EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000015838 (Gene tree)
Gene ID: 102925418
Gene Symbol: Gar1
Alias: -
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 7694 bases
Position: chrKI615321.1:13557062-13564755
Accession: 102925418
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000016687	Gar1	PF04410.14	4.5e-39	1	1
ENSPEMP00000016691	Gar1	PF04410.14	1.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000020999	-	1536	XM_015993025	ENSPEMP00000016687	223 (aa)	XP_015848511	UPI00077D9BA3
ENSPEMT00000021004	-	240	-	ENSPEMP00000016691	79 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000015838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000015838's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000015838	Gar1	70	98.182	ENSG00000109534	GAR1	50	96.330	Homo_sapiens
ENSPEMG00000015838	Gar1	70	98.182	ENSAPOG00000019754	gar1	67	86.620	Acanthochromis_polyacanthus
ENSPEMG00000015838	Gar1	70	98.182	ENSAMEG00000004605	GAR1	53	94.495	Ailuropoda_melanoleuca
ENSPEMG00000015838	Gar1	96	92.105	ENSAOCG00000020947	gar1	50	96.262	Amphiprion_ocellaris
ENSPEMG00000015838	Gar1	96	92.105	ENSAPEG00000001676	gar1	50	96.262	Amphiprion_percula
ENSPEMG00000015838	Gar1	96	94.805	ENSATEG00000003733	gar1	50	96.262	Anabas_testudineus
ENSPEMG00000015838	Gar1	70	92.727	ENSAPLG00000010926	GAR1	59	91.509	Anas_platyrhynchos
ENSPEMG00000015838	Gar1	70	94.545	ENSACAG00000010031	GAR1	50	92.453	Anolis_carolinensis
ENSPEMG00000015838	Gar1	70	98.182	ENSANAG00000021608	GAR1	50	96.330	Aotus_nancymaae
ENSPEMG00000015838	Gar1	70	98.182	ENSBTAG00000000748	GAR1	52	95.413	Bos_taurus
ENSPEMG00000015838	Gar1	59	57.447	WBGene00022046	Y66H1A.4	58	56.250	Caenorhabditis_elegans
ENSPEMG00000015838	Gar1	70	98.182	ENSCJAG00000004041	GAR1	50	96.330	Callithrix_jacchus
ENSPEMG00000015838	Gar1	66	98.077	ENSCAFG00020015566	GAR1	57	95.413	Canis_lupus_dingo
ENSPEMG00000015838	Gar1	70	98.182	ENSCHIG00000016026	-	52	95.413	Capra_hircus
ENSPEMG00000015838	Gar1	52	95.122	ENSCHIG00000011049	-	55	82.569	Capra_hircus
ENSPEMG00000015838	Gar1	70	98.182	ENSTSYG00000013668	-	51	96.330	Carlito_syrichta
ENSPEMG00000015838	Gar1	70	87.273	ENSTSYG00000026632	-	56	88.073	Carlito_syrichta
ENSPEMG00000015838	Gar1	70	96.364	ENSCAPG00000014977	-	69	96.364	Cavia_aperea
ENSPEMG00000015838	Gar1	70	98.182	ENSCPOG00000004216	GAR1	50	95.413	Cavia_porcellus
ENSPEMG00000015838	Gar1	70	98.182	ENSCCAG00000029372	GAR1	50	96.330	Cebus_capucinus
ENSPEMG00000015838	Gar1	70	98.182	ENSCATG00000021854	GAR1	55	96.330	Cercocebus_atys
ENSPEMG00000015838	Gar1	100	95.000	ENSCLAG00000005335	GAR1	100	95.000	Chinchilla_lanigera
ENSPEMG00000015838	Gar1	66	98.077	ENSCSAG00000003922	GAR1	55	96.330	Chlorocebus_sabaeus
ENSPEMG00000015838	Gar1	70	96.364	ENSCPBG00000004310	GAR1	54	94.340	Chrysemys_picta_bellii
ENSPEMG00000015838	Gar1	63	74.000	ENSCING00000005744	-	52	66.667	Ciona_intestinalis
ENSPEMG00000015838	Gar1	70	96.364	ENSCANG00000039262	GAR1	50	95.413	Colobus_angolensis_palliatus
ENSPEMG00000015838	Gar1	100	98.655	ENSCGRG00001003919	Gar1	100	98.655	Cricetulus_griseus_chok1gshd
ENSPEMG00000015838	Gar1	99	98.718	ENSCGRG00000010165	-	94	98.333	Cricetulus_griseus_crigri
ENSPEMG00000015838	Gar1	70	96.364	ENSCVAG00000002103	gar1	51	96.262	Cyprinodon_variegatus
ENSPEMG00000015838	Gar1	99	93.590	ENSDNOG00000037632	GAR1	55	95.413	Dasypus_novemcinctus
ENSPEMG00000015838	Gar1	70	96.364	ENSDORG00000000482	Gar1	50	94.495	Dipodomys_ordii
ENSPEMG00000015838	Gar1	70	98.182	ENSEASG00005004658	GAR1	50	96.330	Equus_asinus_asinus
ENSPEMG00000015838	Gar1	70	98.182	ENSECAG00000013624	GAR1	55	95.413	Equus_caballus
ENSPEMG00000015838	Gar1	65	50.980	ENSFCAG00000025841	-	57	60.504	Felis_catus
ENSPEMG00000015838	Gar1	70	98.182	ENSFCAG00000040791	-	52	95.413	Felis_catus
ENSPEMG00000015838	Gar1	100	95.000	ENSFDAG00000006333	-	100	95.000	Fukomys_damarensis
ENSPEMG00000015838	Gar1	84	87.179	ENSFHEG00000008068	gar1	83	86.567	Fundulus_heteroclitus
ENSPEMG00000015838	Gar1	67	98.113	ENSGAGG00000004393	GAR1	54	94.286	Gopherus_agassizii
ENSPEMG00000015838	Gar1	70	98.182	ENSGGOG00000008681	GAR1	50	97.248	Gorilla_gorilla
ENSPEMG00000015838	Gar1	70	74.545	ENSGGOG00000036205	-	54	77.064	Gorilla_gorilla
ENSPEMG00000015838	Gar1	70	98.182	ENSHGLG00000000493	GAR1	72	98.182	Heterocephalus_glaber_female
ENSPEMG00000015838	Gar1	66	98.077	ENSHGLG00100016873	-	72	98.182	Heterocephalus_glaber_male
ENSPEMG00000015838	Gar1	70	96.364	ENSIPUG00000003194	gar1	72	81.579	Ictalurus_punctatus
ENSPEMG00000015838	Gar1	70	98.182	ENSSTOG00000005577	GAR1	71	98.182	Ictidomys_tridecemlineatus
ENSPEMG00000015838	Gar1	70	96.364	ENSJJAG00000010063	Gar1	64	93.007	Jaculus_jaculus
ENSPEMG00000015838	Gar1	70	96.364	ENSKMAG00000010402	gar1	51	93.458	Kryptolebias_marmoratus
ENSPEMG00000015838	Gar1	70	92.727	ENSLACG00000003306	GAR1	64	89.623	Latimeria_chalumnae
ENSPEMG00000015838	Gar1	72	77.193	ENSMFAG00000003572	-	53	81.651	Macaca_fascicularis
ENSPEMG00000015838	Gar1	70	98.182	ENSMFAG00000024592	GAR1	50	96.330	Macaca_fascicularis
ENSPEMG00000015838	Gar1	70	98.182	ENSMMUG00000021225	GAR1	50	96.330	Macaca_mulatta
ENSPEMG00000015838	Gar1	70	98.182	ENSMNEG00000042594	GAR1	50	96.330	Macaca_nemestrina
ENSPEMG00000015838	Gar1	70	98.182	ENSMLEG00000002496	GAR1	50	96.330	Mandrillus_leucophaeus
ENSPEMG00000015838	Gar1	68	98.148	ENSMAMG00000017583	gar1	62	88.406	Mastacembelus_armatus
ENSPEMG00000015838	Gar1	100	100.000	ENSMAUG00000016788	Gar1	100	100.000	Mesocricetus_auratus
ENSPEMG00000015838	Gar1	70	96.364	ENSMICG00000003326	GAR1	50	95.413	Microcebus_murinus
ENSPEMG00000015838	Gar1	100	97.468	ENSMOCG00000001340	Gar1	100	97.468	Microtus_ochrogaster
ENSPEMG00000015838	Gar1	70	98.182	ENSMMOG00000004156	gar1	52	94.393	Mola_mola
ENSPEMG00000015838	Gar1	70	96.364	ENSMALG00000009672	gar1	50	95.327	Monopterus_albus
ENSPEMG00000015838	Gar1	100	98.734	MGP_CAROLIEiJ_G0025627	Gar1	100	98.734	Mus_caroli
ENSPEMG00000015838	Gar1	100	98.734	ENSMUSG00000028010	Gar1	100	98.734	Mus_musculus
ENSPEMG00000015838	Gar1	100	98.734	MGP_PahariEiJ_G0027076	Gar1	100	98.734	Mus_pahari
ENSPEMG00000015838	Gar1	100	98.734	MGP_SPRETEiJ_G0026580	Gar1	100	98.734	Mus_spretus
ENSPEMG00000015838	Gar1	70	98.182	ENSMPUG00000008615	GAR1	52	95.413	Mustela_putorius_furo
ENSPEMG00000015838	Gar1	70	96.364	ENSNGAG00000008268	Gar1	71	96.364	Nannospalax_galili
ENSPEMG00000015838	Gar1	72	75.439	ENSNLEG00000034282	-	55	80.734	Nomascus_leucogenys
ENSPEMG00000015838	Gar1	70	98.182	ENSNLEG00000016578	GAR1	50	96.330	Nomascus_leucogenys
ENSPEMG00000015838	Gar1	99	94.937	ENSODEG00000011083	GAR1	56	93.578	Octodon_degus
ENSPEMG00000015838	Gar1	70	98.182	ENSOCUG00000003901	GAR1	51	95.413	Oryctolagus_cuniculus
ENSPEMG00000015838	Gar1	78	98.387	ENSOGAG00000004693	GAR1	51	97.248	Otolemur_garnettii
ENSPEMG00000015838	Gar1	70	98.182	ENSOARG00000004910	GAR1	52	95.413	Ovis_aries
ENSPEMG00000015838	Gar1	99	93.590	ENSPPAG00000014081	GAR1	55	96.330	Pan_paniscus
ENSPEMG00000015838	Gar1	70	98.182	ENSPPRG00000023697	GAR1	52	95.413	Panthera_pardus
ENSPEMG00000015838	Gar1	70	98.182	ENSPTIG00000021565	GAR1	52	95.413	Panthera_tigris_altaica
ENSPEMG00000015838	Gar1	70	78.182	ENSPTRG00000049340	-	51	78.505	Pan_troglodytes
ENSPEMG00000015838	Gar1	70	98.182	ENSPTRG00000016364	GAR1	55	96.330	Pan_troglodytes
ENSPEMG00000015838	Gar1	77	73.684	ENSPANG00000033062	-	63	72.258	Papio_anubis
ENSPEMG00000015838	Gar1	70	98.182	ENSPANG00000000639	GAR1	50	96.330	Papio_anubis
ENSPEMG00000015838	Gar1	70	96.364	ENSPFOG00000024155	gar1	51	95.327	Poecilia_formosa
ENSPEMG00000015838	Gar1	70	96.364	ENSPLAG00000015056	gar1	51	95.327	Poecilia_latipinna
ENSPEMG00000015838	Gar1	70	96.364	ENSPMEG00000009320	gar1	51	96.262	Poecilia_mexicana
ENSPEMG00000015838	Gar1	70	98.182	ENSPPYG00000014996	GAR1	50	96.330	Pongo_abelii
ENSPEMG00000015838	Gar1	66	98.077	ENSPCOG00000027049	GAR1	56	96.330	Propithecus_coquereli
ENSPEMG00000015838	Gar1	77	97.110	ENSRNOG00000061146	Gar1	100	97.110	Rattus_norvegicus
ENSPEMG00000015838	Gar1	71	75.000	ENSRBIG00000042411	-	53	79.817	Rhinopithecus_bieti
ENSPEMG00000015838	Gar1	70	98.182	ENSRBIG00000019547	GAR1	55	96.330	Rhinopithecus_bieti
ENSPEMG00000015838	Gar1	71	75.000	ENSRROG00000044348	-	52	79.817	Rhinopithecus_roxellana
ENSPEMG00000015838	Gar1	70	98.182	ENSRROG00000028454	GAR1	55	96.330	Rhinopithecus_roxellana
ENSPEMG00000015838	Gar1	94	45.946	YHR089C	-	93	49.383	Saccharomyces_cerevisiae
ENSPEMG00000015838	Gar1	70	98.182	ENSSBOG00000024785	GAR1	50	96.330	Saimiri_boliviensis_boliviensis
ENSPEMG00000015838	Gar1	75	96.610	ENSSHAG00000002161	GAR1	66	74.675	Sarcophilus_harrisii
ENSPEMG00000015838	Gar1	96	94.805	ENSSLDG00000023264	gar1	78	88.406	Seriola_lalandi_dorsalis
ENSPEMG00000015838	Gar1	70	96.364	ENSSPUG00000008707	GAR1	59	95.283	Sphenodon_punctatus
ENSPEMG00000015838	Gar1	96	94.805	ENSSPAG00000005974	gar1	50	95.614	Stegastes_partitus
ENSPEMG00000015838	Gar1	70	98.182	ENSSSCG00000009137	GAR1	54	95.413	Sus_scrofa
ENSPEMG00000015838	Gar1	70	94.545	ENSTGUG00000004185	GAR1	67	91.919	Taeniopygia_guttata
ENSPEMG00000015838	Gar1	70	90.909	ENSTRUG00000020580	gar1	51	92.523	Takifugu_rubripes
ENSPEMG00000015838	Gar1	82	84.615	ENSTNIG00000013023	gar1	61	95.327	Tetraodon_nigroviridis
ENSPEMG00000015838	Gar1	66	98.077	ENSUAMG00000005652	GAR1	57	95.413	Ursus_americanus
ENSPEMG00000015838	Gar1	70	98.182	ENSUMAG00000000776	GAR1	53	95.413	Ursus_maritimus
ENSPEMG00000015838	Gar1	70	98.182	ENSVVUG00000017612	GAR1	56	95.413	Vulpes_vulpes