EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000016318 (Gene tree)
Gene ID: 102905691
Gene Symbol: Tnrc6a
Alias: -
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 86031 bases
Position: chrKI615459.1:2645018-2731048
Accession: 102905691
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000017391	Ago_hook	PF10427.9	2.1e-18	1	1
ENSPEMP00000017394	Ago_hook	PF10427.9	2.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000021713	-	5694	-	ENSPEMP00000017391	1897 (aa)	-	-
ENSPEMT00000021716	-	7337	XM_006980356	ENSPEMP00000017394	1896 (aa)	XP_006980418	-

Gene Model

Click here to download ENSPEMG00000016318's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000016318's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000016318	Tnrc6a	98	36.823	ENSPEMG00000011403	Tnrc6b	98	37.914
ENSPEMG00000016318	Tnrc6a	97	39.244	ENSPEMG00000009785	Tnrc6c	99	39.862

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000016318	Tnrc6a	100	94.505	ENSG00000090905	TNRC6A	100	95.000	Homo_sapiens
ENSPEMG00000016318	Tnrc6a	98	91.218	ENSAMEG00000009333	TNRC6A	99	91.423	Ailuropoda_melanoleuca
ENSPEMG00000016318	Tnrc6a	97	78.594	ENSAPLG00000009978	TNRC6A	100	78.699	Anas_platyrhynchos
ENSPEMG00000016318	Tnrc6a	100	53.693	ENSACAG00000011857	TNRC6A	100	55.534	Anolis_carolinensis
ENSPEMG00000016318	Tnrc6a	100	94.648	ENSANAG00000025252	TNRC6A	100	94.497	Aotus_nancymaae
ENSPEMG00000016318	Tnrc6a	91	57.342	ENSAMXG00000019919	tnrc6a	99	57.443	Astyanax_mexicanus
ENSPEMG00000016318	Tnrc6a	100	93.165	ENSBTAG00000017999	TNRC6A	100	92.647	Bos_taurus
ENSPEMG00000016318	Tnrc6a	100	91.959	ENSCJAG00000020677	TNRC6A	100	92.990	Callithrix_jacchus
ENSPEMG00000016318	Tnrc6a	98	93.394	ENSCAFG00000017531	TNRC6A	99	93.716	Canis_familiaris
ENSPEMG00000016318	Tnrc6a	98	91.439	ENSCAFG00020021160	TNRC6A	99	92.482	Canis_lupus_dingo
ENSPEMG00000016318	Tnrc6a	100	93.060	ENSCHIG00000019448	TNRC6A	100	93.186	Capra_hircus
ENSPEMG00000016318	Tnrc6a	100	94.179	ENSTSYG00000012711	TNRC6A	100	93.976	Carlito_syrichta
ENSPEMG00000016318	Tnrc6a	100	94.365	ENSCPOG00000036684	TNRC6A	100	94.523	Cavia_porcellus
ENSPEMG00000016318	Tnrc6a	100	94.706	ENSCCAG00000033664	TNRC6A	100	94.503	Cebus_capucinus
ENSPEMG00000016318	Tnrc6a	99	94.272	ENSCATG00000019284	TNRC6A	99	94.482	Cercocebus_atys
ENSPEMG00000016318	Tnrc6a	100	89.565	ENSCLAG00000010217	TNRC6A	100	89.628	Chinchilla_lanigera
ENSPEMG00000016318	Tnrc6a	100	92.186	ENSCSAG00000006561	TNRC6A	100	91.990	Chlorocebus_sabaeus
ENSPEMG00000016318	Tnrc6a	95	86.317	ENSCHOG00000009374	TNRC6A	94	86.521	Choloepus_hoffmanni
ENSPEMG00000016318	Tnrc6a	91	81.040	ENSCPBG00000001881	TNRC6A	99	81.098	Chrysemys_picta_bellii
ENSPEMG00000016318	Tnrc6a	100	94.756	ENSCANG00000041549	TNRC6A	100	94.552	Colobus_angolensis_palliatus
ENSPEMG00000016318	Tnrc6a	100	97.791	ENSCGRG00001015021	Tnrc6a	100	97.739	Cricetulus_griseus_chok1gshd
ENSPEMG00000016318	Tnrc6a	100	96.795	ENSCGRG00000013351	Tnrc6a	99	97.161	Cricetulus_griseus_crigri
ENSPEMG00000016318	Tnrc6a	91	57.071	ENSDARG00000079688	tnrc6a	99	57.375	Danio_rerio
ENSPEMG00000016318	Tnrc6a	98	89.816	ENSDNOG00000013989	TNRC6A	99	89.869	Dasypus_novemcinctus
ENSPEMG00000016318	Tnrc6a	98	83.561	ENSETEG00000014658	TNRC6A	99	83.613	Echinops_telfairi
ENSPEMG00000016318	Tnrc6a	100	94.003	ENSEASG00005017693	TNRC6A	100	93.957	Equus_asinus_asinus
ENSPEMG00000016318	Tnrc6a	98	93.854	ENSECAG00000025056	TNRC6A	99	94.232	Equus_caballus
ENSPEMG00000016318	Tnrc6a	98	85.483	ENSEEUG00000004530	TNRC6A	99	85.535	Erinaceus_europaeus
ENSPEMG00000016318	Tnrc6a	100	93.382	ENSFCAG00000025236	TNRC6A	100	93.127	Felis_catus
ENSPEMG00000016318	Tnrc6a	100	76.039	ENSFALG00000003757	TNRC6A	99	77.192	Ficedula_albicollis
ENSPEMG00000016318	Tnrc6a	91	81.016	ENSGALG00000006068	TNRC6A	99	81.650	Gallus_gallus
ENSPEMG00000016318	Tnrc6a	91	80.368	ENSGAGG00000023209	TNRC6A	99	80.714	Gopherus_agassizii
ENSPEMG00000016318	Tnrc6a	99	94.409	ENSGGOG00000005137	TNRC6A	99	94.778	Gorilla_gorilla
ENSPEMG00000016318	Tnrc6a	99	92.677	ENSHGLG00000012474	-	100	92.729	Heterocephalus_glaber_female
ENSPEMG00000016318	Tnrc6a	95	73.485	ENSHGLG00000007368	-	93	73.475	Heterocephalus_glaber_female
ENSPEMG00000016318	Tnrc6a	99	92.291	ENSHGLG00100012496	-	100	92.344	Heterocephalus_glaber_male
ENSPEMG00000016318	Tnrc6a	100	91.442	ENSSTOG00000023394	TNRC6A	99	91.442	Ictidomys_tridecemlineatus
ENSPEMG00000016318	Tnrc6a	97	67.342	ENSLACG00000006277	TNRC6A	100	67.809	Latimeria_chalumnae
ENSPEMG00000016318	Tnrc6a	100	83.002	ENSLOCG00000005517	tnrc6a	93	83.002	Lepisosteus_oculatus
ENSPEMG00000016318	Tnrc6a	98	93.423	ENSLAFG00000004209	TNRC6A	99	93.420	Loxodonta_africana
ENSPEMG00000016318	Tnrc6a	97	91.223	ENSMFAG00000003824	TNRC6A	99	91.432	Macaca_fascicularis
ENSPEMG00000016318	Tnrc6a	100	94.651	ENSMMUG00000020428	TNRC6A	100	94.500	Macaca_mulatta
ENSPEMG00000016318	Tnrc6a	100	94.627	ENSMNEG00000034854	TNRC6A	100	94.216	Macaca_nemestrina
ENSPEMG00000016318	Tnrc6a	97	90.881	ENSMLEG00000042737	TNRC6A	97	90.933	Mandrillus_leucophaeus
ENSPEMG00000016318	Tnrc6a	100	76.203	ENSMGAG00000006455	TNRC6A	99	76.911	Meleagris_gallopavo
ENSPEMG00000016318	Tnrc6a	100	97.840	ENSMAUG00000012750	Tnrc6a	100	97.526	Mesocricetus_auratus
ENSPEMG00000016318	Tnrc6a	100	94.924	ENSMICG00000030685	TNRC6A	100	94.668	Microcebus_murinus
ENSPEMG00000016318	Tnrc6a	100	97.944	ENSMOCG00000000152	Tnrc6a	100	97.525	Microtus_ochrogaster
ENSPEMG00000016318	Tnrc6a	100	77.783	ENSMODG00000016348	TNRC6A	99	78.932	Monodelphis_domestica
ENSPEMG00000016318	Tnrc6a	99	96.387	MGP_CAROLIEiJ_G0030425	Tnrc6a	99	96.387	Mus_caroli
ENSPEMG00000016318	Tnrc6a	100	96.943	ENSMUSG00000052707	Tnrc6a	100	96.524	Mus_musculus
ENSPEMG00000016318	Tnrc6a	99	97.026	MGP_PahariEiJ_G0013635	Tnrc6a	99	97.026	Mus_pahari
ENSPEMG00000016318	Tnrc6a	100	94.090	MGP_SPRETEiJ_G0031539	Tnrc6a	100	93.737	Mus_spretus
ENSPEMG00000016318	Tnrc6a	97	82.883	ENSMPUG00000012324	TNRC6A	100	82.613	Mustela_putorius_furo
ENSPEMG00000016318	Tnrc6a	97	89.293	ENSMLUG00000002701	TNRC6A	100	89.451	Myotis_lucifugus
ENSPEMG00000016318	Tnrc6a	100	95.266	ENSNGAG00000020702	Tnrc6a	100	95.318	Nannospalax_galili
ENSPEMG00000016318	Tnrc6a	97	92.880	ENSNLEG00000011851	TNRC6A	98	92.988	Nomascus_leucogenys
ENSPEMG00000016318	Tnrc6a	77	83.610	ENSMEUG00000015959	-	77	83.610	Notamacropus_eugenii
ENSPEMG00000016318	Tnrc6a	96	99.627	ENSOPRG00000005819	TNRC6A	96	99.627	Ochotona_princeps
ENSPEMG00000016318	Tnrc6a	99	89.214	ENSODEG00000012802	TNRC6A	99	88.676	Octodon_degus
ENSPEMG00000016318	Tnrc6a	87	79.258	ENSOANG00000007672	TNRC6A	99	79.405	Ornithorhynchus_anatinus
ENSPEMG00000016318	Tnrc6a	97	89.088	ENSOCUG00000004325	TNRC6A	100	88.930	Oryctolagus_cuniculus
ENSPEMG00000016318	Tnrc6a	99	92.153	ENSOGAG00000006666	TNRC6A	100	92.308	Otolemur_garnettii
ENSPEMG00000016318	Tnrc6a	99	89.810	ENSOARG00000017950	TNRC6A	98	93.535	Ovis_aries
ENSPEMG00000016318	Tnrc6a	100	94.259	ENSPPAG00000028379	TNRC6A	100	94.520	Pan_paniscus
ENSPEMG00000016318	Tnrc6a	100	93.382	ENSPPRG00000005861	TNRC6A	100	93.127	Panthera_pardus
ENSPEMG00000016318	Tnrc6a	100	92.155	ENSPTIG00000006346	TNRC6A	99	92.312	Panthera_tigris_altaica
ENSPEMG00000016318	Tnrc6a	99	90.179	ENSPTRG00000007898	TNRC6A	99	91.771	Pan_troglodytes
ENSPEMG00000016318	Tnrc6a	100	92.163	ENSPANG00000018523	TNRC6A	100	91.962	Papio_anubis
ENSPEMG00000016318	Tnrc6a	87	75.862	ENSPKIG00000012859	tnrc6a	99	75.862	Paramormyrops_kingsleyae
ENSPEMG00000016318	Tnrc6a	77	77.048	ENSPSIG00000003965	TNRC6A	99	77.116	Pelodiscus_sinensis
ENSPEMG00000016318	Tnrc6a	97	81.896	ENSPCIG00000012106	TNRC6A	100	82.129	Phascolarctos_cinereus
ENSPEMG00000016318	Tnrc6a	100	91.539	ENSPPYG00000007202	TNRC6A	100	91.692	Pongo_abelii
ENSPEMG00000016318	Tnrc6a	95	100.000	ENSPCAG00000008260	TNRC6A	94	100.000	Procavia_capensis
ENSPEMG00000016318	Tnrc6a	100	92.565	ENSPCOG00000010134	TNRC6A	100	92.312	Propithecus_coquereli
ENSPEMG00000016318	Tnrc6a	89	69.222	ENSPVAG00000012066	TNRC6A	99	69.856	Pteropus_vampyrus
ENSPEMG00000016318	Tnrc6a	100	96.132	ENSRNOG00000024737	Tnrc6a	100	95.718	Rattus_norvegicus
ENSPEMG00000016318	Tnrc6a	98	94.465	ENSRBIG00000014222	TNRC6A	99	94.734	Rhinopithecus_bieti
ENSPEMG00000016318	Tnrc6a	100	92.469	ENSRROG00000032360	TNRC6A	100	92.272	Rhinopithecus_roxellana
ENSPEMG00000016318	Tnrc6a	98	91.697	ENSSBOG00000036197	TNRC6A	99	92.988	Saimiri_boliviensis_boliviensis
ENSPEMG00000016318	Tnrc6a	91	82.668	ENSSHAG00000008811	TNRC6A	99	83.124	Sarcophilus_harrisii
ENSPEMG00000016318	Tnrc6a	91	58.758	ENSSFOG00015008920	tnrc6a	99	58.621	Scleropages_formosus
ENSPEMG00000016318	Tnrc6a	71	75.736	ENSSARG00000002479	TNRC6A	89	76.325	Sorex_araneus
ENSPEMG00000016318	Tnrc6a	90	77.579	ENSSPUG00000010525	TNRC6A	100	77.970	Sphenodon_punctatus
ENSPEMG00000016318	Tnrc6a	100	93.260	ENSSSCG00000038870	TNRC6A	99	95.570	Sus_scrofa
ENSPEMG00000016318	Tnrc6a	100	78.931	ENSTGUG00000006142	TNRC6A	99	79.769	Taeniopygia_guttata
ENSPEMG00000016318	Tnrc6a	98	89.603	ENSTBEG00000014965	TNRC6A	99	89.911	Tupaia_belangeri
ENSPEMG00000016318	Tnrc6a	93	91.154	ENSTTRG00000002008	TNRC6A	93	91.154	Tursiops_truncatus
ENSPEMG00000016318	Tnrc6a	79	93.244	ENSUAMG00000006656	-	93	93.445	Ursus_americanus
ENSPEMG00000016318	Tnrc6a	99	90.578	ENSUMAG00000008274	TNRC6A	99	95.449	Ursus_maritimus
ENSPEMG00000016318	Tnrc6a	55	84.848	ENSVPAG00000010764	-	57	84.343	Vicugna_pacos
ENSPEMG00000016318	Tnrc6a	93	100.000	ENSVVUG00000005380	TNRC6A	99	93.819	Vulpes_vulpes
ENSPEMG00000016318	Tnrc6a	94	63.783	ENSXETG00000030437	TNRC6A	99	63.916	Xenopus_tropicalis