EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000015800 (Gene tree)
Gene ID: 102913320
Gene Symbol: Ciao1
Alias: -
Full Name: cytosolic iron-sulfur assembly component 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 6702 bases
Position: chrKI615613.1:599499-606200
Accession: 102913320
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000016631	eIF2A	PF08662.11	0.0002	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000020943	-	531	-	ENSPEMP00000016631	176 (aa)	-	-
ENSPEMT00000020941	-	3191	XM_006986461	ENSPEMP00000016629	339 (aa)	XP_006986523	UPI00042AB68F
ENSPEMT00000020948	-	702	-	ENSPEMP00000016636	233 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000015800's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000015800's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000015800	Ciao1	89	35.556	ENSPEMG00000019087	Wdr5	82	35.556
ENSPEMG00000015800	Ciao1	80	35.644	ENSPEMG00000024131	Poc1a	87	35.514
ENSPEMG00000015800	Ciao1	82	34.737	ENSPEMG00000004447	Wdr5b	84	34.737

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000015800	Ciao1	85	67.333	ENSCING00000006781	-	99	62.874	Ciona_intestinalis
ENSPEMG00000015800	Ciao1	99	62.275	ENSCSAVG00000003355	-	99	62.275	Ciona_savignyi
ENSPEMG00000015800	Ciao1	100	96.591	ENSCGRG00001016622	Ciao1	100	96.591	Cricetulus_griseus_chok1gshd
ENSPEMG00000015800	Ciao1	94	80.120	ENSMZEG00005010812	ciao1	100	80.120	Maylandia_zebra
ENSPEMG00000015800	Ciao1	100	97.159	ENSMAUG00000021994	Ciao1	100	97.159	Mesocricetus_auratus
ENSPEMG00000015800	Ciao1	99	94.857	ENSMOCG00000009518	Ciao1	99	94.857	Microtus_ochrogaster
ENSPEMG00000015800	Ciao1	94	83.735	ENSMALG00000002097	ciao1	99	83.735	Monopterus_albus
ENSPEMG00000015800	Ciao1	99	97.143	MGP_CAROLIEiJ_G0024251	Ciao1	99	97.143	Mus_caroli
ENSPEMG00000015800	Ciao1	99	96.571	ENSMUSG00000003662	Ciao1	99	96.571	Mus_musculus
ENSPEMG00000015800	Ciao1	99	96.000	MGP_PahariEiJ_G0025696	Ciao1	99	96.000	Mus_pahari
ENSPEMG00000015800	Ciao1	99	96.571	MGP_SPRETEiJ_G0025171	Ciao1	99	96.571	Mus_spretus