EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000015842 (Gene tree)
Gene ID: 102902923
Gene Symbol: Srl
Alias: -
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 40903 bases
Position: chrKI615553.1:4815873-4856775
Accession: 102902923
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000016694	MMR_HSR1	PF01926.23	8.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000021007	-	1419	XM_006984697	ENSPEMP00000016694	472 (aa)	XP_006984759	-

Gene Model

Click here to download ENSPEMG00000015842's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000015842's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000015842	Srl	63	35.906	ENSPEMG00000015332	Ehd4	55	35.906
ENSPEMG00000015842	Srl	77	33.973	ENSPEMG00000010917	Ehd1	67	33.973
ENSPEMG00000015842	Srl	79	32.440	ENSPEMG00000022821	Ehd3	70	33.421
ENSPEMG00000015842	Srl	84	32.494	ENSPEMG00000001905	Ehd2	67	33.784

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000015842	Srl	100	95.560	ENSG00000185739	SRL	100	97.216	Homo_sapiens
ENSPEMG00000015842	Srl	100	80.932	ENSAPOG00000018093	srl	100	83.559	Acanthochromis_polyacanthus
ENSPEMG00000015842	Srl	94	76.697	ENSAPOG00000012432	SRL	98	75.566	Acanthochromis_polyacanthus
ENSPEMG00000015842	Srl	98	96.320	ENSAMEG00000010862	SRL	52	96.320	Ailuropoda_melanoleuca
ENSPEMG00000015842	Srl	94	74.550	ENSACIG00000015419	SRL	99	74.550	Amphilophus_citrinellus
ENSPEMG00000015842	Srl	96	82.743	ENSACIG00000015799	srl	99	82.743	Amphilophus_citrinellus
ENSPEMG00000015842	Srl	92	84.332	ENSAOCG00000007574	srl	100	84.332	Amphiprion_ocellaris
ENSPEMG00000015842	Srl	96	75.000	ENSAOCG00000017049	SRL	99	75.000	Amphiprion_ocellaris
ENSPEMG00000015842	Srl	100	81.144	ENSAPEG00000006911	srl	96	82.965	Amphiprion_percula
ENSPEMG00000015842	Srl	96	70.989	ENSAPEG00000006533	SRL	99	70.989	Amphiprion_percula
ENSPEMG00000015842	Srl	94	73.407	ENSATEG00000009643	SRL	52	72.747	Anabas_testudineus
ENSPEMG00000015842	Srl	100	80.932	ENSATEG00000024315	srl	97	82.418	Anabas_testudineus
ENSPEMG00000015842	Srl	100	86.475	ENSACAG00000016380	SRL	85	89.224	Anolis_carolinensis
ENSPEMG00000015842	Srl	98	81.720	ENSACLG00000027685	srl	98	82.889	Astatotilapia_calliptera
ENSPEMG00000015842	Srl	94	72.527	ENSACLG00000024674	SRL	57	72.747	Astatotilapia_calliptera
ENSPEMG00000015842	Srl	88	78.072	ENSAMXG00000038693	SRL	100	73.289	Astyanax_mexicanus
ENSPEMG00000015842	Srl	99	80.892	ENSAMXG00000018789	srl	86	83.900	Astyanax_mexicanus
ENSPEMG00000015842	Srl	96	96.026	ENSBTAG00000001078	SRL	57	96.026	Bos_taurus
ENSPEMG00000015842	Srl	94	97.065	ENSCJAG00000019750	SRL	96	96.272	Callithrix_jacchus
ENSPEMG00000015842	Srl	97	96.522	ENSCAFG00000019233	SRL	84	97.345	Canis_familiaris
ENSPEMG00000015842	Srl	96	96.923	ENSCAFG00020025024	SRL	56	96.923	Canis_lupus_dingo
ENSPEMG00000015842	Srl	99	94.839	ENSCHIG00000017927	SRL	57	96.026	Capra_hircus
ENSPEMG00000015842	Srl	100	96.406	ENSTSYG00000007919	SRL	100	97.680	Carlito_syrichta
ENSPEMG00000015842	Srl	100	97.669	ENSCPOG00000012643	SRL	100	97.669	Cavia_porcellus
ENSPEMG00000015842	Srl	94	90.745	ENSCCAG00000032646	SRL	100	97.098	Cebus_capucinus
ENSPEMG00000015842	Srl	100	95.772	ENSCATG00000032227	-	96	96.491	Cercocebus_atys
ENSPEMG00000015842	Srl	100	97.458	ENSCLAG00000016242	SRL	100	97.458	Chinchilla_lanigera
ENSPEMG00000015842	Srl	82	96.623	ENSCHOG00000001618	SRL	52	96.623	Choloepus_hoffmanni
ENSPEMG00000015842	Srl	96	93.005	ENSCPBG00000026371	SRL	95	88.769	Chrysemys_picta_bellii
ENSPEMG00000015842	Srl	94	57.047	ENSCING00000005231	-	91	60.345	Ciona_intestinalis
ENSPEMG00000015842	Srl	100	95.772	ENSCANG00000035872	SRL	100	97.216	Colobus_angolensis_palliatus
ENSPEMG00000015842	Srl	100	98.517	ENSCGRG00001016630	Srl	100	98.517	Cricetulus_griseus_chok1gshd
ENSPEMG00000015842	Srl	100	98.517	ENSCGRG00000005458	Srl	100	98.517	Cricetulus_griseus_crigri
ENSPEMG00000015842	Srl	100	81.144	ENSCSEG00000016151	srl	97	82.159	Cynoglossus_semilaevis
ENSPEMG00000015842	Srl	99	70.362	ENSCSEG00000011866	SRL	92	71.930	Cynoglossus_semilaevis
ENSPEMG00000015842	Srl	94	75.221	ENSCVAG00000022465	SRL	60	75.221	Cyprinodon_variegatus
ENSPEMG00000015842	Srl	100	80.720	ENSCVAG00000003513	srl	96	83.484	Cyprinodon_variegatus
ENSPEMG00000015842	Srl	80	76.562	ENSDARG00000112959	CABZ01072309.1	90	82.558	Danio_rerio
ENSPEMG00000015842	Srl	100	81.992	ENSDARG00000104587	srl	96	83.778	Danio_rerio
ENSPEMG00000015842	Srl	96	96.009	ENSDNOG00000011643	SRL	54	95.815	Dasypus_novemcinctus
ENSPEMG00000015842	Srl	100	97.881	ENSDORG00000014807	Srl	100	97.881	Dipodomys_ordii
ENSPEMG00000015842	Srl	75	67.787	ENSEBUG00000015937	srl	88	67.816	Eptatretus_burgeri
ENSPEMG00000015842	Srl	96	96.026	ENSEASG00005000942	SRL	55	96.026	Equus_asinus_asinus
ENSPEMG00000015842	Srl	99	95.127	ENSECAG00000024219	SRL	96	96.044	Equus_caballus
ENSPEMG00000015842	Srl	100	77.207	ENSELUG00000015616	srl	96	79.229	Esox_lucius
ENSPEMG00000015842	Srl	100	94.715	ENSFCAG00000022075	SRL	96	96.711	Felis_catus
ENSPEMG00000015842	Srl	96	89.404	ENSFALG00000004328	SRL	64	89.800	Ficedula_albicollis
ENSPEMG00000015842	Srl	100	97.458	ENSFDAG00000006199	SRL	100	97.458	Fukomys_damarensis
ENSPEMG00000015842	Srl	100	80.508	ENSFHEG00000011239	srl	97	81.718	Fundulus_heteroclitus
ENSPEMG00000015842	Srl	99	71.340	ENSFHEG00000011854	SRL	98	76.244	Fundulus_heteroclitus
ENSPEMG00000015842	Srl	93	81.015	ENSGMOG00000014954	srl	99	81.015	Gadus_morhua
ENSPEMG00000015842	Srl	99	88.960	ENSGALG00000038884	SRL	96	89.427	Gallus_gallus
ENSPEMG00000015842	Srl	100	80.508	ENSGAFG00000000010	srl	97	82.921	Gambusia_affinis
ENSPEMG00000015842	Srl	94	76.923	ENSGAFG00000016984	SRL	98	75.792	Gambusia_affinis
ENSPEMG00000015842	Srl	93	81.457	ENSGACG00000011332	srl	99	81.457	Gasterosteus_aculeatus
ENSPEMG00000015842	Srl	100	95.349	ENSGGOG00000011312	-	96	96.491	Gorilla_gorilla
ENSPEMG00000015842	Srl	94	72.308	ENSHBUG00000015710	SRL	57	72.527	Haplochromis_burtoni
ENSPEMG00000015842	Srl	98	81.720	ENSHBUG00000007581	srl	98	82.889	Haplochromis_burtoni
ENSPEMG00000015842	Srl	100	97.881	ENSHGLG00000015271	SRL	100	97.881	Heterocephalus_glaber_female
ENSPEMG00000015842	Srl	100	97.881	ENSHGLG00100019378	SRL	100	97.881	Heterocephalus_glaber_male
ENSPEMG00000015842	Srl	100	79.661	ENSHCOG00000008687	srl	98	83.032	Hippocampus_comes
ENSPEMG00000015842	Srl	94	72.627	ENSHCOG00000001012	SRL	50	71.523	Hippocampus_comes
ENSPEMG00000015842	Srl	92	70.183	ENSIPUG00000011609	SRL	95	69.037	Ictalurus_punctatus
ENSPEMG00000015842	Srl	100	79.237	ENSIPUG00000012513	srl	96	80.795	Ictalurus_punctatus
ENSPEMG00000015842	Srl	100	97.458	ENSSTOG00000021151	-	100	97.458	Ictidomys_tridecemlineatus
ENSPEMG00000015842	Srl	100	97.881	ENSJJAG00000016400	Srl	100	97.881	Jaculus_jaculus
ENSPEMG00000015842	Srl	98	80.952	ENSKMAG00000014115	srl	93	85.511	Kryptolebias_marmoratus
ENSPEMG00000015842	Srl	93	75.964	ENSKMAG00000019537	SRL	100	75.964	Kryptolebias_marmoratus
ENSPEMG00000015842	Srl	96	74.123	ENSLBEG00000013811	SRL	98	74.123	Labrus_bergylta
ENSPEMG00000015842	Srl	100	80.932	ENSLBEG00000026643	srl	96	81.978	Labrus_bergylta
ENSPEMG00000015842	Srl	96	86.283	ENSLACG00000002825	SRL	99	86.283	Latimeria_chalumnae
ENSPEMG00000015842	Srl	99	82.340	ENSLOCG00000002644	srl	96	84.292	Lepisosteus_oculatus
ENSPEMG00000015842	Srl	96	96.681	ENSLAFG00000006329	SRL	51	96.681	Loxodonta_africana
ENSPEMG00000015842	Srl	91	97.216	ENSMFAG00000037383	SRL	100	97.216	Macaca_fascicularis
ENSPEMG00000015842	Srl	98	95.445	ENSMNEG00000019236	-	96	96.460	Macaca_nemestrina
ENSPEMG00000015842	Srl	100	87.949	ENSMLEG00000032156	SRL	96	88.377	Mandrillus_leucophaeus
ENSPEMG00000015842	Srl	93	73.568	ENSMAMG00000013756	SRL	53	73.568	Mastacembelus_armatus
ENSPEMG00000015842	Srl	99	79.787	ENSMAMG00000023322	srl	94	83.710	Mastacembelus_armatus
ENSPEMG00000015842	Srl	98	81.720	ENSMZEG00005004548	srl	98	82.889	Maylandia_zebra
ENSPEMG00000015842	Srl	94	72.527	ENSMZEG00005004010	SRL	57	72.747	Maylandia_zebra
ENSPEMG00000015842	Srl	96	90.244	ENSMGAG00000009342	SRL	95	91.755	Meleagris_gallopavo
ENSPEMG00000015842	Srl	96	96.491	ENSMICG00000032307	SRL	96	96.491	Microcebus_murinus
ENSPEMG00000015842	Srl	100	98.517	ENSMOCG00000008208	Srl	100	98.517	Microtus_ochrogaster
ENSPEMG00000015842	Srl	94	83.484	ENSMMOG00000013970	srl	98	83.484	Mola_mola
ENSPEMG00000015842	Srl	93	72.807	ENSMMOG00000021572	SRL	99	72.747	Mola_mola
ENSPEMG00000015842	Srl	96	96.026	ENSMODG00000016380	-	51	96.026	Monodelphis_domestica
ENSPEMG00000015842	Srl	89	75.656	ENSMALG00000000670	SRL	98	74.463	Monopterus_albus
ENSPEMG00000015842	Srl	100	80.550	ENSMALG00000005039	srl	98	82.805	Monopterus_albus
ENSPEMG00000015842	Srl	100	98.093	MGP_CAROLIEiJ_G0020400	Srl	100	98.093	Mus_caroli
ENSPEMG00000015842	Srl	100	98.093	ENSMUSG00000022519	Srl	100	98.093	Mus_musculus
ENSPEMG00000015842	Srl	100	98.093	MGP_SPRETEiJ_G0021294	Srl	100	98.093	Mus_spretus
ENSPEMG00000015842	Srl	96	97.124	ENSMPUG00000015025	SRL	55	97.124	Mustela_putorius_furo
ENSPEMG00000015842	Srl	96	97.124	ENSMLUG00000030733	SRL	57	97.124	Myotis_lucifugus
ENSPEMG00000015842	Srl	100	98.093	ENSNGAG00000019741	Srl	100	98.093	Nannospalax_galili
ENSPEMG00000015842	Srl	94	72.527	ENSNBRG00000002422	SRL	62	69.474	Neolamprologus_brichardi
ENSPEMG00000015842	Srl	98	81.720	ENSNBRG00000023775	srl	96	82.743	Neolamprologus_brichardi
ENSPEMG00000015842	Srl	100	89.006	ENSNLEG00000029051	SRL	96	89.693	Nomascus_leucogenys
ENSPEMG00000015842	Srl	97	90.870	ENSOPRG00000000477	-	53	91.630	Ochotona_princeps
ENSPEMG00000015842	Srl	100	97.034	ENSODEG00000013256	SRL	100	97.034	Octodon_degus
ENSPEMG00000015842	Srl	99	80.255	ENSONIG00000005192	srl	96	82.522	Oreochromis_niloticus
ENSPEMG00000015842	Srl	97	96.522	ENSOCUG00000025140	SRL	51	96.522	Oryctolagus_cuniculus
ENSPEMG00000015842	Srl	96	74.279	ENSORLG00000015064	SRL	98	74.279	Oryzias_latipes
ENSPEMG00000015842	Srl	100	80.085	ENSORLG00000008291	srl	92	85.052	Oryzias_latipes
ENSPEMG00000015842	Srl	96	74.501	ENSORLG00020018173	SRL	98	74.501	Oryzias_latipes_hni
ENSPEMG00000015842	Srl	100	80.297	ENSORLG00020019784	srl	79	85.309	Oryzias_latipes_hni
ENSPEMG00000015842	Srl	96	74.723	ENSORLG00015019063	SRL	98	74.723	Oryzias_latipes_hsok
ENSPEMG00000015842	Srl	100	79.873	ENSORLG00015009342	srl	93	81.057	Oryzias_latipes_hsok
ENSPEMG00000015842	Srl	100	80.085	ENSOMEG00000010006	srl	98	82.955	Oryzias_melastigma
ENSPEMG00000015842	Srl	94	72.867	ENSOMEG00000005682	SRL	53	72.867	Oryzias_melastigma
ENSPEMG00000015842	Srl	96	96.696	ENSOGAG00000029266	SRL	55	96.696	Otolemur_garnettii
ENSPEMG00000015842	Srl	99	94.839	ENSOARG00000003074	SRL	57	96.231	Ovis_aries
ENSPEMG00000015842	Srl	97	96.288	ENSPPAG00000024919	-	100	97.216	Pan_paniscus
ENSPEMG00000015842	Srl	100	94.926	ENSPPRG00000010274	SRL	100	97.680	Panthera_pardus
ENSPEMG00000015842	Srl	100	94.926	ENSPTIG00000015162	SRL	100	97.680	Panthera_tigris_altaica
ENSPEMG00000015842	Srl	100	95.560	ENSPTRG00000007712	SRL	100	97.216	Pan_troglodytes
ENSPEMG00000015842	Srl	98	95.662	ENSPANG00000013804	SRL	97	96.681	Papio_anubis
ENSPEMG00000015842	Srl	98	82.403	ENSPKIG00000006405	srl	93	84.615	Paramormyrops_kingsleyae
ENSPEMG00000015842	Srl	100	73.941	ENSPKIG00000024974	SRL	91	74.725	Paramormyrops_kingsleyae
ENSPEMG00000015842	Srl	96	90.088	ENSPSIG00000008586	SRL	51	90.088	Pelodiscus_sinensis
ENSPEMG00000015842	Srl	94	73.756	ENSPMGG00000023505	-	99	73.529	Periophthalmus_magnuspinnatus
ENSPEMG00000015842	Srl	96	83.002	ENSPMGG00000021081	srl	97	83.002	Periophthalmus_magnuspinnatus
ENSPEMG00000015842	Srl	89	68.578	ENSPMAG00000004786	srl	99	68.349	Petromyzon_marinus
ENSPEMG00000015842	Srl	96	95.787	ENSPCIG00000012128	SRL	98	95.787	Phascolarctos_cinereus
ENSPEMG00000015842	Srl	100	78.926	ENSPFOG00000011408	srl	94	81.360	Poecilia_formosa
ENSPEMG00000015842	Srl	94	76.244	ENSPLAG00000002932	SRL	98	75.113	Poecilia_latipinna
ENSPEMG00000015842	Srl	97	81.481	ENSPLAG00000008017	srl	97	83.146	Poecilia_latipinna
ENSPEMG00000015842	Srl	94	73.961	ENSPMEG00000005890	SRL	59	72.867	Poecilia_mexicana
ENSPEMG00000015842	Srl	100	80.720	ENSPMEG00000006745	srl	97	83.146	Poecilia_mexicana
ENSPEMG00000015842	Srl	100	80.297	ENSPREG00000007751	srl	99	82.921	Poecilia_reticulata
ENSPEMG00000015842	Srl	94	77.149	ENSPREG00000000315	SRL	98	76.018	Poecilia_reticulata
ENSPEMG00000015842	Srl	89	97.375	ENSPPYG00000007053	SRL	98	97.375	Pongo_abelii
ENSPEMG00000015842	Srl	96	95.143	ENSPCAG00000003378	-	51	95.143	Procavia_capensis
ENSPEMG00000015842	Srl	97	96.070	ENSPCOG00000023135	SRL	100	96.984	Propithecus_coquereli
ENSPEMG00000015842	Srl	96	97.124	ENSPVAG00000006586	SRL	56	97.124	Pteropus_vampyrus
ENSPEMG00000015842	Srl	98	81.720	ENSPNYG00000001200	srl	98	82.889	Pundamilia_nyererei
ENSPEMG00000015842	Srl	94	72.527	ENSPNYG00000003423	SRL	57	72.747	Pundamilia_nyererei
ENSPEMG00000015842	Srl	99	72.281	ENSPNAG00000007361	-	93	73.568	Pygocentrus_nattereri
ENSPEMG00000015842	Srl	100	79.025	ENSPNAG00000023106	srl	94	82.353	Pygocentrus_nattereri
ENSPEMG00000015842	Srl	97	97.598	ENSRNOG00000005269	Srl	51	97.598	Rattus_norvegicus
ENSPEMG00000015842	Srl	97	95.435	ENSRBIG00000042358	SRL	50	96.476	Rhinopithecus_bieti
ENSPEMG00000015842	Srl	94	97.065	ENSSBOG00000029273	SRL	96	96.272	Saimiri_boliviensis_boliviensis
ENSPEMG00000015842	Srl	97	95.395	ENSSHAG00000011715	-	51	96.231	Sarcophilus_harrisii
ENSPEMG00000015842	Srl	94	76.697	ENSSFOG00015021327	SRL	50	75.885	Scleropages_formosus
ENSPEMG00000015842	Srl	100	78.512	ENSSFOG00015009773	srl	97	82.819	Scleropages_formosus
ENSPEMG00000015842	Srl	100	80.761	ENSSMAG00000016274	srl	98	82.667	Scophthalmus_maximus
ENSPEMG00000015842	Srl	93	73.085	ENSSMAG00000002232	SRL	50	71.868	Scophthalmus_maximus
ENSPEMG00000015842	Srl	94	74.610	ENSSDUG00000009161	SRL	98	74.610	Seriola_dumerili
ENSPEMG00000015842	Srl	94	84.163	ENSSDUG00000010808	srl	97	84.163	Seriola_dumerili
ENSPEMG00000015842	Srl	94	74.179	ENSSLDG00000014601	SRL	99	73.523	Seriola_lalandi_dorsalis
ENSPEMG00000015842	Srl	96	83.002	ENSSLDG00000022024	srl	95	84.163	Seriola_lalandi_dorsalis
ENSPEMG00000015842	Srl	96	90.044	ENSSPUG00000016859	SRL	99	90.044	Sphenodon_punctatus
ENSPEMG00000015842	Srl	93	76.417	ENSSPAG00000014254	SRL	98	75.283	Stegastes_partitus
ENSPEMG00000015842	Srl	100	81.356	ENSSPAG00000019105	srl	96	83.002	Stegastes_partitus
ENSPEMG00000015842	Srl	96	95.806	ENSSSCG00000007949	SRL	99	96.205	Sus_scrofa
ENSPEMG00000015842	Srl	77	91.989	ENSTGUG00000016121	-	96	92.816	Taeniopygia_guttata
ENSPEMG00000015842	Srl	96	89.011	ENSTGUG00000003951	-	99	89.579	Taeniopygia_guttata
ENSPEMG00000015842	Srl	100	81.356	ENSTRUG00000006005	srl	97	82.379	Takifugu_rubripes
ENSPEMG00000015842	Srl	89	75.418	ENSTRUG00000013310	SRL	55	75.179	Takifugu_rubripes
ENSPEMG00000015842	Srl	96	82.159	ENSTNIG00000009739	srl	97	82.159	Tetraodon_nigroviridis
ENSPEMG00000015842	Srl	96	97.788	ENSUAMG00000005701	SRL	56	97.788	Ursus_americanus
ENSPEMG00000015842	Srl	96	97.566	ENSUMAG00000002574	SRL	56	97.566	Ursus_maritimus
ENSPEMG00000015842	Srl	96	97.137	ENSVVUG00000016331	-	50	97.137	Vulpes_vulpes
ENSPEMG00000015842	Srl	96	88.717	ENSXETG00000017313	srl	100	88.717	Xenopus_tropicalis
ENSPEMG00000015842	Srl	89	85.036	ENSXCOG00000010424	srl	97	85.036	Xiphophorus_couchianus
ENSPEMG00000015842	Srl	96	75.610	ENSXCOG00000014584	SRL	100	74.501	Xiphophorus_couchianus
ENSPEMG00000015842	Srl	94	74.066	ENSXMAG00000027598	SRL	62	74.066	Xiphophorus_maculatus
ENSPEMG00000015842	Srl	100	80.508	ENSXMAG00000004625	srl	92	81.938	Xiphophorus_maculatus