EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000016247 (Gene tree)
Gene ID: 102906180
Gene Symbol: Trmt1
Alias: -
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 12411 bases
Position: chrKI616336.1:201469-213879
Accession: 102906180
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000017304	zf-CCCH	PF00642.24	6.2e-07	1	1
ENSPEMP00000017300	zf-CCCH	PF00642.24	6.6e-07	1	1
ENSPEMP00000017300	TRM	PF02005.16	2.6e-149	1	1
ENSPEMP00000017304	TRM	PF02005.16	5.1e-140	1	1
ENSPEMP00000017304	Met_10	PF02475.16	9.6e-06	1	1
ENSPEMP00000017300	Met_10	PF02475.16	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000021621	-	3200	XM_015989565	ENSPEMP00000017300	665 (aa)	XP_015845051	UPI00042AECB2
ENSPEMT00000021625	-	1911	-	ENSPEMP00000017304	636 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000016247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000016247's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000016247	Trmt1	96	86.557	ENSG00000104907	TRMT1	100	93.194	Homo_sapiens
ENSPEMG00000016247	Trmt1	100	82.883	ENSAMEG00000012598	TRMT1	96	84.341	Ailuropoda_melanoleuca
ENSPEMG00000016247	Trmt1	91	56.410	ENSACIG00000018680	trmt1	96	56.410	Amphilophus_citrinellus
ENSPEMG00000016247	Trmt1	88	65.077	ENSAOCG00000006781	trmt1	87	65.077	Amphiprion_ocellaris
ENSPEMG00000016247	Trmt1	87	65.858	ENSAPEG00000007712	trmt1	87	65.136	Amphiprion_percula
ENSPEMG00000016247	Trmt1	86	67.130	ENSATEG00000001872	trmt1	84	67.247	Anabas_testudineus
ENSPEMG00000016247	Trmt1	91	65.455	ENSACAG00000003825	TRMT1	96	65.289	Anolis_carolinensis
ENSPEMG00000016247	Trmt1	97	82.016	ENSANAG00000023016	TRMT1	98	85.386	Aotus_nancymaae
ENSPEMG00000016247	Trmt1	86	64.860	ENSACLG00000010073	trmt1	92	64.860	Astatotilapia_calliptera
ENSPEMG00000016247	Trmt1	87	65.870	ENSAMXG00000012026	trmt1	87	65.700	Astyanax_mexicanus
ENSPEMG00000016247	Trmt1	100	83.183	ENSBTAG00000019325	TRMT1	92	84.938	Bos_taurus
ENSPEMG00000016247	Trmt1	77	41.651	WBGene00006613	trm-1	93	40.691	Caenorhabditis_elegans
ENSPEMG00000016247	Trmt1	96	81.566	ENSCJAG00000004566	TRMT1	98	81.566	Callithrix_jacchus
ENSPEMG00000016247	Trmt1	100	84.084	ENSCAFG00000017070	TRMT1	97	86.613	Canis_familiaris
ENSPEMG00000016247	Trmt1	100	84.615	ENSCAFG00020005397	TRMT1	97	86.039	Canis_lupus_dingo
ENSPEMG00000016247	Trmt1	100	82.759	ENSCHIG00000013569	TRMT1	97	84.806	Capra_hircus
ENSPEMG00000016247	Trmt1	96	80.360	ENSTSYG00000003207	TRMT1	98	79.741	Carlito_syrichta
ENSPEMG00000016247	Trmt1	83	79.422	ENSCAPG00000003355	TRMT1	97	79.810	Cavia_aperea
ENSPEMG00000016247	Trmt1	97	81.395	ENSCPOG00000011754	TRMT1	97	81.395	Cavia_porcellus
ENSPEMG00000016247	Trmt1	98	79.878	ENSCCAG00000022263	TRMT1	98	83.882	Cebus_capucinus
ENSPEMG00000016247	Trmt1	100	84.985	ENSCATG00000039850	TRMT1	98	86.533	Cercocebus_atys
ENSPEMG00000016247	Trmt1	84	72.093	ENSCATG00000038220	-	95	72.093	Cercocebus_atys
ENSPEMG00000016247	Trmt1	95	84.882	ENSCLAG00000015295	TRMT1	94	84.882	Chinchilla_lanigera
ENSPEMG00000016247	Trmt1	80	86.792	ENSCSAG00000006500	TRMT1	100	86.792	Chlorocebus_sabaeus
ENSPEMG00000016247	Trmt1	94	65.884	ENSCPBG00000023866	TRMT1	94	66.041	Chrysemys_picta_bellii
ENSPEMG00000016247	Trmt1	83	46.429	ENSCING00000002884	-	98	47.122	Ciona_intestinalis
ENSPEMG00000016247	Trmt1	82	47.005	ENSCSAVG00000010927	-	99	46.753	Ciona_savignyi
ENSPEMG00000016247	Trmt1	98	68.702	ENSCANG00000040631	TRMT1	96	69.764	Colobus_angolensis_palliatus
ENSPEMG00000016247	Trmt1	94	66.240	ENSCANG00000031650	-	95	66.240	Colobus_angolensis_palliatus
ENSPEMG00000016247	Trmt1	100	92.767	ENSCGRG00001022594	Trmt1	98	93.237	Cricetulus_griseus_chok1gshd
ENSPEMG00000016247	Trmt1	100	92.767	ENSCGRG00000017732	Trmt1	98	93.237	Cricetulus_griseus_crigri
ENSPEMG00000016247	Trmt1	86	65.794	ENSCSEG00000001643	trmt1	84	67.315	Cynoglossus_semilaevis
ENSPEMG00000016247	Trmt1	86	67.601	ENSCVAG00000011886	trmt1	85	67.601	Cyprinodon_variegatus
ENSPEMG00000016247	Trmt1	86	65.517	ENSDARG00000010978	trmt1	85	65.000	Danio_rerio
ENSPEMG00000016247	Trmt1	84	58.511	ENSDNOG00000048240	-	93	58.909	Dasypus_novemcinctus
ENSPEMG00000016247	Trmt1	99	80.885	ENSDORG00000014298	Trmt1	97	82.353	Dipodomys_ordii
ENSPEMG00000016247	Trmt1	77	49.711	FBgn0032430	CG6388	87	49.711	Drosophila_melanogaster
ENSPEMG00000016247	Trmt1	58	78.966	ENSETEG00000015483	-	53	78.966	Echinops_telfairi
ENSPEMG00000016247	Trmt1	78	53.385	ENSEBUG00000003449	trmt1	75	54.141	Eptatretus_burgeri
ENSPEMG00000016247	Trmt1	93	83.548	ENSEASG00005004050	TRMT1	97	83.548	Equus_asinus_asinus
ENSPEMG00000016247	Trmt1	93	83.871	ENSECAG00000016149	TRMT1	97	83.871	Equus_caballus
ENSPEMG00000016247	Trmt1	60	70.277	ENSEEUG00000014102	-	100	70.277	Erinaceus_europaeus
ENSPEMG00000016247	Trmt1	92	60.601	ENSELUG00000021659	trmt1	94	60.220	Esox_lucius
ENSPEMG00000016247	Trmt1	99	83.886	ENSFCAG00000000483	TRMT1	97	85.155	Felis_catus
ENSPEMG00000016247	Trmt1	99	81.191	ENSFDAG00000007386	TRMT1	97	82.820	Fukomys_damarensis
ENSPEMG00000016247	Trmt1	88	64.346	ENSFHEG00000012865	trmt1	90	67.647	Fundulus_heteroclitus
ENSPEMG00000016247	Trmt1	86	60.000	ENSGMOG00000006564	trmt1	98	60.208	Gadus_morhua
ENSPEMG00000016247	Trmt1	91	65.246	ENSGAFG00000011862	trmt1	94	65.246	Gambusia_affinis
ENSPEMG00000016247	Trmt1	94	60.417	ENSGACG00000000227	trmt1	99	60.417	Gasterosteus_aculeatus
ENSPEMG00000016247	Trmt1	90	68.447	ENSGAGG00000016432	TRMT1	88	67.993	Gopherus_agassizii
ENSPEMG00000016247	Trmt1	96	86.885	ENSGGOG00000014007	TRMT1	98	86.180	Gorilla_gorilla
ENSPEMG00000016247	Trmt1	85	58.099	ENSHBUG00000008821	trmt1	93	58.099	Haplochromis_burtoni
ENSPEMG00000016247	Trmt1	98	82.975	ENSHGLG00000015972	TRMT1	98	83.437	Heterocephalus_glaber_female
ENSPEMG00000016247	Trmt1	98	78.491	ENSHGLG00100018112	TRMT1	98	78.930	Heterocephalus_glaber_male
ENSPEMG00000016247	Trmt1	92	60.806	ENSHCOG00000009447	trmt1	95	60.806	Hippocampus_comes
ENSPEMG00000016247	Trmt1	86	65.068	ENSIPUG00000002899	trmt1	85	65.068	Ictalurus_punctatus
ENSPEMG00000016247	Trmt1	100	84.844	ENSSTOG00000012531	TRMT1	98	86.013	Ictidomys_tridecemlineatus
ENSPEMG00000016247	Trmt1	94	84.167	ENSJJAG00000017154	Trmt1	98	82.372	Jaculus_jaculus
ENSPEMG00000016247	Trmt1	86	67.657	ENSKMAG00000011809	trmt1	98	64.636	Kryptolebias_marmoratus
ENSPEMG00000016247	Trmt1	86	66.725	ENSLBEG00000012703	trmt1	84	66.608	Labrus_bergylta
ENSPEMG00000016247	Trmt1	86	58.362	ENSLACG00000014585	TRMT1	93	58.188	Latimeria_chalumnae
ENSPEMG00000016247	Trmt1	86	61.301	ENSLOCG00000006479	trmt1	97	61.724	Lepisosteus_oculatus
ENSPEMG00000016247	Trmt1	97	83.975	ENSLAFG00000014072	TRMT1	99	83.951	Loxodonta_africana
ENSPEMG00000016247	Trmt1	100	85.135	ENSMFAG00000033143	TRMT1	98	86.687	Macaca_fascicularis
ENSPEMG00000016247	Trmt1	99	81.111	ENSMMUG00000001167	TRMT1	97	82.623	Macaca_mulatta
ENSPEMG00000016247	Trmt1	100	85.285	ENSMNEG00000037867	TRMT1	98	86.842	Macaca_nemestrina
ENSPEMG00000016247	Trmt1	99	85.079	ENSMLEG00000016142	TRMT1	97	86.721	Mandrillus_leucophaeus
ENSPEMG00000016247	Trmt1	90	65.667	ENSMAMG00000004357	trmt1	89	65.667	Mastacembelus_armatus
ENSPEMG00000016247	Trmt1	86	65.385	ENSMZEG00005014510	trmt1	85	65.385	Maylandia_zebra
ENSPEMG00000016247	Trmt1	97	92.868	ENSMAUG00000011134	Trmt1	97	92.868	Mesocricetus_auratus
ENSPEMG00000016247	Trmt1	100	84.535	ENSMICG00000000793	TRMT1	98	85.913	Microcebus_murinus
ENSPEMG00000016247	Trmt1	98	93.077	ENSMOCG00000015895	Trmt1	98	93.077	Microtus_ochrogaster
ENSPEMG00000016247	Trmt1	86	65.499	ENSMMOG00000011097	trmt1	92	65.499	Mola_mola
ENSPEMG00000016247	Trmt1	93	74.799	ENSMODG00000011619	TRMT1	99	74.799	Monodelphis_domestica
ENSPEMG00000016247	Trmt1	100	90.409	MGP_CAROLIEiJ_G0031304	Trmt1	100	89.695	Mus_caroli
ENSPEMG00000016247	Trmt1	100	90.252	ENSMUSG00000001909	Trmt1	100	88.931	Mus_musculus
ENSPEMG00000016247	Trmt1	100	89.937	MGP_SPRETEiJ_G0032422	Trmt1	100	88.931	Mus_spretus
ENSPEMG00000016247	Trmt1	100	84.234	ENSMPUG00000004210	TRMT1	92	85.581	Mustela_putorius_furo
ENSPEMG00000016247	Trmt1	100	83.784	ENSMLUG00000012809	TRMT1	96	85.116	Myotis_lucifugus
ENSPEMG00000016247	Trmt1	100	83.982	ENSNGAG00000022486	Trmt1	97	85.736	Nannospalax_galili
ENSPEMG00000016247	Trmt1	74	69.552	ENSNBRG00000024376	trmt1	85	69.552	Neolamprologus_brichardi
ENSPEMG00000016247	Trmt1	81	86.592	ENSNLEG00000013019	-	97	84.783	Nomascus_leucogenys
ENSPEMG00000016247	Trmt1	90	74.874	ENSMEUG00000013756	TRMT1	100	74.707	Notamacropus_eugenii
ENSPEMG00000016247	Trmt1	78	86.019	ENSOPRG00000009471	-	79	86.019	Ochotona_princeps
ENSPEMG00000016247	Trmt1	98	83.028	ENSODEG00000010323	TRMT1	98	83.721	Octodon_degus
ENSPEMG00000016247	Trmt1	91	65.289	ENSONIG00000000400	trmt1	96	65.289	Oreochromis_niloticus
ENSPEMG00000016247	Trmt1	78	85.687	ENSOCUG00000021934	TRMT1	99	85.687	Oryctolagus_cuniculus
ENSPEMG00000016247	Trmt1	86	62.369	ENSORLG00000020074	trmt1	90	62.027	Oryzias_latipes
ENSPEMG00000016247	Trmt1	86	65.559	ENSORLG00020007561	trmt1	89	65.385	Oryzias_latipes_hni
ENSPEMG00000016247	Trmt1	86	65.909	ENSORLG00015006547	trmt1	86	65.909	Oryzias_latipes_hsok
ENSPEMG00000016247	Trmt1	86	65.969	ENSOMEG00000019343	trmt1	86	65.969	Oryzias_melastigma
ENSPEMG00000016247	Trmt1	95	82.753	ENSOGAG00000025576	TRMT1	99	82.595	Otolemur_garnettii
ENSPEMG00000016247	Trmt1	100	71.451	ENSOARG00000009397	TRMT1	91	71.994	Ovis_aries
ENSPEMG00000016247	Trmt1	98	76.997	ENSPPRG00000012117	TRMT1	98	77.578	Panthera_pardus
ENSPEMG00000016247	Trmt1	80	86.061	ENSPTIG00000008833	TRMT1	94	86.280	Panthera_tigris_altaica
ENSPEMG00000016247	Trmt1	96	86.557	ENSPTRG00000010557	TRMT1	98	85.870	Pan_troglodytes
ENSPEMG00000016247	Trmt1	97	65.177	ENSPTRG00000050421	-	96	65.978	Pan_troglodytes
ENSPEMG00000016247	Trmt1	85	71.908	ENSPANG00000034058	-	93	71.908	Papio_anubis
ENSPEMG00000016247	Trmt1	99	85.578	ENSPANG00000009247	TRMT1	97	87.234	Papio_anubis
ENSPEMG00000016247	Trmt1	86	67.190	ENSPKIG00000005309	trmt1	84	66.841	Paramormyrops_kingsleyae
ENSPEMG00000016247	Trmt1	88	59.284	ENSPSIG00000008762	TRMT1	83	59.284	Pelodiscus_sinensis
ENSPEMG00000016247	Trmt1	86	64.921	ENSPMGG00000019764	trmt1	90	65.043	Periophthalmus_magnuspinnatus
ENSPEMG00000016247	Trmt1	87	60.000	ENSPMAG00000004329	trmt1	91	60.000	Petromyzon_marinus
ENSPEMG00000016247	Trmt1	97	71.560	ENSPCIG00000019273	TRMT1	99	71.560	Phascolarctos_cinereus
ENSPEMG00000016247	Trmt1	91	66.721	ENSPFOG00000008527	trmt1	93	66.393	Poecilia_formosa
ENSPEMG00000016247	Trmt1	91	66.232	ENSPLAG00000018788	trmt1	93	67.928	Poecilia_latipinna
ENSPEMG00000016247	Trmt1	91	66.558	ENSPMEG00000013120	trmt1	93	66.230	Poecilia_mexicana
ENSPEMG00000016247	Trmt1	91	65.353	ENSPREG00000000211	trmt1	90	65.353	Poecilia_reticulata
ENSPEMG00000016247	Trmt1	96	86.385	ENSPPYG00000009622	TRMT1	97	86.385	Pongo_abelii
ENSPEMG00000016247	Trmt1	99	75.946	ENSPCAG00000003698	TRMT1	99	77.174	Procavia_capensis
ENSPEMG00000016247	Trmt1	99	84.579	ENSPCOG00000008653	TRMT1	97	86.371	Propithecus_coquereli
ENSPEMG00000016247	Trmt1	99	83.308	ENSPVAG00000015076	TRMT1	97	84.483	Pteropus_vampyrus
ENSPEMG00000016247	Trmt1	86	63.636	ENSPNYG00000013960	trmt1	92	63.636	Pundamilia_nyererei
ENSPEMG00000016247	Trmt1	81	67.775	ENSPNAG00000024859	trmt1	90	67.775	Pygocentrus_nattereri
ENSPEMG00000016247	Trmt1	96	90.781	ENSRNOG00000002914	Trmt1	98	91.360	Rattus_norvegicus
ENSPEMG00000016247	Trmt1	100	84.234	ENSRBIG00000038324	TRMT1	98	85.759	Rhinopithecus_bieti
ENSPEMG00000016247	Trmt1	94	67.464	ENSRBIG00000037505	-	96	67.464	Rhinopithecus_bieti
ENSPEMG00000016247	Trmt1	94	66.667	ENSRROG00000031847	-	95	66.667	Rhinopithecus_roxellana
ENSPEMG00000016247	Trmt1	100	84.384	ENSRROG00000028599	TRMT1	98	85.913	Rhinopithecus_roxellana
ENSPEMG00000016247	Trmt1	76	38.920	YDR120C	-	92	38.547	Saccharomyces_cerevisiae
ENSPEMG00000016247	Trmt1	98	81.180	ENSSBOG00000028861	TRMT1	98	84.375	Saimiri_boliviensis_boliviensis
ENSPEMG00000016247	Trmt1	88	76.621	ENSSHAG00000014381	TRMT1	99	74.318	Sarcophilus_harrisii
ENSPEMG00000016247	Trmt1	86	67.190	ENSSFOG00015004139	trmt1	84	67.190	Scleropages_formosus
ENSPEMG00000016247	Trmt1	86	66.202	ENSSMAG00000021136	trmt1	85	65.854	Scophthalmus_maximus
ENSPEMG00000016247	Trmt1	86	66.667	ENSSDUG00000012740	trmt1	84	66.783	Seriola_dumerili
ENSPEMG00000016247	Trmt1	86	66.434	ENSSLDG00000005971	trmt1	84	66.434	Seriola_lalandi_dorsalis
ENSPEMG00000016247	Trmt1	85	81.514	ENSSARG00000005138	TRMT1	100	80.986	Sorex_araneus
ENSPEMG00000016247	Trmt1	90	53.808	ENSSPUG00000001084	TRMT1	93	53.477	Sphenodon_punctatus
ENSPEMG00000016247	Trmt1	89	63.228	ENSSPAG00000007153	trmt1	98	63.211	Stegastes_partitus
ENSPEMG00000016247	Trmt1	95	85.804	ENSSSCG00000013744	TRMT1	97	86.935	Sus_scrofa
ENSPEMG00000016247	Trmt1	89	61.037	ENSTRUG00000010700	trmt1	89	61.037	Takifugu_rubripes
ENSPEMG00000016247	Trmt1	86	65.271	ENSTNIG00000018808	trmt1	98	65.096	Tetraodon_nigroviridis
ENSPEMG00000016247	Trmt1	98	82.000	ENSTTRG00000006379	TRMT1	97	83.125	Tursiops_truncatus
ENSPEMG00000016247	Trmt1	98	84.135	ENSUAMG00000022911	TRMT1	97	85.572	Ursus_americanus
ENSPEMG00000016247	Trmt1	96	83.931	ENSUMAG00000006027	TRMT1	97	85.323	Ursus_maritimus
ENSPEMG00000016247	Trmt1	100	83.934	ENSVVUG00000024177	TRMT1	97	85.271	Vulpes_vulpes
ENSPEMG00000016247	Trmt1	71	69.831	ENSXETG00000033863	TRMT1	94	69.831	Xenopus_tropicalis
ENSPEMG00000016247	Trmt1	91	65.410	ENSXCOG00000015733	trmt1	93	65.410	Xiphophorus_couchianus
ENSPEMG00000016247	Trmt1	86	67.888	ENSXMAG00000013823	trmt1	97	67.888	Xiphophorus_maculatus