EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000016036 (Gene tree)
Gene ID: 102918848
Gene Symbol: Prpf6
Alias: -
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 89082 bases
Position: chrKI616090.1:231586-320667
Accession: 102918848
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000016993	PRP1_N	PF06424.12	1.7e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000021308	-	3072	XM_006994585	ENSPEMP00000016993	941 (aa)	XP_006994647	UPI00042AF783

Gene Model

Click here to download ENSPEMG00000016036's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000016036's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000016036	Prpf6	100	98.193	ENSG00000101161	PRPF6	100	98.193	Homo_sapiens
ENSPEMG00000016036	Prpf6	100	93.199	ENSAPOG00000010395	prpf6	96	93.624	Acanthochromis_polyacanthus
ENSPEMG00000016036	Prpf6	100	97.346	ENSAMEG00000001916	PRPF6	99	97.346	Ailuropoda_melanoleuca
ENSPEMG00000016036	Prpf6	100	92.880	ENSACIG00000019862	prpf6	96	93.305	Amphilophus_citrinellus
ENSPEMG00000016036	Prpf6	100	93.092	ENSAOCG00000012988	prpf6	96	93.518	Amphiprion_ocellaris
ENSPEMG00000016036	Prpf6	100	86.397	ENSAPEG00000008301	prpf6	100	86.929	Amphiprion_percula
ENSPEMG00000016036	Prpf6	100	92.561	ENSATEG00000005581	prpf6	96	92.986	Anabas_testudineus
ENSPEMG00000016036	Prpf6	100	97.981	ENSACAG00000006464	PRPF6	95	97.981	Anolis_carolinensis
ENSPEMG00000016036	Prpf6	100	98.300	ENSANAG00000012661	PRPF6	100	98.822	Aotus_nancymaae
ENSPEMG00000016036	Prpf6	100	92.774	ENSACLG00000025875	prpf6	96	93.199	Astatotilapia_calliptera
ENSPEMG00000016036	Prpf6	99	93.298	ENSAMXG00000001929	prpf6	96	93.723	Astyanax_mexicanus
ENSPEMG00000016036	Prpf6	100	98.300	ENSBTAG00000011656	PRPF6	100	98.300	Bos_taurus
ENSPEMG00000016036	Prpf6	100	98.300	ENSCJAG00000010616	PRPF6	100	98.300	Callithrix_jacchus
ENSPEMG00000016036	Prpf6	100	98.618	ENSCAFG00000013165	PRPF6	100	98.618	Canis_familiaris
ENSPEMG00000016036	Prpf6	100	98.618	ENSCAFG00020002050	PRPF6	100	98.618	Canis_lupus_dingo
ENSPEMG00000016036	Prpf6	100	98.300	ENSCHIG00000018187	PRPF6	100	98.300	Capra_hircus
ENSPEMG00000016036	Prpf6	100	99.044	ENSTSYG00000007814	PRPF6	100	99.044	Carlito_syrichta
ENSPEMG00000016036	Prpf6	97	98.255	ENSCAPG00000015077	PRPF6	100	98.255	Cavia_aperea
ENSPEMG00000016036	Prpf6	100	99.575	ENSCPOG00000007518	PRPF6	100	99.575	Cavia_porcellus
ENSPEMG00000016036	Prpf6	100	95.112	ENSCCAG00000024564	PRPF6	100	95.112	Cebus_capucinus
ENSPEMG00000016036	Prpf6	100	98.087	ENSCATG00000037473	PRPF6	100	98.087	Cercocebus_atys
ENSPEMG00000016036	Prpf6	100	95.537	ENSCLAG00000003854	PRPF6	100	95.537	Chinchilla_lanigera
ENSPEMG00000016036	Prpf6	100	93.031	ENSCSAG00000016742	PRPF6	100	93.031	Chlorocebus_sabaeus
ENSPEMG00000016036	Prpf6	85	81.301	ENSCHOG00000003315	-	100	81.301	Choloepus_hoffmanni
ENSPEMG00000016036	Prpf6	100	98.087	ENSCPBG00000013964	PRPF6	96	98.087	Chrysemys_picta_bellii
ENSPEMG00000016036	Prpf6	99	73.573	ENSCING00000008817	-	99	73.573	Ciona_intestinalis
ENSPEMG00000016036	Prpf6	100	98.087	ENSCANG00000038230	PRPF6	100	98.087	Colobus_angolensis_palliatus
ENSPEMG00000016036	Prpf6	100	99.787	ENSCGRG00001022666	Prpf6	100	99.787	Cricetulus_griseus_chok1gshd
ENSPEMG00000016036	Prpf6	100	87.354	ENSCSEG00000018561	prpf6	100	87.779	Cynoglossus_semilaevis
ENSPEMG00000016036	Prpf6	100	93.092	ENSCVAG00000010550	prpf6	96	93.518	Cyprinodon_variegatus
ENSPEMG00000016036	Prpf6	100	92.667	ENSDARG00000091367	prpf6	99	93.092	Danio_rerio
ENSPEMG00000016036	Prpf6	100	97.662	ENSDNOG00000040544	PRPF6	100	97.662	Dasypus_novemcinctus
ENSPEMG00000016036	Prpf6	91	98.248	ENSDORG00000005406	Prpf6	100	98.248	Dipodomys_ordii
ENSPEMG00000016036	Prpf6	99	71.905	FBgn0036828	CG6841	98	72.210	Drosophila_melanogaster
ENSPEMG00000016036	Prpf6	85	95.760	ENSETEG00000004447	PRPF6	85	95.760	Echinops_telfairi
ENSPEMG00000016036	Prpf6	99	87.169	ENSEBUG00000008835	prpf6	99	87.169	Eptatretus_burgeri
ENSPEMG00000016036	Prpf6	100	98.406	ENSEASG00005023115	PRPF6	100	98.406	Equus_asinus_asinus
ENSPEMG00000016036	Prpf6	100	94.155	ENSECAG00000013983	PRPF6	100	94.155	Equus_caballus
ENSPEMG00000016036	Prpf6	90	100.000	ENSEEUG00000000180	PRPF6	82	100.000	Erinaceus_europaeus
ENSPEMG00000016036	Prpf6	100	91.605	ENSELUG00000001945	prpf6	93	91.605	Esox_lucius
ENSPEMG00000016036	Prpf6	100	98.406	ENSFCAG00000001183	PRPF6	100	98.406	Felis_catus
ENSPEMG00000016036	Prpf6	100	90.329	ENSFALG00000006046	-	97	90.329	Ficedula_albicollis
ENSPEMG00000016036	Prpf6	100	97.981	ENSFALG00000010326	-	97	97.981	Ficedula_albicollis
ENSPEMG00000016036	Prpf6	100	98.087	ENSFDAG00000006451	PRPF6	100	99.546	Fukomys_damarensis
ENSPEMG00000016036	Prpf6	100	93.730	ENSFHEG00000000560	prpf6	96	93.730	Fundulus_heteroclitus
ENSPEMG00000016036	Prpf6	100	89.535	ENSGMOG00000015622	prpf6	99	89.535	Gadus_morhua
ENSPEMG00000016036	Prpf6	100	97.981	ENSGALG00000006001	PRPF6	100	97.981	Gallus_gallus
ENSPEMG00000016036	Prpf6	100	88.417	ENSGAFG00000021109	prpf6	96	88.842	Gambusia_affinis
ENSPEMG00000016036	Prpf6	100	91.605	ENSGACG00000002576	prpf6	99	91.605	Gasterosteus_aculeatus
ENSPEMG00000016036	Prpf6	100	97.981	ENSGAGG00000008653	PRPF6	96	97.981	Gopherus_agassizii
ENSPEMG00000016036	Prpf6	100	98.193	ENSGGOG00000016876	PRPF6	100	98.193	Gorilla_gorilla
ENSPEMG00000016036	Prpf6	100	92.774	ENSHBUG00000004496	prpf6	96	93.199	Haplochromis_burtoni
ENSPEMG00000016036	Prpf6	100	99.362	ENSHGLG00000009222	PRPF6	100	99.362	Heterocephalus_glaber_female
ENSPEMG00000016036	Prpf6	97	99.346	ENSHGLG00100016600	PRPF6	100	99.346	Heterocephalus_glaber_male
ENSPEMG00000016036	Prpf6	100	91.605	ENSHCOG00000011513	prpf6	96	92.030	Hippocampus_comes
ENSPEMG00000016036	Prpf6	100	93.836	ENSIPUG00000004912	prpf6	96	93.836	Ictalurus_punctatus
ENSPEMG00000016036	Prpf6	100	96.603	ENSSTOG00000002922	PRPF6	100	96.603	Ictidomys_tridecemlineatus
ENSPEMG00000016036	Prpf6	100	99.362	ENSJJAG00000000836	Prpf6	100	99.362	Jaculus_jaculus
ENSPEMG00000016036	Prpf6	100	92.561	ENSKMAG00000017800	prpf6	96	92.986	Kryptolebias_marmoratus
ENSPEMG00000016036	Prpf6	100	92.242	ENSLBEG00000012582	prpf6	96	92.242	Labrus_bergylta
ENSPEMG00000016036	Prpf6	100	94.793	ENSLOCG00000004827	prpf6	96	93.836	Lepisosteus_oculatus
ENSPEMG00000016036	Prpf6	100	98.087	ENSLAFG00000005272	PRPF6	100	98.087	Loxodonta_africana
ENSPEMG00000016036	Prpf6	100	98.087	ENSMFAG00000037542	PRPF6	100	98.087	Macaca_fascicularis
ENSPEMG00000016036	Prpf6	100	91.507	ENSMMUG00000015558	PRPF6	98	99.480	Macaca_mulatta
ENSPEMG00000016036	Prpf6	100	84.004	ENSMNEG00000045555	PRPF6	100	84.004	Macaca_nemestrina
ENSPEMG00000016036	Prpf6	100	92.880	ENSMAMG00000010718	prpf6	96	93.305	Mastacembelus_armatus
ENSPEMG00000016036	Prpf6	100	92.251	ENSMZEG00005015261	-	99	92.675	Maylandia_zebra
ENSPEMG00000016036	Prpf6	94	92.290	ENSMZEG00005026539	prpf6	100	92.744	Maylandia_zebra
ENSPEMG00000016036	Prpf6	97	97.928	ENSMGAG00000006634	PRPF6	100	97.928	Meleagris_gallopavo
ENSPEMG00000016036	Prpf6	100	99.894	ENSMAUG00000013969	Prpf6	100	99.894	Mesocricetus_auratus
ENSPEMG00000016036	Prpf6	87	98.418	ENSMICG00000017793	PRPF6	99	98.418	Microcebus_murinus
ENSPEMG00000016036	Prpf6	100	99.787	ENSMOCG00000001701	Prpf6	100	99.787	Microtus_ochrogaster
ENSPEMG00000016036	Prpf6	100	91.923	ENSMMOG00000020419	prpf6	100	92.349	Mola_mola
ENSPEMG00000016036	Prpf6	99	98.644	ENSMODG00000017051	PRPF6	99	98.644	Monodelphis_domestica
ENSPEMG00000016036	Prpf6	99	93.018	ENSMALG00000000089	prpf6	100	93.018	Monopterus_albus
ENSPEMG00000016036	Prpf6	100	93.092	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSPEMG00000016036	Prpf6	100	99.787	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSPEMG00000016036	Prpf6	100	99.894	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSPEMG00000016036	Prpf6	100	99.787	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSPEMG00000016036	Prpf6	91	98.212	ENSMPUG00000008673	PRPF6	99	98.212	Mustela_putorius_furo
ENSPEMG00000016036	Prpf6	100	99.681	ENSNGAG00000003365	Prpf6	100	99.681	Nannospalax_galili
ENSPEMG00000016036	Prpf6	100	92.880	ENSNBRG00000015025	prpf6	96	93.305	Neolamprologus_brichardi
ENSPEMG00000016036	Prpf6	100	98.087	ENSNLEG00000010208	PRPF6	100	98.087	Nomascus_leucogenys
ENSPEMG00000016036	Prpf6	100	88.353	ENSMEUG00000009824	-	90	88.538	Notamacropus_eugenii
ENSPEMG00000016036	Prpf6	100	93.518	ENSODEG00000004841	PRPF6	100	93.518	Octodon_degus
ENSPEMG00000016036	Prpf6	100	92.774	ENSONIG00000017406	prpf6	96	93.199	Oreochromis_niloticus
ENSPEMG00000016036	Prpf6	100	98.300	ENSOANG00000004920	PRPF6	100	98.300	Ornithorhynchus_anatinus
ENSPEMG00000016036	Prpf6	99	97.103	ENSOCUG00000014151	PRPF6	100	97.103	Oryctolagus_cuniculus
ENSPEMG00000016036	Prpf6	100	92.561	ENSORLG00000009592	prpf6	96	92.561	Oryzias_latipes
ENSPEMG00000016036	Prpf6	100	92.667	ENSORLG00020001458	prpf6	96	92.667	Oryzias_latipes_hni
ENSPEMG00000016036	Prpf6	100	92.667	ENSORLG00015018762	prpf6	96	92.667	Oryzias_latipes_hsok
ENSPEMG00000016036	Prpf6	100	92.561	ENSOMEG00000012174	prpf6	96	92.986	Oryzias_melastigma
ENSPEMG00000016036	Prpf6	100	91.507	ENSOGAG00000007573	PRPF6	100	91.507	Otolemur_garnettii
ENSPEMG00000016036	Prpf6	100	97.875	ENSOARG00000008776	PRPF6	99	97.875	Ovis_aries
ENSPEMG00000016036	Prpf6	100	98.193	ENSPPAG00000008686	PRPF6	100	98.193	Pan_paniscus
ENSPEMG00000016036	Prpf6	100	98.406	ENSPPRG00000008497	PRPF6	100	98.406	Panthera_pardus
ENSPEMG00000016036	Prpf6	97	98.364	ENSPTIG00000011184	PRPF6	97	98.364	Panthera_tigris_altaica
ENSPEMG00000016036	Prpf6	100	98.193	ENSPTRG00000013765	PRPF6	100	98.193	Pan_troglodytes
ENSPEMG00000016036	Prpf6	100	97.556	ENSPANG00000024135	PRPF6	100	97.556	Papio_anubis
ENSPEMG00000016036	Prpf6	100	94.368	ENSPKIG00000005627	prpf6	99	94.793	Paramormyrops_kingsleyae
ENSPEMG00000016036	Prpf6	94	98.186	ENSPSIG00000007717	PRPF6	100	98.186	Pelodiscus_sinensis
ENSPEMG00000016036	Prpf6	100	90.340	ENSPMGG00000008925	prpf6	96	90.552	Periophthalmus_magnuspinnatus
ENSPEMG00000016036	Prpf6	99	88.523	ENSPMAG00000006144	prpf6	99	88.523	Petromyzon_marinus
ENSPEMG00000016036	Prpf6	100	98.406	ENSPCIG00000017909	PRPF6	100	98.406	Phascolarctos_cinereus
ENSPEMG00000016036	Prpf6	100	93.305	ENSPFOG00000006431	prpf6	96	93.730	Poecilia_formosa
ENSPEMG00000016036	Prpf6	100	93.199	ENSPLAG00000005974	prpf6	96	93.624	Poecilia_latipinna
ENSPEMG00000016036	Prpf6	100	93.411	ENSPMEG00000009977	prpf6	96	93.836	Poecilia_mexicana
ENSPEMG00000016036	Prpf6	100	93.305	ENSPREG00000017993	prpf6	92	93.730	Poecilia_reticulata
ENSPEMG00000016036	Prpf6	100	97.662	ENSPPYG00000011256	PRPF6	100	97.662	Pongo_abelii
ENSPEMG00000016036	Prpf6	95	99.837	ENSPCAG00000006536	PRPF6	88	99.837	Procavia_capensis
ENSPEMG00000016036	Prpf6	100	98.406	ENSPCOG00000016881	PRPF6	100	98.406	Propithecus_coquereli
ENSPEMG00000016036	Prpf6	100	92.561	ENSPVAG00000014316	PRPF6	100	92.561	Pteropus_vampyrus
ENSPEMG00000016036	Prpf6	100	76.327	ENSPNYG00000001939	prpf6	96	81.615	Pundamilia_nyererei
ENSPEMG00000016036	Prpf6	100	93.518	ENSPNAG00000015606	prpf6	96	93.943	Pygocentrus_nattereri
ENSPEMG00000016036	Prpf6	100	99.787	ENSRNOG00000051498	Prpf6	100	99.787	Rattus_norvegicus
ENSPEMG00000016036	Prpf6	100	98.087	ENSRBIG00000043613	PRPF6	100	98.087	Rhinopithecus_bieti
ENSPEMG00000016036	Prpf6	100	94.921	ENSRROG00000040969	PRPF6	98	98.097	Rhinopithecus_roxellana
ENSPEMG00000016036	Prpf6	91	95.221	ENSSBOG00000020632	PRPF6	91	95.221	Saimiri_boliviensis_boliviensis
ENSPEMG00000016036	Prpf6	100	98.406	ENSSHAG00000016810	PRPF6	100	98.406	Sarcophilus_harrisii
ENSPEMG00000016036	Prpf6	99	94.629	ENSSFOG00015020859	prpf6	100	95.059	Scleropages_formosus
ENSPEMG00000016036	Prpf6	100	92.136	ENSSMAG00000008112	prpf6	96	92.136	Scophthalmus_maximus
ENSPEMG00000016036	Prpf6	100	92.774	ENSSDUG00000016142	prpf6	96	93.199	Seriola_dumerili
ENSPEMG00000016036	Prpf6	100	92.774	ENSSLDG00000025283	prpf6	100	89.692	Seriola_lalandi_dorsalis
ENSPEMG00000016036	Prpf6	94	96.712	ENSSPUG00000018260	PRPF6	100	96.712	Sphenodon_punctatus
ENSPEMG00000016036	Prpf6	100	92.774	ENSSPAG00000015850	prpf6	96	93.199	Stegastes_partitus
ENSPEMG00000016036	Prpf6	100	98.300	ENSSSCG00000029119	PRPF6	100	98.186	Sus_scrofa
ENSPEMG00000016036	Prpf6	100	98.087	ENSTGUG00000007221	PRPF6	99	98.087	Taeniopygia_guttata
ENSPEMG00000016036	Prpf6	100	91.711	ENSTRUG00000002920	prpf6	96	92.136	Takifugu_rubripes
ENSPEMG00000016036	Prpf6	100	85.412	ENSTNIG00000017873	prpf6	100	85.835	Tetraodon_nigroviridis
ENSPEMG00000016036	Prpf6	89	98.895	ENSTBEG00000005348	PRPF6	85	98.895	Tupaia_belangeri
ENSPEMG00000016036	Prpf6	100	97.981	ENSTTRG00000013068	PRPF6	100	97.981	Tursiops_truncatus
ENSPEMG00000016036	Prpf6	98	96.848	ENSUMAG00000021631	PRPF6	98	96.848	Ursus_maritimus
ENSPEMG00000016036	Prpf6	100	98.618	ENSVVUG00000014948	PRPF6	100	98.618	Vulpes_vulpes
ENSPEMG00000016036	Prpf6	100	96.599	ENSXETG00000012054	prpf6	97	96.599	Xenopus_tropicalis
ENSPEMG00000016036	Prpf6	100	93.411	ENSXCOG00000008082	prpf6	96	93.836	Xiphophorus_couchianus
ENSPEMG00000016036	Prpf6	100	93.411	ENSXMAG00000015581	prpf6	96	93.836	Xiphophorus_maculatus