EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000016384 (Gene tree)
Gene ID: 102927198
Gene Symbol: Cmss1
Alias: -
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 314819 bases
Position: chrKI616251.1:935452-1250270
Accession: 102927198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000017486	CMS1	PF14617.6	1.2e-33	1	1
ENSPEMP00000017489	CMS1	PF14617.6	1.3e-33	1	1
ENSPEMP00000017486	DEAD	PF00270.29	3.4e-06	1	1
ENSPEMP00000017489	DEAD	PF00270.29	3.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000021808	-	843	XM_015989183	ENSPEMP00000017486	280 (aa)	XP_015844669	UPI00077DE2A6
ENSPEMT00000021811	-	864	-	ENSPEMP00000017489	287 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000016384's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000016384's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000016384	Cmss1	100	82.857	ENSG00000184220	CMSS1	98	88.750	Homo_sapiens
ENSPEMG00000016384	Cmss1	72	64.851	ENSAPOG00000010604	cmss1	99	60.163	Acanthochromis_polyacanthus
ENSPEMG00000016384	Cmss1	92	84.556	ENSAMEG00000004092	CMSS1	100	84.556	Ailuropoda_melanoleuca
ENSPEMG00000016384	Cmss1	72	52.970	ENSACIG00000021854	cmss1	75	52.970	Amphilophus_citrinellus
ENSPEMG00000016384	Cmss1	100	52.218	ENSAOCG00000013361	cmss1	100	53.979	Amphiprion_ocellaris
ENSPEMG00000016384	Cmss1	100	52.577	ENSAPEG00000005829	cmss1	100	53.448	Amphiprion_percula
ENSPEMG00000016384	Cmss1	100	50.508	ENSATEG00000008209	cmss1	100	52.218	Anabas_testudineus
ENSPEMG00000016384	Cmss1	82	69.130	ENSAPLG00000010542	CMSS1	100	69.130	Anas_platyrhynchos
ENSPEMG00000016384	Cmss1	91	61.742	ENSACAG00000011065	CMSS1	97	62.121	Anolis_carolinensis
ENSPEMG00000016384	Cmss1	100	80.427	ENSANAG00000023565	CMSS1	100	80.427	Aotus_nancymaae
ENSPEMG00000016384	Cmss1	100	49.828	ENSACLG00000027294	cmss1	100	50.859	Astatotilapia_calliptera
ENSPEMG00000016384	Cmss1	100	45.819	ENSAMXG00000002046	cmss1	100	48.475	Astyanax_mexicanus
ENSPEMG00000016384	Cmss1	100	82.143	ENSBTAG00000013663	CMSS1	100	82.500	Bos_taurus
ENSPEMG00000016384	Cmss1	100	81.495	ENSCJAG00000000610	CMSS1	100	81.495	Callithrix_jacchus
ENSPEMG00000016384	Cmss1	92	83.721	ENSCAFG00000009230	CMSS1	94	83.012	Canis_familiaris
ENSPEMG00000016384	Cmss1	93	83.398	ENSCAFG00020009464	-	95	83.398	Canis_lupus_dingo
ENSPEMG00000016384	Cmss1	83	77.682	ENSCAFG00020024156	-	77	74.390	Canis_lupus_dingo
ENSPEMG00000016384	Cmss1	91	82.422	ENSCHIG00000013003	CMSS1	93	82.422	Capra_hircus
ENSPEMG00000016384	Cmss1	96	78.598	ENSTSYG00000009266	CMSS1	99	81.008	Carlito_syrichta
ENSPEMG00000016384	Cmss1	80	68.122	ENSCAPG00000013584	CMSS1	88	73.846	Cavia_aperea
ENSPEMG00000016384	Cmss1	100	79.643	ENSCPOG00000014680	CMSS1	100	79.643	Cavia_porcellus
ENSPEMG00000016384	Cmss1	100	82.206	ENSCCAG00000034685	CMSS1	100	82.206	Cebus_capucinus
ENSPEMG00000016384	Cmss1	100	83.214	ENSCATG00000031980	CMSS1	100	83.214	Cercocebus_atys
ENSPEMG00000016384	Cmss1	82	84.716	ENSCLAG00000011241	CMSS1	98	84.716	Chinchilla_lanigera
ENSPEMG00000016384	Cmss1	87	84.426	ENSCSAG00000006024	CMSS1	99	84.426	Chlorocebus_sabaeus
ENSPEMG00000016384	Cmss1	100	62.857	ENSCHOG00000012098	CMSS1	100	62.857	Choloepus_hoffmanni
ENSPEMG00000016384	Cmss1	70	42.714	ENSCING00000014848	-	99	43.316	Ciona_intestinalis
ENSPEMG00000016384	Cmss1	100	82.857	ENSCANG00000031337	CMSS1	100	82.857	Colobus_angolensis_palliatus
ENSPEMG00000016384	Cmss1	100	90.000	ENSCGRG00001014305	Cmss1	100	90.000	Cricetulus_griseus_chok1gshd
ENSPEMG00000016384	Cmss1	92	91.051	ENSCGRG00000006722	Cmss1	100	91.051	Cricetulus_griseus_crigri
ENSPEMG00000016384	Cmss1	100	49.338	ENSCSEG00000004958	cmss1	100	50.492	Cynoglossus_semilaevis
ENSPEMG00000016384	Cmss1	100	51.712	ENSCVAG00000005039	cmss1	100	53.082	Cyprinodon_variegatus
ENSPEMG00000016384	Cmss1	100	47.945	ENSDARG00000112579	cmss1	100	48.805	Danio_rerio
ENSPEMG00000016384	Cmss1	93	79.389	ENSDNOG00000040418	CMSS1	92	79.923	Dasypus_novemcinctus
ENSPEMG00000016384	Cmss1	100	82.500	ENSDORG00000010461	Cmss1	100	82.500	Dipodomys_ordii
ENSPEMG00000016384	Cmss1	96	74.444	ENSEASG00005010966	CMSS1	99	84.475	Equus_asinus_asinus
ENSPEMG00000016384	Cmss1	95	78.277	ENSECAG00000015662	CMSS1	99	83.186	Equus_caballus
ENSPEMG00000016384	Cmss1	100	55.714	ENSEEUG00000007624	-	100	55.714	Erinaceus_europaeus
ENSPEMG00000016384	Cmss1	100	52.318	ENSELUG00000019459	cmss1	100	53.000	Esox_lucius
ENSPEMG00000016384	Cmss1	100	85.000	ENSFCAG00000044577	CMSS1	100	85.000	Felis_catus
ENSPEMG00000016384	Cmss1	85	64.979	ENSFALG00000005816	CMSS1	100	64.979	Ficedula_albicollis
ENSPEMG00000016384	Cmss1	81	84.211	ENSFDAG00000012577	CMSS1	100	84.211	Fukomys_damarensis
ENSPEMG00000016384	Cmss1	81	60.870	ENSFHEG00000012008	cmss1	95	60.870	Fundulus_heteroclitus
ENSPEMG00000016384	Cmss1	99	48.986	ENSGMOG00000016729	cmss1	100	52.265	Gadus_morhua
ENSPEMG00000016384	Cmss1	90	64.032	ENSGALG00000015267	CMSS1	97	64.032	Gallus_gallus
ENSPEMG00000016384	Cmss1	74	62.136	ENSGAFG00000021217	cmss1	77	61.881	Gambusia_affinis
ENSPEMG00000016384	Cmss1	99	47.703	ENSGACG00000002798	cmss1	100	48.421	Gasterosteus_aculeatus
ENSPEMG00000016384	Cmss1	92	66.160	ENSGAGG00000019861	CMSS1	99	66.160	Gopherus_agassizii
ENSPEMG00000016384	Cmss1	92	83.333	ENSGGOG00000014125	CMSS1	99	83.333	Gorilla_gorilla
ENSPEMG00000016384	Cmss1	100	50.345	ENSHBUG00000008431	cmss1	100	50.345	Haplochromis_burtoni
ENSPEMG00000016384	Cmss1	89	80.400	ENSHGLG00000019481	CMSS1	99	80.400	Heterocephalus_glaber_female
ENSPEMG00000016384	Cmss1	91	80.078	ENSHGLG00100010314	CMSS1	99	80.078	Heterocephalus_glaber_male
ENSPEMG00000016384	Cmss1	100	50.676	ENSHCOG00000003222	cmss1	100	51.515	Hippocampus_comes
ENSPEMG00000016384	Cmss1	100	48.276	ENSIPUG00000011591	cmss1	100	49.655	Ictalurus_punctatus
ENSPEMG00000016384	Cmss1	100	82.500	ENSSTOG00000019366	CMSS1	100	82.500	Ictidomys_tridecemlineatus
ENSPEMG00000016384	Cmss1	100	81.429	ENSJJAG00000014894	Cmss1	100	81.429	Jaculus_jaculus
ENSPEMG00000016384	Cmss1	72	52.970	ENSKMAG00000002390	cmss1	99	48.163	Kryptolebias_marmoratus
ENSPEMG00000016384	Cmss1	72	58.128	ENSLBEG00000006298	cmss1	98	52.016	Labrus_bergylta
ENSPEMG00000016384	Cmss1	81	63.913	ENSLACG00000009293	CMSS1	100	63.913	Latimeria_chalumnae
ENSPEMG00000016384	Cmss1	100	50.877	ENSLOCG00000009391	cmss1	100	51.579	Lepisosteus_oculatus
ENSPEMG00000016384	Cmss1	81	84.649	ENSLAFG00000017509	CMSS1	100	84.649	Loxodonta_africana
ENSPEMG00000016384	Cmss1	100	83.214	ENSMFAG00000045006	CMSS1	100	83.214	Macaca_fascicularis
ENSPEMG00000016384	Cmss1	100	82.857	ENSMMUG00000002939	CMSS1	98	85.000	Macaca_mulatta
ENSPEMG00000016384	Cmss1	100	82.857	ENSMNEG00000031315	CMSS1	100	82.857	Macaca_nemestrina
ENSPEMG00000016384	Cmss1	100	82.857	ENSMLEG00000033660	CMSS1	100	82.857	Mandrillus_leucophaeus
ENSPEMG00000016384	Cmss1	100	52.013	ENSMAMG00000017176	cmss1	100	53.448	Mastacembelus_armatus
ENSPEMG00000016384	Cmss1	100	49.828	ENSMZEG00005021886	cmss1	100	50.859	Maylandia_zebra
ENSPEMG00000016384	Cmss1	81	67.982	ENSMGAG00000014360	CMSS1	100	67.982	Meleagris_gallopavo
ENSPEMG00000016384	Cmss1	100	70.357	ENSMAUG00000020609	Cmss1	100	70.357	Mesocricetus_auratus
ENSPEMG00000016384	Cmss1	100	83.929	ENSMICG00000048977	CMSS1	100	83.929	Microcebus_murinus
ENSPEMG00000016384	Cmss1	100	87.500	ENSMOCG00000021937	Cmss1	100	87.500	Microtus_ochrogaster
ENSPEMG00000016384	Cmss1	72	60.891	ENSMMOG00000019794	cmss1	94	57.328	Mola_mola
ENSPEMG00000016384	Cmss1	92	71.264	ENSMODG00000002275	CMSS1	97	71.264	Monodelphis_domestica
ENSPEMG00000016384	Cmss1	100	51.155	ENSMALG00000004250	cmss1	100	53.061	Monopterus_albus
ENSPEMG00000016384	Cmss1	100	89.324	MGP_CAROLIEiJ_G0020824	Cmss1	100	89.324	Mus_caroli
ENSPEMG00000016384	Cmss1	100	90.036	ENSMUSG00000022748	Cmss1	100	90.036	Mus_musculus
ENSPEMG00000016384	Cmss1	100	88.256	MGP_PahariEiJ_G0016524	Cmss1	100	88.256	Mus_pahari
ENSPEMG00000016384	Cmss1	100	89.324	MGP_SPRETEiJ_G0021724	Cmss1	100	89.324	Mus_spretus
ENSPEMG00000016384	Cmss1	92	85.603	ENSMPUG00000011324	CMSS1	99	84.942	Mustela_putorius_furo
ENSPEMG00000016384	Cmss1	92	84.615	ENSMLUG00000001131	CMSS1	100	83.650	Myotis_lucifugus
ENSPEMG00000016384	Cmss1	100	86.071	ENSNGAG00000020316	Cmss1	100	86.071	Nannospalax_galili
ENSPEMG00000016384	Cmss1	100	50.515	ENSNBRG00000003095	cmss1	100	50.515	Neolamprologus_brichardi
ENSPEMG00000016384	Cmss1	100	84.286	ENSNLEG00000034172	CMSS1	100	84.286	Nomascus_leucogenys
ENSPEMG00000016384	Cmss1	81	64.035	ENSMEUG00000014505	CMSS1	100	64.035	Notamacropus_eugenii
ENSPEMG00000016384	Cmss1	100	83.214	ENSOPRG00000002986	CMSS1	100	83.214	Ochotona_princeps
ENSPEMG00000016384	Cmss1	100	77.305	ENSODEG00000003558	-	100	77.305	Octodon_degus
ENSPEMG00000016384	Cmss1	100	70.357	ENSODEG00000001853	-	100	70.357	Octodon_degus
ENSPEMG00000016384	Cmss1	100	81.429	ENSODEG00000005226	-	100	81.429	Octodon_degus
ENSPEMG00000016384	Cmss1	100	65.714	ENSODEG00000009446	-	100	65.714	Octodon_degus
ENSPEMG00000016384	Cmss1	72	60.396	ENSONIG00000006678	cmss1	100	49.819	Oreochromis_niloticus
ENSPEMG00000016384	Cmss1	91	69.231	ENSOANG00000007529	CMSS1	100	73.820	Ornithorhynchus_anatinus
ENSPEMG00000016384	Cmss1	95	81.955	ENSOCUG00000025366	CMSS1	96	81.955	Oryctolagus_cuniculus
ENSPEMG00000016384	Cmss1	100	55.439	ENSORLG00000020340	cmss1	100	55.439	Oryzias_latipes
ENSPEMG00000016384	Cmss1	82	54.148	ENSORLG00020012235	cmss1	98	53.913	Oryzias_latipes_hni
ENSPEMG00000016384	Cmss1	72	57.921	ENSORLG00015015551	cmss1	75	57.921	Oryzias_latipes_hsok
ENSPEMG00000016384	Cmss1	100	55.363	ENSOMEG00000012555	cmss1	100	56.055	Oryzias_melastigma
ENSPEMG00000016384	Cmss1	81	84.649	ENSOGAG00000002045	CMSS1	100	84.649	Otolemur_garnettii
ENSPEMG00000016384	Cmss1	91	82.490	ENSOARG00000017899	CMSS1	90	80.989	Ovis_aries
ENSPEMG00000016384	Cmss1	92	83.333	ENSPPAG00000038515	CMSS1	95	83.333	Pan_paniscus
ENSPEMG00000016384	Cmss1	100	84.643	ENSPPRG00000016767	CMSS1	100	84.643	Panthera_pardus
ENSPEMG00000016384	Cmss1	100	84.286	ENSPTIG00000018274	CMSS1	100	84.286	Panthera_tigris_altaica
ENSPEMG00000016384	Cmss1	100	82.500	ENSPTRG00000015157	CMSS1	99	84.016	Pan_troglodytes
ENSPEMG00000016384	Cmss1	92	81.008	ENSPANG00000019980	CMSS1	99	81.008	Papio_anubis
ENSPEMG00000016384	Cmss1	95	53.791	ENSPKIG00000012609	cmss1	99	53.358	Paramormyrops_kingsleyae
ENSPEMG00000016384	Cmss1	82	72.052	ENSPSIG00000003849	CMSS1	100	72.052	Pelodiscus_sinensis
ENSPEMG00000016384	Cmss1	84	57.203	ENSPMGG00000010286	cmss1	100	58.051	Periophthalmus_magnuspinnatus
ENSPEMG00000016384	Cmss1	73	53.431	ENSPMAG00000001146	cmss1	99	53.960	Petromyzon_marinus
ENSPEMG00000016384	Cmss1	91	71.538	ENSPCIG00000015656	CMSS1	98	71.538	Phascolarctos_cinereus
ENSPEMG00000016384	Cmss1	100	52.098	ENSPFOG00000016849	cmss1	100	52.265	Poecilia_formosa
ENSPEMG00000016384	Cmss1	100	51.748	ENSPLAG00000008323	cmss1	100	51.916	Poecilia_latipinna
ENSPEMG00000016384	Cmss1	100	51.557	ENSPMEG00000021020	cmss1	100	52.759	Poecilia_mexicana
ENSPEMG00000016384	Cmss1	89	54.724	ENSPREG00000007618	cmss1	90	52.593	Poecilia_reticulata
ENSPEMG00000016384	Cmss1	100	83.214	ENSPPYG00000013606	CMSS1	100	83.214	Pongo_abelii
ENSPEMG00000016384	Cmss1	100	83.571	ENSPCOG00000020035	CMSS1	100	83.571	Propithecus_coquereli
ENSPEMG00000016384	Cmss1	100	73.214	ENSPVAG00000017031	CMSS1	100	73.214	Pteropus_vampyrus
ENSPEMG00000016384	Cmss1	91	50.566	ENSPNYG00000013428	cmss1	97	51.698	Pundamilia_nyererei
ENSPEMG00000016384	Cmss1	100	49.320	ENSPNAG00000007912	cmss1	100	49.660	Pygocentrus_nattereri
ENSPEMG00000016384	Cmss1	92	88.417	ENSRNOG00000027888	Cmss1	100	88.077	Rattus_norvegicus
ENSPEMG00000016384	Cmss1	100	82.143	ENSRBIG00000037931	CMSS1	100	82.143	Rhinopithecus_bieti
ENSPEMG00000016384	Cmss1	100	82.143	ENSRROG00000042910	CMSS1	100	82.143	Rhinopithecus_roxellana
ENSPEMG00000016384	Cmss1	92	81.467	ENSSBOG00000030980	CMSS1	99	81.467	Saimiri_boliviensis_boliviensis
ENSPEMG00000016384	Cmss1	88	71.315	ENSSHAG00000009321	CMSS1	99	71.315	Sarcophilus_harrisii
ENSPEMG00000016384	Cmss1	100	54.915	ENSSFOG00015001509	cmss1	100	56.207	Scleropages_formosus
ENSPEMG00000016384	Cmss1	100	50.671	ENSSMAG00000001653	cmss1	100	50.671	Scophthalmus_maximus
ENSPEMG00000016384	Cmss1	100	53.472	ENSSDUG00000007719	cmss1	100	53.472	Seriola_dumerili
ENSPEMG00000016384	Cmss1	74	63.592	ENSSLDG00000012300	cmss1	85	54.902	Seriola_lalandi_dorsalis
ENSPEMG00000016384	Cmss1	100	67.857	ENSSARG00000003584	CMSS1	100	67.857	Sorex_araneus
ENSPEMG00000016384	Cmss1	81	68.142	ENSSPUG00000003865	CMSS1	100	68.142	Sphenodon_punctatus
ENSPEMG00000016384	Cmss1	74	63.592	ENSSPAG00000019182	cmss1	82	54.340	Stegastes_partitus
ENSPEMG00000016384	Cmss1	100	84.643	ENSSSCG00000011970	CMSS1	100	84.643	Sus_scrofa
ENSPEMG00000016384	Cmss1	82	65.502	ENSTGUG00000013635	CMSS1	100	65.502	Taeniopygia_guttata
ENSPEMG00000016384	Cmss1	100	49.831	ENSTRUG00000015265	cmss1	100	49.492	Takifugu_rubripes
ENSPEMG00000016384	Cmss1	72	56.436	ENSTNIG00000002880	cmss1	99	49.097	Tetraodon_nigroviridis
ENSPEMG00000016384	Cmss1	100	56.786	ENSTBEG00000016722	CMSS1	100	56.786	Tupaia_belangeri
ENSPEMG00000016384	Cmss1	100	81.071	ENSTTRG00000001562	CMSS1	100	81.071	Tursiops_truncatus
ENSPEMG00000016384	Cmss1	97	81.818	ENSUAMG00000024209	CMSS1	100	87.444	Ursus_americanus
ENSPEMG00000016384	Cmss1	93	84.556	ENSUMAG00000001983	CMSS1	99	84.766	Ursus_maritimus
ENSPEMG00000016384	Cmss1	100	64.286	ENSVPAG00000000263	CMSS1	100	64.286	Vicugna_pacos
ENSPEMG00000016384	Cmss1	88	83.740	ENSVVUG00000021647	-	100	83.740	Vulpes_vulpes
ENSPEMG00000016384	Cmss1	88	78.862	ENSVVUG00000007776	-	98	78.313	Vulpes_vulpes
ENSPEMG00000016384	Cmss1	100	55.000	ENSXETG00000011858	cmss1	100	55.000	Xenopus_tropicalis
ENSPEMG00000016384	Cmss1	74	61.650	ENSXCOG00000018724	cmss1	69	61.386	Xiphophorus_couchianus
ENSPEMG00000016384	Cmss1	74	61.650	ENSXMAG00000011243	cmss1	76	61.386	Xiphophorus_maculatus