EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000016389 (Gene tree)
Gene ID: 102920800
Gene Symbol: Ddx1
Alias: -
Full Name: DEAD-box helicase 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 28398 bases
Position: chrKI615395.1:1400274-1428671
Accession: 102920800
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000017510	DEAD	PF00270.29	5e-79	1	1
ENSPEMP00000017503	DEAD	PF00270.29	5.1e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000021826	-	2525	XM_006976588	ENSPEMP00000017503	740 (aa)	XP_006976650	UPI00042AF37D
ENSPEMT00000021834	-	2211	-	ENSPEMP00000017510	736 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000016389's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000016389's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000016389	Ddx1	54	42.424	ENSPEMG00000009238	Ddx49	73	42.424
ENSPEMG00000016389	Ddx1	57	43.103	ENSPEMG00000010715	Ddx59	58	43.103
ENSPEMG00000016389	Ddx1	56	46.875	ENSPEMG00000009746	Ddx47	75	47.541
ENSPEMG00000016389	Ddx1	56	40.580	ENSPEMG00000000049	Ddx41	57	40.580
ENSPEMG00000016389	Ddx1	57	39.344	ENSPEMG00000014798	Ddx31	58	39.344
ENSPEMG00000016389	Ddx1	53	38.710	ENSPEMG00000003395	Ddx28	67	38.710
ENSPEMG00000016389	Ddx1	55	41.509	ENSPEMG00000003263	Ddx52	60	41.071
ENSPEMG00000016389	Ddx1	52	45.098	ENSPEMG00000000206	Ddx6	67	45.098

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000016389	Ddx1	100	97.432	ENSG00000079785	DDX1	100	97.432	Homo_sapiens
ENSPEMG00000016389	Ddx1	100	84.730	ENSAPOG00000003166	ddx1	100	84.730	Acanthochromis_polyacanthus
ENSPEMG00000016389	Ddx1	99	97.158	ENSAMEG00000001071	DDX1	99	97.158	Ailuropoda_melanoleuca
ENSPEMG00000016389	Ddx1	89	83.359	ENSACIG00000017422	ddx1	99	82.748	Amphilophus_citrinellus
ENSPEMG00000016389	Ddx1	89	82.675	ENSAOCG00000015436	ddx1	94	84.434	Amphiprion_ocellaris
ENSPEMG00000016389	Ddx1	100	85.541	ENSAPEG00000007699	ddx1	100	85.541	Amphiprion_percula
ENSPEMG00000016389	Ddx1	94	84.814	ENSATEG00000003965	ddx1	98	84.427	Anabas_testudineus
ENSPEMG00000016389	Ddx1	100	92.339	ENSAPLG00000011093	DDX1	100	92.339	Anas_platyrhynchos
ENSPEMG00000016389	Ddx1	94	91.404	ENSACAG00000011036	DDX1	99	91.404	Anolis_carolinensis
ENSPEMG00000016389	Ddx1	100	97.568	ENSANAG00000037912	DDX1	100	97.568	Aotus_nancymaae
ENSPEMG00000016389	Ddx1	99	85.286	ENSACLG00000008850	ddx1	99	84.251	Astatotilapia_calliptera
ENSPEMG00000016389	Ddx1	100	85.541	ENSAMXG00000002100	ddx1	100	85.541	Astyanax_mexicanus
ENSPEMG00000016389	Ddx1	100	96.892	ENSBTAG00000009906	DDX1	100	96.892	Bos_taurus
ENSPEMG00000016389	Ddx1	98	47.703	WBGene00021938	Y55F3BR.1	98	47.703	Caenorhabditis_elegans
ENSPEMG00000016389	Ddx1	100	97.838	ENSCJAG00000007076	DDX1	100	97.838	Callithrix_jacchus
ENSPEMG00000016389	Ddx1	100	97.297	ENSCAFG00000003686	DDX1	100	97.297	Canis_familiaris
ENSPEMG00000016389	Ddx1	100	97.297	ENSCAFG00020026083	DDX1	100	97.297	Canis_lupus_dingo
ENSPEMG00000016389	Ddx1	100	96.757	ENSCHIG00000011046	DDX1	100	96.757	Capra_hircus
ENSPEMG00000016389	Ddx1	99	69.607	ENSTSYG00000037396	-	98	72.920	Carlito_syrichta
ENSPEMG00000016389	Ddx1	100	98.108	ENSTSYG00000002477	-	100	98.108	Carlito_syrichta
ENSPEMG00000016389	Ddx1	87	76.827	ENSCAPG00000008906	-	93	76.827	Cavia_aperea
ENSPEMG00000016389	Ddx1	88	94.487	ENSCPOG00000009816	-	96	94.487	Cavia_porcellus
ENSPEMG00000016389	Ddx1	68	96.215	ENSCPOG00000032467	-	100	96.215	Cavia_porcellus
ENSPEMG00000016389	Ddx1	100	97.568	ENSCCAG00000030085	DDX1	100	97.568	Cebus_capucinus
ENSPEMG00000016389	Ddx1	100	97.432	ENSCATG00000033924	DDX1	100	97.432	Cercocebus_atys
ENSPEMG00000016389	Ddx1	100	97.162	ENSCLAG00000005434	DDX1	100	97.162	Chinchilla_lanigera
ENSPEMG00000016389	Ddx1	100	97.432	ENSCSAG00000007883	DDX1	100	97.432	Chlorocebus_sabaeus
ENSPEMG00000016389	Ddx1	74	97.150	ENSCHOG00000002171	DDX1	74	97.150	Choloepus_hoffmanni
ENSPEMG00000016389	Ddx1	100	87.246	ENSCPBG00000013330	DDX1	99	92.593	Chrysemys_picta_bellii
ENSPEMG00000016389	Ddx1	100	65.952	ENSCING00000001176	-	100	65.775	Ciona_intestinalis
ENSPEMG00000016389	Ddx1	98	60.440	ENSCSAVG00000003028	-	99	60.440	Ciona_savignyi
ENSPEMG00000016389	Ddx1	100	97.297	ENSCANG00000031530	DDX1	100	97.297	Colobus_angolensis_palliatus
ENSPEMG00000016389	Ddx1	100	98.649	ENSCGRG00001013025	Ddx1	100	98.649	Cricetulus_griseus_chok1gshd
ENSPEMG00000016389	Ddx1	100	98.649	ENSCGRG00000000676	Ddx1	100	98.649	Cricetulus_griseus_crigri
ENSPEMG00000016389	Ddx1	99	84.877	ENSCSEG00000002630	ddx1	100	84.877	Cynoglossus_semilaevis
ENSPEMG00000016389	Ddx1	99	84.332	ENSCVAG00000020927	ddx1	100	84.332	Cyprinodon_variegatus
ENSPEMG00000016389	Ddx1	100	84.865	ENSDARG00000032117	ddx1	100	84.877	Danio_rerio
ENSPEMG00000016389	Ddx1	100	96.892	ENSDNOG00000006905	DDX1	100	96.892	Dasypus_novemcinctus
ENSPEMG00000016389	Ddx1	100	98.108	ENSDORG00000012847	Ddx1	100	98.108	Dipodomys_ordii
ENSPEMG00000016389	Ddx1	98	59.234	FBgn0015075	Ddx1	99	59.781	Drosophila_melanogaster
ENSPEMG00000016389	Ddx1	100	86.216	ENSETEG00000014259	DDX1	100	86.216	Echinops_telfairi
ENSPEMG00000016389	Ddx1	64	78.178	ENSEBUG00000009800	-	99	78.178	Eptatretus_burgeri
ENSPEMG00000016389	Ddx1	100	97.027	ENSEASG00005009335	DDX1	92	97.027	Equus_asinus_asinus
ENSPEMG00000016389	Ddx1	95	96.987	ENSECAG00000016396	DDX1	100	96.987	Equus_caballus
ENSPEMG00000016389	Ddx1	89	93.974	ENSEEUG00000001606	DDX1	89	93.974	Erinaceus_europaeus
ENSPEMG00000016389	Ddx1	100	82.861	ENSELUG00000006743	ddx1	100	82.861	Esox_lucius
ENSPEMG00000016389	Ddx1	100	97.838	ENSFCAG00000004680	DDX1	100	97.838	Felis_catus
ENSPEMG00000016389	Ddx1	100	92.297	ENSFALG00000008696	DDX1	100	92.297	Ficedula_albicollis
ENSPEMG00000016389	Ddx1	100	97.297	ENSFDAG00000021305	DDX1	100	97.297	Fukomys_damarensis
ENSPEMG00000016389	Ddx1	100	83.243	ENSFHEG00000008444	ddx1	100	83.243	Fundulus_heteroclitus
ENSPEMG00000016389	Ddx1	100	81.965	ENSGMOG00000011300	ddx1	100	81.965	Gadus_morhua
ENSPEMG00000016389	Ddx1	100	93.378	ENSGALG00000016461	DDX1	100	93.378	Gallus_gallus
ENSPEMG00000016389	Ddx1	100	83.919	ENSGAFG00000004706	ddx1	100	83.919	Gambusia_affinis
ENSPEMG00000016389	Ddx1	100	82.838	ENSGACG00000011162	ddx1	100	82.838	Gasterosteus_aculeatus
ENSPEMG00000016389	Ddx1	100	93.649	ENSGAGG00000021020	DDX1	100	93.649	Gopherus_agassizii
ENSPEMG00000016389	Ddx1	100	97.432	ENSGGOG00000012482	DDX1	100	97.432	Gorilla_gorilla
ENSPEMG00000016389	Ddx1	100	85.135	ENSHBUG00000014069	ddx1	100	85.135	Haplochromis_burtoni
ENSPEMG00000016389	Ddx1	100	97.432	ENSHGLG00000000801	DDX1	100	97.432	Heterocephalus_glaber_female
ENSPEMG00000016389	Ddx1	99	97.411	ENSHGLG00100000711	DDX1	100	97.411	Heterocephalus_glaber_male
ENSPEMG00000016389	Ddx1	100	84.595	ENSHCOG00000011492	ddx1	96	84.595	Hippocampus_comes
ENSPEMG00000016389	Ddx1	100	83.649	ENSIPUG00000003494	ddx1	100	83.649	Ictalurus_punctatus
ENSPEMG00000016389	Ddx1	100	97.826	ENSSTOG00000003977	DDX1	100	98.093	Ictidomys_tridecemlineatus
ENSPEMG00000016389	Ddx1	89	93.435	ENSJJAG00000013315	Ddx1	100	93.435	Jaculus_jaculus
ENSPEMG00000016389	Ddx1	100	85.946	ENSKMAG00000011340	ddx1	100	85.946	Kryptolebias_marmoratus
ENSPEMG00000016389	Ddx1	89	79.389	ENSLBEG00000008692	ddx1	99	79.389	Labrus_bergylta
ENSPEMG00000016389	Ddx1	100	87.703	ENSLACG00000010529	DDX1	100	87.703	Latimeria_chalumnae
ENSPEMG00000016389	Ddx1	100	86.729	ENSLOCG00000016473	ddx1	100	86.729	Lepisosteus_oculatus
ENSPEMG00000016389	Ddx1	99	97.015	ENSLAFG00000002213	DDX1	99	97.015	Loxodonta_africana
ENSPEMG00000016389	Ddx1	100	97.432	ENSMFAG00000033987	DDX1	100	97.432	Macaca_fascicularis
ENSPEMG00000016389	Ddx1	100	97.432	ENSMMUG00000023437	DDX1	100	97.432	Macaca_mulatta
ENSPEMG00000016389	Ddx1	100	97.432	ENSMNEG00000029189	DDX1	100	97.432	Macaca_nemestrina
ENSPEMG00000016389	Ddx1	100	97.297	ENSMLEG00000030787	DDX1	100	97.297	Mandrillus_leucophaeus
ENSPEMG00000016389	Ddx1	100	85.405	ENSMAMG00000015916	ddx1	100	85.405	Mastacembelus_armatus
ENSPEMG00000016389	Ddx1	99	85.286	ENSMZEG00005015207	ddx1	99	84.251	Maylandia_zebra
ENSPEMG00000016389	Ddx1	99	89.160	ENSMGAG00000014025	DDX1	100	89.160	Meleagris_gallopavo
ENSPEMG00000016389	Ddx1	64	98.182	ENSMAUG00000016156	Ddx1	100	98.182	Mesocricetus_auratus
ENSPEMG00000016389	Ddx1	100	97.432	ENSMICG00000001023	DDX1	100	97.432	Microcebus_murinus
ENSPEMG00000016389	Ddx1	100	98.649	ENSMOCG00000000257	Ddx1	100	98.649	Microtus_ochrogaster
ENSPEMG00000016389	Ddx1	89	83.537	ENSMMOG00000015397	ddx1	99	83.537	Mola_mola
ENSPEMG00000016389	Ddx1	99	94.823	ENSMODG00000010275	DDX1	99	94.823	Monodelphis_domestica
ENSPEMG00000016389	Ddx1	100	84.865	ENSMALG00000016409	ddx1	100	84.865	Monopterus_albus
ENSPEMG00000016389	Ddx1	100	98.784	MGP_CAROLIEiJ_G0017622	Ddx1	100	98.784	Mus_caroli
ENSPEMG00000016389	Ddx1	100	98.378	ENSMUSG00000037149	Ddx1	100	98.947	Mus_musculus
ENSPEMG00000016389	Ddx1	100	98.514	MGP_PahariEiJ_G0029378	Ddx1	100	98.514	Mus_pahari
ENSPEMG00000016389	Ddx1	100	98.378	MGP_SPRETEiJ_G0018464	Ddx1	100	98.378	Mus_spretus
ENSPEMG00000016389	Ddx1	100	97.568	ENSMPUG00000013606	DDX1	100	97.568	Mustela_putorius_furo
ENSPEMG00000016389	Ddx1	99	96.467	ENSMLUG00000003027	DDX1	98	96.467	Myotis_lucifugus
ENSPEMG00000016389	Ddx1	99	98.774	ENSNGAG00000015783	Ddx1	100	98.774	Nannospalax_galili
ENSPEMG00000016389	Ddx1	79	80.796	ENSNBRG00000020677	ddx1	94	80.796	Neolamprologus_brichardi
ENSPEMG00000016389	Ddx1	100	97.568	ENSNLEG00000014417	DDX1	100	97.568	Nomascus_leucogenys
ENSPEMG00000016389	Ddx1	99	92.886	ENSMEUG00000008254	DDX1	99	92.886	Notamacropus_eugenii
ENSPEMG00000016389	Ddx1	92	82.674	ENSOPRG00000004290	DDX1	100	69.324	Ochotona_princeps
ENSPEMG00000016389	Ddx1	100	97.162	ENSODEG00000000569	DDX1	100	97.162	Octodon_degus
ENSPEMG00000016389	Ddx1	100	85.830	ENSONIG00000000513	ddx1	100	85.830	Oreochromis_niloticus
ENSPEMG00000016389	Ddx1	76	91.935	ENSOANG00000005450	DDX1	99	91.935	Ornithorhynchus_anatinus
ENSPEMG00000016389	Ddx1	100	97.838	ENSOCUG00000007010	DDX1	100	97.838	Oryctolagus_cuniculus
ENSPEMG00000016389	Ddx1	100	84.595	ENSORLG00000016709	ddx1	100	84.595	Oryzias_latipes
ENSPEMG00000016389	Ddx1	99	84.332	ENSORLG00020003290	ddx1	100	84.332	Oryzias_latipes_hni
ENSPEMG00000016389	Ddx1	100	84.189	ENSORLG00015022438	ddx1	100	84.189	Oryzias_latipes_hsok
ENSPEMG00000016389	Ddx1	100	79.730	ENSOMEG00000017620	ddx1	100	78.243	Oryzias_melastigma
ENSPEMG00000016389	Ddx1	99	97.283	ENSOGAG00000008730	DDX1	100	97.283	Otolemur_garnettii
ENSPEMG00000016389	Ddx1	99	96.467	ENSOARG00000016369	DDX1	100	96.467	Ovis_aries
ENSPEMG00000016389	Ddx1	100	97.297	ENSPPAG00000027432	DDX1	100	97.297	Pan_paniscus
ENSPEMG00000016389	Ddx1	100	97.838	ENSPPRG00000020556	DDX1	100	97.838	Panthera_pardus
ENSPEMG00000016389	Ddx1	100	97.703	ENSPTIG00000008267	DDX1	100	97.703	Panthera_tigris_altaica
ENSPEMG00000016389	Ddx1	100	97.297	ENSPTRG00000011670	DDX1	100	97.297	Pan_troglodytes
ENSPEMG00000016389	Ddx1	100	97.568	ENSPANG00000025185	DDX1	100	97.568	Papio_anubis
ENSPEMG00000016389	Ddx1	100	83.784	ENSPKIG00000012466	ddx1	100	83.924	Paramormyrops_kingsleyae
ENSPEMG00000016389	Ddx1	54	91.315	ENSPSIG00000012292	DDX1	100	91.315	Pelodiscus_sinensis
ENSPEMG00000016389	Ddx1	100	82.432	ENSPMGG00000000782	ddx1	100	80.946	Periophthalmus_magnuspinnatus
ENSPEMG00000016389	Ddx1	99	79.620	ENSPMAG00000009118	-	100	79.620	Petromyzon_marinus
ENSPEMG00000016389	Ddx1	100	95.541	ENSPCIG00000010941	DDX1	100	95.541	Phascolarctos_cinereus
ENSPEMG00000016389	Ddx1	100	84.054	ENSPFOG00000011921	ddx1	100	84.054	Poecilia_formosa
ENSPEMG00000016389	Ddx1	87	82.582	ENSPFOG00000006873	-	100	82.582	Poecilia_formosa
ENSPEMG00000016389	Ddx1	100	83.784	ENSPLAG00000005939	ddx1	100	83.784	Poecilia_latipinna
ENSPEMG00000016389	Ddx1	100	84.189	ENSPMEG00000011140	ddx1	100	84.189	Poecilia_mexicana
ENSPEMG00000016389	Ddx1	100	83.919	ENSPREG00000011751	ddx1	100	83.919	Poecilia_reticulata
ENSPEMG00000016389	Ddx1	100	97.432	ENSPPYG00000012638	DDX1	100	97.432	Pongo_abelii
ENSPEMG00000016389	Ddx1	100	83.649	ENSPCAG00000001491	DDX1	100	83.649	Procavia_capensis
ENSPEMG00000016389	Ddx1	100	95.245	ENSPCOG00000028185	DDX1	100	95.245	Propithecus_coquereli
ENSPEMG00000016389	Ddx1	100	97.162	ENSPVAG00000013618	DDX1	100	97.162	Pteropus_vampyrus
ENSPEMG00000016389	Ddx1	100	85.135	ENSPNYG00000013839	ddx1	100	85.135	Pundamilia_nyererei
ENSPEMG00000016389	Ddx1	89	83.817	ENSPNAG00000017033	ddx1	97	83.817	Pygocentrus_nattereri
ENSPEMG00000016389	Ddx1	100	98.378	ENSRNOG00000006652	Ddx1	100	98.378	Rattus_norvegicus
ENSPEMG00000016389	Ddx1	100	96.216	ENSRBIG00000041664	DDX1	100	96.480	Rhinopithecus_bieti
ENSPEMG00000016389	Ddx1	100	97.027	ENSRROG00000031167	DDX1	100	97.027	Rhinopithecus_roxellana
ENSPEMG00000016389	Ddx1	100	97.703	ENSSBOG00000027577	DDX1	100	97.703	Saimiri_boliviensis_boliviensis
ENSPEMG00000016389	Ddx1	99	87.330	ENSSHAG00000009363	DDX1	99	87.330	Sarcophilus_harrisii
ENSPEMG00000016389	Ddx1	100	83.378	ENSSFOG00015014476	ddx1	100	83.378	Scleropages_formosus
ENSPEMG00000016389	Ddx1	100	83.514	ENSSMAG00000010094	ddx1	100	83.514	Scophthalmus_maximus
ENSPEMG00000016389	Ddx1	100	85.000	ENSSDUG00000012334	ddx1	100	85.000	Seriola_dumerili
ENSPEMG00000016389	Ddx1	100	84.595	ENSSLDG00000025345	ddx1	100	84.595	Seriola_lalandi_dorsalis
ENSPEMG00000016389	Ddx1	99	86.512	ENSSARG00000004536	DDX1	100	86.512	Sorex_araneus
ENSPEMG00000016389	Ddx1	100	90.811	ENSSPUG00000018835	DDX1	100	90.811	Sphenodon_punctatus
ENSPEMG00000016389	Ddx1	100	80.000	ENSSPAG00000023554	ddx1	100	80.000	Stegastes_partitus
ENSPEMG00000016389	Ddx1	100	96.622	ENSSSCG00000008619	DDX1	100	96.622	Sus_scrofa
ENSPEMG00000016389	Ddx1	100	92.027	ENSTGUG00000013096	DDX1	100	92.027	Taeniopygia_guttata
ENSPEMG00000016389	Ddx1	99	84.282	ENSTRUG00000015765	ddx1	99	84.282	Takifugu_rubripes
ENSPEMG00000016389	Ddx1	100	84.730	ENSTNIG00000016309	ddx1	100	84.730	Tetraodon_nigroviridis
ENSPEMG00000016389	Ddx1	99	94.005	ENSTBEG00000008454	DDX1	100	94.005	Tupaia_belangeri
ENSPEMG00000016389	Ddx1	100	95.811	ENSTTRG00000005081	DDX1	100	95.811	Tursiops_truncatus
ENSPEMG00000016389	Ddx1	69	86.837	ENSUAMG00000017375	DDX1	92	86.837	Ursus_americanus
ENSPEMG00000016389	Ddx1	99	97.548	ENSUMAG00000023450	DDX1	100	97.548	Ursus_maritimus
ENSPEMG00000016389	Ddx1	85	98.077	ENSVPAG00000007764	DDX1	85	98.077	Vicugna_pacos
ENSPEMG00000016389	Ddx1	99	97.279	ENSVVUG00000013085	DDX1	96	97.279	Vulpes_vulpes
ENSPEMG00000016389	Ddx1	100	90.811	ENSXETG00000017825	ddx1	100	90.811	Xenopus_tropicalis
ENSPEMG00000016389	Ddx1	100	81.258	ENSXCOG00000007082	ddx1	100	81.258	Xiphophorus_couchianus
ENSPEMG00000016389	Ddx1	100	83.649	ENSXMAG00000004555	ddx1	100	83.649	Xiphophorus_maculatus