMG00000015731	Upf2	99	93.605	ENSPTRG00000002291	UPF2	93	93.605	Pan_troglodytes
ENSPEMG00000015731	Upf2	99	94.186	ENSPANG00000023399	UPF2	93	94.186	Papio_anubis
ENSPEMG00000015731	Upf2	99	69.524	ENSPKIG00000025502	UPF2	93	70.630	Paramormyrops_kingsleyae
ENSPEMG00000015731	Upf2	57	90.671	ENSPSIG00000015158	UPF2	84	90.671	Pelodiscus_sinensis
ENSPEMG00000015731	Upf2	99	74.344	ENSPMGG00000005259	UPF2	93	74.344	Periophthalmus_magnuspinnatus
ENSPEMG00000015731	Upf2	99	92.711	ENSPCIG00000006656	UPF2	93	92.711	Phascolarctos_cinereus
ENSPEMG00000015731	Upf2	90	82.700	ENSPFOG00000017118	UPF2	93	74.063	Poecilia_formosa
ENSPEMG00000015731	Upf2	90	82.700	ENSPLAG00000005094	UPF2	93	74.063	Poecilia_latipinna
ENSPEMG00000015731	Upf2	90	82.700	ENSPMEG00000017009	UPF2	93	74.063	Poecilia_mexicana
ENSPEMG00000015731	Upf2	99	69.892	ENSPREG00000021880	UPF2	93	74.640	Poecilia_reticulata
ENSPEMG00000015731	Upf2	69	83.094	ENSPPYG00000002089	-	99	82.614	Pongo_abelii
ENSPEMG00000015731	Upf2	89	95.814	ENSPCAG00000000684	UPF2	80	95.370	Procavia_capensis
ENSPEMG00000015731	Upf2	99	94.461	ENSPCOG00000021656	UPF2	93	94.461	Propithecus_coquereli
ENSPEMG00000015731	Upf2	99	95.918	ENSPVAG00000017286	UPF2	93	95.918	Pteropus_vampyrus
ENSPEMG00000015731	Upf2	99	69.452	ENSPNYG00000017096	UPF2	93	76.945	Pundamilia_nyererei
ENSPEMG00000015731	Upf2	99	77.522	ENSPNAG00000009357	UPF2	93	77.522	Pygocentrus_nattereri
ENSPEMG00000015731	Upf2	99	98.834	ENSRNOG00000023593	Upf2	93	98.834	Rattus_norvegicus
ENSPEMG00000015731	Upf2	99	90.671	ENSRBIG00000037780	UPF2	93	90.671	Rhinopithecus_bieti
ENSPEMG00000015731	Upf2	99	93.895	ENSRROG00000043547	UPF2	93	93.895	Rhinopithecus_roxellana
ENSPEMG00000015731	Upf2	99	90.087	ENSSBOG00000020012	UPF2	93	91.570	Saimiri_boliviensis_boliviensis
ENSPEMG00000015731	Upf2	99	71.387	ENSSFOG00015023788	upf2	93	76.590	Scleropages_formosus
ENSPEMG00000015731	Upf2	88	84.259	ENSSMAG00000007637	UPF2	87	81.061	Scophthalmus_maximus
ENSPEMG00000015731	Upf2	99	76.657	ENSSDUG00000017244	UPF2	93	76.657	Seriola_dumerili
ENSPEMG00000015731	Upf2	79	76.657	ENSSLDG00000016866	UPF2	74	76.657	Seriola_lalandi_dorsalis
ENSPEMG00000015731	Upf2	99	93.878	ENSSARG00000008615	UPF2	93	93.878	Sorex_araneus
ENSPEMG00000015731	Upf2	99	85.131	ENSSPUG00000014544	UPF2	91	85.131	Sphenodon_punctatus
ENSPEMG00000015731	Upf2	69	82.854	ENSSSCG00000011117	-	96	82.275	Sus_scrofa
ENSPEMG00000015731	Upf2	99	89.213	ENSTGUG00000002163	-	93	89.213	Taeniopygia_guttata
ENSPEMG00000015731	Upf2	99	75.652	ENSTRUG00000007519	UPF2	92	75.652	Takifugu_rubripes
ENSPEMG00000015731	Upf2	99	69.540	ENSTNIG00000004453	UPF2	92	69.467	Tetraodon_nigroviridis
ENSPEMG00000015731	Upf2	94	95.044	ENSTBEG00000012679	UPF2	86	95.044	Tupaia_belangeri
ENSPEMG00000015731	Upf2	99	93.878	ENSTTRG00000016388	UPF2	93	94.169	Tursiops_truncatus
ENSPEMG00000015731	Upf2	99	95.918	ENSUAMG00000023560	UPF2	92	95.918	Ursus_americanus
ENSPEMG00000015731	Upf2	99	95.918	ENSUMAG00000012953	UPF2	88	95.918	Ursus_maritimus
ENSPEMG00000015731	Upf2	85	96.774	ENSVPAG00000006763	UPF2	78	96.774	Vicugna_pacos
ENSPEMG00000015731	Upf2	99	95.918	ENSVVUG00000006166	UPF2	93	95.918	Vulpes_vulpes
ENSPEMG00000015731	Upf2	99	73.389	ENSXETG00000033103	UPF2	93	73.063	Xenopus_tropicalis
ENSPEMG00000015731	Upf2	90	83.122	ENSXCOG00000011604	UPF2	93	73.487	Xiphophorus_couchianus
ENSPEMG00000015731	Upf2	90	83.122	ENSXMAG00000017209	UPF2	93	73.775	Xiphophorus_maculatus