EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000016411 (Gene tree)
Gene ID: 102909000
Gene Symbol: -
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 17356 bases
Position: chrKI615634.1:566200-583555
Accession: 102909000
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000017521	RRM_1	PF00076.22	1.9e-28	1	2
ENSPEMP00000017521	RRM_1	PF00076.22	1.9e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000021844	-	3614	XM_006987021	ENSPEMP00000017521	743 (aa)	XP_006987083	UPI00042AC9EE

Gene Model

Click here to download ENSPEMG00000016411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000016411's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000016411	-	66	43.915	ENSPEMG00000001332	Raver2	81	44.268

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000016411	-	100	89.637	ENSG00000161847	RAVER1	100	89.098	Homo_sapiens
ENSPEMG00000016411	-	78	57.957	ENSAPOG00000017267	raver1	72	57.002	Acanthochromis_polyacanthus
ENSPEMG00000016411	-	100	89.502	ENSAMEG00000011738	RAVER1	98	89.098	Ailuropoda_melanoleuca
ENSPEMG00000016411	-	78	58.228	ENSAOCG00000005128	raver1	77	57.087	Amphiprion_ocellaris
ENSPEMG00000016411	-	78	62.338	ENSAPEG00000010854	raver1	83	62.338	Amphiprion_percula
ENSPEMG00000016411	-	97	50.407	ENSATEG00000021004	raver1	91	49.458	Anabas_testudineus
ENSPEMG00000016411	-	84	59.049	ENSACAG00000008386	-	91	59.427	Anolis_carolinensis
ENSPEMG00000016411	-	100	89.502	ENSANAG00000028226	RAVER1	98	89.233	Aotus_nancymaae
ENSPEMG00000016411	-	74	87.500	ENSACLG00000018492	raver1	76	87.500	Astatotilapia_calliptera
ENSPEMG00000016411	-	76	78.333	ENSAMXG00000005132	raver1	81	73.611	Astyanax_mexicanus
ENSPEMG00000016411	-	100	88.291	ENSBTAG00000015721	RAVER1	97	93.500	Bos_taurus
ENSPEMG00000016411	-	100	89.502	ENSCJAG00000005671	RAVER1	98	89.367	Callithrix_jacchus
ENSPEMG00000016411	-	100	89.233	ENSCAFG00000017861	RAVER1	98	88.964	Canis_familiaris
ENSPEMG00000016411	-	100	89.233	ENSCAFG00020024449	RAVER1	100	88.964	Canis_lupus_dingo
ENSPEMG00000016411	-	100	87.887	ENSCHIG00000006718	RAVER1	100	87.752	Capra_hircus
ENSPEMG00000016411	-	68	93.333	ENSTSYG00000027107	RAVER1	91	93.171	Carlito_syrichta
ENSPEMG00000016411	-	90	88.060	ENSCAPG00000002269	RAVER1	100	88.209	Cavia_aperea
ENSPEMG00000016411	-	100	90.175	ENSCPOG00000001008	RAVER1	100	90.444	Cavia_porcellus
ENSPEMG00000016411	-	100	89.233	ENSCCAG00000031723	RAVER1	98	89.098	Cebus_capucinus
ENSPEMG00000016411	-	100	90.040	ENSCATG00000043863	RAVER1	98	90.040	Cercocebus_atys
ENSPEMG00000016411	-	100	91.667	ENSCLAG00000009336	RAVER1	100	90.860	Chinchilla_lanigera
ENSPEMG00000016411	-	100	90.175	ENSCSAG00000007317	RAVER1	84	90.040	Chlorocebus_sabaeus
ENSPEMG00000016411	-	96	62.051	ENSCPBG00000005349	-	96	61.232	Chrysemys_picta_bellii
ENSPEMG00000016411	-	100	90.310	ENSCANG00000008337	RAVER1	98	90.175	Colobus_angolensis_palliatus
ENSPEMG00000016411	-	100	97.981	ENSCGRG00001013260	-	100	97.981	Cricetulus_griseus_chok1gshd
ENSPEMG00000016411	-	100	97.981	ENSCGRG00000015138	-	100	97.981	Cricetulus_griseus_crigri
ENSPEMG00000016411	-	74	82.692	ENSCSEG00000021092	raver1	76	82.692	Cynoglossus_semilaevis
ENSPEMG00000016411	-	100	49.409	ENSCVAG00000013971	raver1	81	61.616	Cyprinodon_variegatus
ENSPEMG00000016411	-	100	81.974	ENSDORG00000010106	-	100	81.184	Dipodomys_ordii
ENSPEMG00000016411	-	66	70.732	ENSETEG00000008201	-	74	87.940	Echinops_telfairi
ENSPEMG00000016411	-	65	94.045	ENSEASG00005010544	-	93	89.838	Equus_asinus_asinus
ENSPEMG00000016411	-	100	91.117	ENSECAG00000024966	RAVER1	98	90.983	Equus_caballus
ENSPEMG00000016411	-	98	51.009	ENSELUG00000023287	raver1	91	51.939	Esox_lucius
ENSPEMG00000016411	-	100	90.713	ENSFCAG00000009435	RAVER1	98	90.310	Felis_catus
ENSPEMG00000016411	-	100	90.457	ENSFDAG00000015113	RAVER1	100	90.188	Fukomys_damarensis
ENSPEMG00000016411	-	98	50.268	ENSGMOG00000003649	raver1	81	60.825	Gadus_morhua
ENSPEMG00000016411	-	66	45.291	ENSGALG00000050608	-	52	45.181	Gallus_gallus
ENSPEMG00000016411	-	96	62.234	ENSGAGG00000011748	-	96	76.344	Gopherus_agassizii
ENSPEMG00000016411	-	100	89.367	ENSGGOG00000006015	RAVER1	98	88.829	Gorilla_gorilla
ENSPEMG00000016411	-	100	90.726	ENSHGLG00000015460	RAVER1	100	89.919	Heterocephalus_glaber_female
ENSPEMG00000016411	-	100	90.726	ENSHGLG00100000812	RAVER1	100	89.919	Heterocephalus_glaber_male
ENSPEMG00000016411	-	98	52.174	ENSIPUG00000013153	raver1	81	60.931	Ictalurus_punctatus
ENSPEMG00000016411	-	100	91.007	ENSSTOG00000003241	RAVER1	100	90.336	Ictidomys_tridecemlineatus
ENSPEMG00000016411	-	100	91.957	ENSJJAG00000018219	-	100	91.421	Jaculus_jaculus
ENSPEMG00000016411	-	97	49.866	ENSKMAG00000017355	raver1	91	49.189	Kryptolebias_marmoratus
ENSPEMG00000016411	-	68	58.185	ENSLBEG00000008268	raver1	68	57.540	Labrus_bergylta
ENSPEMG00000016411	-	90	60.458	ENSLACG00000005809	-	99	60.602	Latimeria_chalumnae
ENSPEMG00000016411	-	96	56.107	ENSLOCG00000007500	raver1	92	53.359	Lepisosteus_oculatus
ENSPEMG00000016411	-	100	89.247	ENSLAFG00000003664	-	100	89.113	Loxodonta_africana
ENSPEMG00000016411	-	100	89.637	ENSMFAG00000037977	RAVER1	98	89.637	Macaca_fascicularis
ENSPEMG00000016411	-	100	89.906	ENSMMUG00000014897	RAVER1	98	89.906	Macaca_mulatta
ENSPEMG00000016411	-	100	89.906	ENSMNEG00000028390	RAVER1	98	89.906	Macaca_nemestrina
ENSPEMG00000016411	-	100	89.906	ENSMLEG00000041959	RAVER1	98	89.906	Mandrillus_leucophaeus
ENSPEMG00000016411	-	74	77.358	ENSMAMG00000012059	raver1	76	77.358	Mastacembelus_armatus
ENSPEMG00000016411	-	74	87.500	ENSMZEG00005019002	raver1	76	87.500	Maylandia_zebra
ENSPEMG00000016411	-	100	97.181	ENSMAUG00000017948	-	100	97.181	Mesocricetus_auratus
ENSPEMG00000016411	-	99	88.544	ENSMICG00000010326	RAVER1	99	88.544	Microcebus_murinus
ENSPEMG00000016411	-	100	97.443	ENSMOCG00000015553	-	100	97.443	Microtus_ochrogaster
ENSPEMG00000016411	-	99	50.533	ENSMMOG00000012093	raver1	76	84.314	Mola_mola
ENSPEMG00000016411	-	97	75.103	ENSMODG00000005584	-	89	74.553	Monodelphis_domestica
ENSPEMG00000016411	-	99	49.191	ENSMALG00000016569	raver1	80	57.171	Monopterus_albus
ENSPEMG00000016411	-	100	95.327	MGP_CAROLIEiJ_G0031860	-	100	95.194	Mus_caroli
ENSPEMG00000016411	-	100	95.995	ENSMUSG00000010205	Raver1	100	95.995	Mus_musculus
ENSPEMG00000016411	-	100	93.891	MGP_PahariEiJ_G0014726	-	100	94.821	Mus_pahari
ENSPEMG00000016411	-	100	95.861	MGP_SPRETEiJ_G0032984	-	100	95.861	Mus_spretus
ENSPEMG00000016411	-	100	90.040	ENSMPUG00000006712	RAVER1	98	89.637	Mustela_putorius_furo
ENSPEMG00000016411	-	100	87.887	ENSMLUG00000012328	RAVER1	100	87.618	Myotis_lucifugus
ENSPEMG00000016411	-	100	92.339	ENSNGAG00000001260	-	100	92.070	Nannospalax_galili
ENSPEMG00000016411	-	78	65.000	ENSNBRG00000010139	raver1	78	58.586	Neolamprologus_brichardi
ENSPEMG00000016411	-	100	89.367	ENSNLEG00000012181	RAVER1	98	89.233	Nomascus_leucogenys
ENSPEMG00000016411	-	90	74.484	ENSMEUG00000003281	-	100	73.708	Notamacropus_eugenii
ENSPEMG00000016411	-	51	85.156	ENSOPRG00000005855	-	51	85.156	Ochotona_princeps
ENSPEMG00000016411	-	100	91.263	ENSODEG00000016260	RAVER1	100	90.457	Octodon_degus
ENSPEMG00000016411	-	78	63.750	ENSONIG00000001559	raver1	99	50.887	Oreochromis_niloticus
ENSPEMG00000016411	-	100	82.100	ENSOCUG00000020918	RAVER1	100	81.292	Oryctolagus_cuniculus
ENSPEMG00000016411	-	70	62.326	ENSORLG00000005458	raver1	67	66.247	Oryzias_latipes
ENSPEMG00000016411	-	70	62.093	ENSORLG00020004392	raver1	67	65.995	Oryzias_latipes_hni
ENSPEMG00000016411	-	70	61.860	ENSORLG00015017222	raver1	67	65.743	Oryzias_latipes_hsok
ENSPEMG00000016411	-	99	54.784	ENSOMEG00000023956	raver1	67	83.673	Oryzias_melastigma
ENSPEMG00000016411	-	100	88.964	ENSOGAG00000011071	RAVER1	98	88.560	Otolemur_garnettii
ENSPEMG00000016411	-	100	86.137	ENSOARG00000015886	RAVER1	98	85.734	Ovis_aries
ENSPEMG00000016411	-	100	89.637	ENSPPAG00000002611	RAVER1	98	89.098	Pan_paniscus
ENSPEMG00000016411	-	100	91.117	ENSPPRG00000009912	RAVER1	98	90.713	Panthera_pardus
ENSPEMG00000016411	-	100	89.637	ENSPTRG00000010466	RAVER1	98	89.098	Pan_troglodytes
ENSPEMG00000016411	-	100	89.906	ENSPANG00000004122	RAVER1	98	89.906	Papio_anubis
ENSPEMG00000016411	-	100	76.933	ENSPCIG00000018695	-	99	79.962	Phascolarctos_cinereus
ENSPEMG00000016411	-	63	66.845	ENSPLAG00000020793	raver1	79	56.805	Poecilia_latipinna
ENSPEMG00000016411	-	99	63.592	ENSPMEG00000011220	raver1	66	58.483	Poecilia_mexicana
ENSPEMG00000016411	-	73	90.698	ENSPREG00000006864	raver1	77	90.698	Poecilia_reticulata
ENSPEMG00000016411	-	100	88.694	ENSPPYG00000010514	RAVER1	84	88.560	Pongo_abelii
ENSPEMG00000016411	-	100	90.336	ENSPCOG00000026605	RAVER1	98	90.201	Propithecus_coquereli
ENSPEMG00000016411	-	100	89.233	ENSPVAG00000003689	RAVER1	100	88.964	Pteropus_vampyrus
ENSPEMG00000016411	-	64	82.353	ENSPNYG00000013284	raver1	65	82.353	Pundamilia_nyererei
ENSPEMG00000016411	-	96	51.984	ENSPNAG00000015476	raver1	80	60.784	Pygocentrus_nattereri
ENSPEMG00000016411	-	100	95.861	ENSRNOG00000020710	Raver1	100	95.861	Rattus_norvegicus
ENSPEMG00000016411	-	100	90.175	ENSRBIG00000034702	RAVER1	98	89.906	Rhinopithecus_bieti
ENSPEMG00000016411	-	100	88.022	ENSRROG00000031186	RAVER1	98	87.752	Rhinopithecus_roxellana
ENSPEMG00000016411	-	100	87.079	ENSSBOG00000023423	RAVER1	98	86.541	Saimiri_boliviensis_boliviensis
ENSPEMG00000016411	-	90	75.588	ENSSHAG00000008181	-	90	74.853	Sarcophilus_harrisii
ENSPEMG00000016411	-	82	54.917	ENSSDUG00000021063	raver1	84	55.094	Seriola_dumerili
ENSPEMG00000016411	-	68	58.527	ENSSLDG00000014505	raver1	66	57.708	Seriola_lalandi_dorsalis
ENSPEMG00000016411	-	79	61.905	ENSSPAG00000000688	raver1	82	57.658	Stegastes_partitus
ENSPEMG00000016411	-	100	91.252	ENSSSCG00000013650	-	98	90.444	Sus_scrofa
ENSPEMG00000016411	-	97	49.797	ENSTRUG00000025641	raver1	65	57.637	Takifugu_rubripes
ENSPEMG00000016411	-	100	89.502	ENSTTRG00000009552	RAVER1	100	89.637	Tursiops_truncatus
ENSPEMG00000016411	-	100	90.983	ENSUAMG00000020385	RAVER1	98	90.579	Ursus_americanus
ENSPEMG00000016411	-	100	89.233	ENSVVUG00000028976	RAVER1	98	88.964	Vulpes_vulpes
ENSPEMG00000016411	-	100	55.366	ENSXETG00000011622	raver1	95	55.586	Xenopus_tropicalis
ENSPEMG00000016411	-	80	60.606	ENSXCOG00000016368	raver1	68	62.981	Xiphophorus_couchianus