EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000016015 (Gene tree)
Gene ID: 102907856
Gene Symbol: Safb2
Alias: -
Full Name: scaffold attachment factor B2
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 21140 bases
Position: chrKI615491.1:1057647-1078786
Accession: 102907856
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000016979	RRM_1	PF00076.22	2e-13	1	1
ENSPEMP00000016967	RRM_1	PF00076.22	5.8e-05	1	1
ENSPEMP00000016979	SAP	PF02037.27	1.3e-10	1	1
ENSPEMP00000016967	SAP	PF02037.27	1.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000021299	-	756	-	ENSPEMP00000016984	251 (aa)	-	-
ENSPEMT00000021294	-	2925	XM_006982257	ENSPEMP00000016979	974 (aa)	XP_006982319	-
ENSPEMT00000021281	-	2928	-	ENSPEMP00000016967	975 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000016015's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000016015's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000016015	Safb2	64	66.202	ENSPEMG00000020428	Safb	100	60.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000016015	Safb2	100	67.398	ENSG00000130254	SAFB2	100	67.697	Homo_sapiens
ENSPEMG00000016015	Safb2	100	65.265	ENSAMEG00000012146	SAFB2	100	66.366	Ailuropoda_melanoleuca
ENSPEMG00000016015	Safb2	100	67.896	ENSANAG00000031936	SAFB2	100	68.096	Aotus_nancymaae
ENSPEMG00000016015	Safb2	100	65.165	ENSBTAG00000001790	SAFB2	100	65.265	Bos_taurus
ENSPEMG00000016015	Safb2	100	67.065	ENSCAFG00000018814	SAFB2	100	67.264	Canis_familiaris
ENSPEMG00000016015	Safb2	100	67.065	ENSCAFG00020018939	SAFB2	100	67.264	Canis_lupus_dingo
ENSPEMG00000016015	Safb2	100	63.463	ENSCHIG00000024547	SAFB2	100	64.665	Capra_hircus
ENSPEMG00000016015	Safb2	94	53.903	ENSCAPG00000011771	SAFB2	100	56.568	Cavia_aperea
ENSPEMG00000016015	Safb2	100	65.183	ENSCPOG00000011394	SAFB2	100	65.678	Cavia_porcellus
ENSPEMG00000016015	Safb2	100	67.632	ENSCCAG00000017348	SAFB2	100	67.832	Cebus_capucinus
ENSPEMG00000016015	Safb2	100	66.600	ENSCATG00000039497	SAFB2	100	66.899	Cercocebus_atys
ENSPEMG00000016015	Safb2	100	67.498	ENSCSAG00000009959	SAFB2	100	67.797	Chlorocebus_sabaeus
ENSPEMG00000016015	Safb2	77	60.610	ENSCHOG00000010684	SAFB2	99	60.743	Choloepus_hoffmanni
ENSPEMG00000016015	Safb2	100	63.855	ENSCANG00000024675	SAFB2	100	64.513	Colobus_angolensis_palliatus
ENSPEMG00000016015	Safb2	100	87.576	ENSCGRG00001015833	Safb2	100	87.374	Cricetulus_griseus_chok1gshd
ENSPEMG00000016015	Safb2	100	87.576	ENSCGRG00000011131	Safb2	100	87.374	Cricetulus_griseus_crigri
ENSPEMG00000016015	Safb2	97	62.409	ENSDORG00000016199	Safb2	100	64.419	Dipodomys_ordii
ENSPEMG00000016015	Safb2	91	65.991	ENSEASG00005022952	SAFB2	91	65.991	Equus_asinus_asinus
ENSPEMG00000016015	Safb2	98	65.679	ENSECAG00000018978	SAFB2	100	65.792	Equus_caballus
ENSPEMG00000016015	Safb2	100	66.335	ENSFCAG00000011834	SAFB2	100	67.032	Felis_catus
ENSPEMG00000016015	Safb2	93	67.012	ENSFDAG00000020009	SAFB2	100	67.119	Fukomys_damarensis
ENSPEMG00000016015	Safb2	99	66.196	ENSGGOG00000015093	SAFB2	100	65.213	Gorilla_gorilla
ENSPEMG00000016015	Safb2	100	70.448	ENSHGLG00000017442	SAFB2	100	70.448	Heterocephalus_glaber_female
ENSPEMG00000016015	Safb2	99	64.386	ENSLAFG00000003836	SAFB2	99	63.819	Loxodonta_africana
ENSPEMG00000016015	Safb2	100	67.498	ENSMFAG00000039706	SAFB2	100	67.797	Macaca_fascicularis
ENSPEMG00000016015	Safb2	100	67.597	ENSMMUG00000017968	SAFB2	100	67.896	Macaca_mulatta
ENSPEMG00000016015	Safb2	100	62.375	ENSMNEG00000032042	SAFB2	100	63.267	Macaca_nemestrina
ENSPEMG00000016015	Safb2	100	67.498	ENSMLEG00000034562	SAFB2	100	67.797	Mandrillus_leucophaeus
ENSPEMG00000016015	Safb2	83	87.391	ENSMAUG00000011573	Safb2	95	87.040	Mesocricetus_auratus
ENSPEMG00000016015	Safb2	100	67.197	ENSMICG00000008711	SAFB2	100	67.296	Microcebus_murinus
ENSPEMG00000016015	Safb2	100	84.709	ENSMOCG00000006827	Safb2	100	84.404	Microtus_ochrogaster
ENSPEMG00000016015	Safb2	98	58.081	ENSMODG00000001178	SAFB2	100	57.848	Monodelphis_domestica
ENSPEMG00000016015	Safb2	100	82.300	MGP_CAROLIEiJ_G0021779	Safb2	100	82.000	Mus_caroli
ENSPEMG00000016015	Safb2	100	81.882	ENSMUSG00000042625	Safb2	100	82.683	Mus_musculus
ENSPEMG00000016015	Safb2	100	81.827	MGP_PahariEiJ_G0020768	Safb2	100	81.627	Mus_pahari
ENSPEMG00000016015	Safb2	93	79.972	MGP_SPRETEiJ_G0022690	Safb2	100	80.392	Mus_spretus
ENSPEMG00000016015	Safb2	100	67.298	ENSMPUG00000006106	SAFB2	93	67.498	Mustela_putorius_furo
ENSPEMG00000016015	Safb2	100	63.933	ENSMLUG00000001050	SAFB2	100	62.747	Myotis_lucifugus
ENSPEMG00000016015	Safb2	100	67.099	ENSNLEG00000013514	SAFB2	100	67.398	Nomascus_leucogenys
ENSPEMG00000016015	Safb2	94	54.797	ENSMEUG00000002456	SAFB2	100	54.904	Notamacropus_eugenii
ENSPEMG00000016015	Safb2	100	60.973	ENSOPRG00000011523	-	100	61.172	Ochotona_princeps
ENSPEMG00000016015	Safb2	100	66.238	ENSODEG00000014751	SAFB2	100	66.304	Octodon_degus
ENSPEMG00000016015	Safb2	100	66.302	ENSOGAG00000006855	SAFB2	100	66.634	Otolemur_garnettii
ENSPEMG00000016015	Safb2	98	56.384	ENSOARG00000007982	SAFB2	67	63.801	Ovis_aries
ENSPEMG00000016015	Safb2	100	67.597	ENSPPAG00000043392	SAFB2	100	67.896	Pan_paniscus
ENSPEMG00000016015	Safb2	100	66.335	ENSPPRG00000011310	SAFB2	100	67.032	Panthera_pardus
ENSPEMG00000016015	Safb2	78	63.987	ENSPTIG00000015120	SAFB2	90	65.997	Panthera_tigris_altaica
ENSPEMG00000016015	Safb2	100	62.475	ENSPTRG00000010334	SAFB2	100	63.210	Pan_troglodytes
ENSPEMG00000016015	Safb2	100	67.398	ENSPANG00000007004	SAFB2	100	67.697	Papio_anubis
ENSPEMG00000016015	Safb2	61	66.162	ENSPCIG00000009518	-	95	72.407	Phascolarctos_cinereus
ENSPEMG00000016015	Safb2	100	67.498	ENSPPYG00000009427	SAFB2	100	67.797	Pongo_abelii
ENSPEMG00000016015	Safb2	100	63.137	ENSPCAG00000006352	SAFB2	100	63.337	Procavia_capensis
ENSPEMG00000016015	Safb2	100	66.933	ENSPCOG00000023260	SAFB2	100	67.033	Propithecus_coquereli
ENSPEMG00000016015	Safb2	59	78.261	ENSPVAG00000004902	-	74	78.261	Pteropus_vampyrus
ENSPEMG00000016015	Safb2	82	77.897	ENSRNOG00000049511	AABR07066522.1	99	77.712	Rattus_norvegicus
ENSPEMG00000016015	Safb2	85	69.545	ENSRBIG00000033446	SAFB2	100	70.016	Rhinopithecus_bieti
ENSPEMG00000016015	Safb2	100	67.498	ENSRROG00000006606	SAFB2	100	67.797	Rhinopithecus_roxellana
ENSPEMG00000016015	Safb2	100	67.066	ENSSBOG00000032315	SAFB2	100	67.508	Saimiri_boliviensis_boliviensis
ENSPEMG00000016015	Safb2	97	57.981	ENSSHAG00000012703	SAFB2	99	57.302	Sarcophilus_harrisii
ENSPEMG00000016015	Safb2	83	58.068	ENSSARG00000000649	SAFB2	99	59.585	Sorex_araneus
ENSPEMG00000016015	Safb2	100	66.766	ENSSSCG00000013523	SAFB2	100	67.363	Sus_scrofa
ENSPEMG00000016015	Safb2	69	59.578	ENSTBEG00000012709	SAFB2	74	59.402	Tupaia_belangeri
ENSPEMG00000016015	Safb2	94	61.620	ENSTTRG00000013585	SAFB2	93	61.874	Tursiops_truncatus
ENSPEMG00000016015	Safb2	99	67.477	ENSUAMG00000024695	SAFB2	99	67.467	Ursus_americanus
ENSPEMG00000016015	Safb2	85	64.537	ENSUMAG00000009585	SAFB2	88	66.134	Ursus_maritimus
ENSPEMG00000016015	Safb2	75	73.711	ENSVPAG00000012041	SAFB2	89	73.711	Vicugna_pacos
ENSPEMG00000016015	Safb2	100	67.264	ENSVVUG00000013695	SAFB2	100	67.463	Vulpes_vulpes