EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000016624 (Gene tree)
Gene ID: 102927446
Gene Symbol: Pabpn1l
Alias: -
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 3077 bases
Position: chrKI615644.1:425437-428513
Accession: 102927446
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000017839	RRM_1	PF00076.22	8.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000022163	-	807	XM_006987395	ENSPEMP00000017839	268 (aa)	XP_006987457	-

Gene Model

Click here to download ENSPEMG00000016624's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000016624's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000016624	Pabpn1l	52	59.184	ENSPEMG00000008332	Gm20521	96	50.867

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000016624	Pabpn1l	100	68.817	ENSG00000205022	PABPN1L	100	69.176	Homo_sapiens
ENSPEMG00000016624	Pabpn1l	57	54.375	ENSAPOG00000000685	PABPN1L	64	48.372	Acanthochromis_polyacanthus
ENSPEMG00000016624	Pabpn1l	57	56.688	ENSACIG00000021400	PABPN1L	94	54.706	Amphilophus_citrinellus
ENSPEMG00000016624	Pabpn1l	65	46.857	ENSAOCG00000019844	PABPN1L	66	49.180	Amphiprion_ocellaris
ENSPEMG00000016624	Pabpn1l	65	46.857	ENSAPEG00000019534	PABPN1L	66	49.180	Amphiprion_percula
ENSPEMG00000016624	Pabpn1l	57	53.750	ENSATEG00000011646	PABPN1L	70	49.744	Anabas_testudineus
ENSPEMG00000016624	Pabpn1l	73	56.122	ENSACAG00000013250	PABPN1L	100	56.122	Anolis_carolinensis
ENSPEMG00000016624	Pabpn1l	100	69.314	ENSANAG00000038178	PABPN1L	100	70.397	Aotus_nancymaae
ENSPEMG00000016624	Pabpn1l	55	55.128	ENSACLG00000025147	PABPN1L	72	45.894	Astatotilapia_calliptera
ENSPEMG00000016624	Pabpn1l	60	53.125	ENSAMXG00000010873	PABPN1L	62	53.939	Astyanax_mexicanus
ENSPEMG00000016624	Pabpn1l	100	64.875	ENSBTAG00000023752	-	100	65.233	Bos_taurus
ENSPEMG00000016624	Pabpn1l	53	76.596	ENSBTAG00000006727	-	86	76.596	Bos_taurus
ENSPEMG00000016624	Pabpn1l	100	66.667	ENSCJAG00000045284	PABPN1L	100	69.314	Callithrix_jacchus
ENSPEMG00000016624	Pabpn1l	100	62.456	ENSCHIG00000013987	PABPN1L	100	62.456	Capra_hircus
ENSPEMG00000016624	Pabpn1l	95	65.169	ENSCAPG00000007240	PABPN1L	100	65.169	Cavia_aperea
ENSPEMG00000016624	Pabpn1l	100	67.399	ENSCPOG00000025951	PABPN1L	100	67.399	Cavia_porcellus
ENSPEMG00000016624	Pabpn1l	100	67.754	ENSCCAG00000027631	PABPN1L	100	69.203	Cebus_capucinus
ENSPEMG00000016624	Pabpn1l	100	68.727	ENSCATG00000031060	PABPN1L	100	71.014	Cercocebus_atys
ENSPEMG00000016624	Pabpn1l	100	69.485	ENSCLAG00000000704	PABPN1L	100	69.485	Chinchilla_lanigera
ENSPEMG00000016624	Pabpn1l	100	67.123	ENSCSAG00000002881	PABPN1L	100	68.151	Chlorocebus_sabaeus
ENSPEMG00000016624	Pabpn1l	72	56.853	ENSCPBG00000023441	PABPN1L	61	58.586	Chrysemys_picta_bellii
ENSPEMG00000016624	Pabpn1l	100	65.942	ENSCANG00000039336	PABPN1L	100	68.231	Colobus_angolensis_palliatus
ENSPEMG00000016624	Pabpn1l	100	84.364	ENSCGRG00001013211	Pabpn1l	100	86.545	Cricetulus_griseus_chok1gshd
ENSPEMG00000016624	Pabpn1l	100	84.364	ENSCGRG00000015868	Pabpn1l	100	86.545	Cricetulus_griseus_crigri
ENSPEMG00000016624	Pabpn1l	100	55.830	ENSDNOG00000034677	PABPN1L	100	59.011	Dasypus_novemcinctus
ENSPEMG00000016624	Pabpn1l	100	67.766	ENSEASG00005000777	PABPN1L	100	67.766	Equus_asinus_asinus
ENSPEMG00000016624	Pabpn1l	100	68.498	ENSECAG00000000378	PABPN1L	100	68.498	Equus_caballus
ENSPEMG00000016624	Pabpn1l	100	60.075	ENSEEUG00000004747	PABPN1L	100	60.075	Erinaceus_europaeus
ENSPEMG00000016624	Pabpn1l	65	51.429	ENSELUG00000018385	PABPN1L	75	48.309	Esox_lucius
ENSPEMG00000016624	Pabpn1l	100	67.025	ENSFCAG00000010465	PABPN1L	100	67.025	Felis_catus
ENSPEMG00000016624	Pabpn1l	75	55.665	ENSFALG00000003319	PABPN1L	80	55.665	Ficedula_albicollis
ENSPEMG00000016624	Pabpn1l	100	68.382	ENSFDAG00000021067	PABPN1L	100	68.382	Fukomys_damarensis
ENSPEMG00000016624	Pabpn1l	60	50.307	ENSFHEG00000018295	PABPN1L	62	51.765	Fundulus_heteroclitus
ENSPEMG00000016624	Pabpn1l	51	65.468	ENSGALG00000006242	PABPN1L	79	65.468	Gallus_gallus
ENSPEMG00000016624	Pabpn1l	65	47.778	ENSGACG00000015428	PABPN1L	70	46.575	Gasterosteus_aculeatus
ENSPEMG00000016624	Pabpn1l	70	56.915	ENSGAGG00000010613	PABPN1L	60	56.915	Gopherus_agassizii
ENSPEMG00000016624	Pabpn1l	100	69.091	ENSGGOG00000012670	PABPN1L	100	71.377	Gorilla_gorilla
ENSPEMG00000016624	Pabpn1l	74	45.366	ENSHBUG00000002388	PABPN1L	72	47.847	Haplochromis_burtoni
ENSPEMG00000016624	Pabpn1l	96	66.923	ENSHGLG00000014207	PABPN1L	100	69.231	Heterocephalus_glaber_female
ENSPEMG00000016624	Pabpn1l	96	66.923	ENSHGLG00100005230	PABPN1L	100	69.231	Heterocephalus_glaber_male
ENSPEMG00000016624	Pabpn1l	65	49.153	ENSHCOG00000004151	PABPN1L	74	47.248	Hippocampus_comes
ENSPEMG00000016624	Pabpn1l	56	57.047	ENSIPUG00000023583	PABPN1L	91	50.505	Ictalurus_punctatus
ENSPEMG00000016624	Pabpn1l	100	67.025	ENSSTOG00000020814	PABPN1L	100	67.025	Ictidomys_tridecemlineatus
ENSPEMG00000016624	Pabpn1l	100	72.000	ENSJJAG00000006433	Pabpn1l	100	72.000	Jaculus_jaculus
ENSPEMG00000016624	Pabpn1l	65	48.571	ENSLBEG00000011647	PABPN1L	63	50.000	Labrus_bergylta
ENSPEMG00000016624	Pabpn1l	72	65.816	ENSLAFG00000025902	-	78	65.816	Loxodonta_africana
ENSPEMG00000016624	Pabpn1l	100	68.727	ENSMFAG00000002924	PABPN1L	100	71.014	Macaca_fascicularis
ENSPEMG00000016624	Pabpn1l	100	68.364	ENSMMUG00000012438	PABPN1L	100	70.652	Macaca_mulatta
ENSPEMG00000016624	Pabpn1l	100	68.727	ENSMNEG00000044808	PABPN1L	100	71.014	Macaca_nemestrina
ENSPEMG00000016624	Pabpn1l	100	69.091	ENSMLEG00000032667	PABPN1L	100	71.377	Mandrillus_leucophaeus
ENSPEMG00000016624	Pabpn1l	55	55.128	ENSMZEG00005002186	PABPN1L	72	45.894	Maylandia_zebra
ENSPEMG00000016624	Pabpn1l	100	84.758	ENSMAUG00000014032	Pabpn1l	100	84.758	Mesocricetus_auratus
ENSPEMG00000016624	Pabpn1l	100	69.818	ENSMICG00000028179	PABPN1L	100	69.818	Microcebus_murinus
ENSPEMG00000016624	Pabpn1l	100	82.657	ENSMOCG00000007955	Pabpn1l	100	82.657	Microtus_ochrogaster
ENSPEMG00000016624	Pabpn1l	100	57.143	ENSMODG00000003873	-	100	57.353	Monodelphis_domestica
ENSPEMG00000016624	Pabpn1l	70	47.594	ENSMALG00000016926	PABPN1L	75	48.636	Monopterus_albus
ENSPEMG00000016624	Pabpn1l	100	79.562	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	79.562	Mus_caroli
ENSPEMG00000016624	Pabpn1l	100	77.737	ENSMUSG00000069867	Pabpn1l	100	77.737	Mus_musculus
ENSPEMG00000016624	Pabpn1l	100	78.467	MGP_PahariEiJ_G0023268	Pabpn1l	100	78.467	Mus_pahari
ENSPEMG00000016624	Pabpn1l	100	77.372	MGP_SPRETEiJ_G0032788	Pabpn1l	100	77.372	Mus_spretus
ENSPEMG00000016624	Pabpn1l	96	49.632	ENSMLUG00000003228	PABPN1L	95	49.632	Myotis_lucifugus
ENSPEMG00000016624	Pabpn1l	100	81.250	ENSNGAG00000023992	Pabpn1l	100	81.250	Nannospalax_galili
ENSPEMG00000016624	Pabpn1l	55	55.128	ENSNBRG00000017078	PABPN1L	73	49.485	Neolamprologus_brichardi
ENSPEMG00000016624	Pabpn1l	100	68.498	ENSOPRG00000005597	PABPN1L	100	68.498	Ochotona_princeps
ENSPEMG00000016624	Pabpn1l	100	62.021	ENSODEG00000004649	PABPN1L	100	62.021	Octodon_degus
ENSPEMG00000016624	Pabpn1l	100	55.957	ENSOANG00000013901	PABPN1L	100	57.993	Ornithorhynchus_anatinus
ENSPEMG00000016624	Pabpn1l	57	55.556	ENSORLG00000026560	PABPN1L	56	55.556	Oryzias_latipes
ENSPEMG00000016624	Pabpn1l	57	55.556	ENSORLG00020015068	PABPN1L	56	55.556	Oryzias_latipes_hni
ENSPEMG00000016624	Pabpn1l	57	55.556	ENSORLG00015000397	PABPN1L	56	55.556	Oryzias_latipes_hsok
ENSPEMG00000016624	Pabpn1l	100	67.273	ENSOGAG00000000433	PABPN1L	100	68.364	Otolemur_garnettii
ENSPEMG00000016624	Pabpn1l	100	63.366	ENSOARG00000013682	PABPN1L	100	64.026	Ovis_aries
ENSPEMG00000016624	Pabpn1l	100	69.534	ENSPPAG00000028866	PABPN1L	100	70.251	Pan_paniscus
ENSPEMG00000016624	Pabpn1l	100	66.667	ENSPPRG00000015106	PABPN1L	100	66.667	Panthera_pardus
ENSPEMG00000016624	Pabpn1l	93	61.089	ENSPTIG00000015606	PABPN1L	100	61.089	Panthera_tigris_altaica
ENSPEMG00000016624	Pabpn1l	100	69.534	ENSPTRG00000031120	PABPN1L	100	70.251	Pan_troglodytes
ENSPEMG00000016624	Pabpn1l	100	68.364	ENSPANG00000026039	PABPN1L	100	70.652	Papio_anubis
ENSPEMG00000016624	Pabpn1l	72	54.545	ENSPSIG00000003404	PABPN1L	100	56.061	Pelodiscus_sinensis
ENSPEMG00000016624	Pabpn1l	53	66.667	ENSPCIG00000007038	-	100	66.667	Phascolarctos_cinereus
ENSPEMG00000016624	Pabpn1l	100	69.065	ENSPPYG00000007655	PABPN1L	100	69.892	Pongo_abelii
ENSPEMG00000016624	Pabpn1l	100	69.818	ENSPCOG00000024077	PABPN1L	100	71.273	Propithecus_coquereli
ENSPEMG00000016624	Pabpn1l	100	65.603	ENSPVAG00000002716	PABPN1L	100	67.021	Pteropus_vampyrus
ENSPEMG00000016624	Pabpn1l	55	55.128	ENSPNYG00000004803	PABPN1L	72	45.894	Pundamilia_nyererei
ENSPEMG00000016624	Pabpn1l	100	81.852	ENSRNOG00000029558	Pabpn1l	100	81.852	Rattus_norvegicus
ENSPEMG00000016624	Pabpn1l	100	69.455	ENSRBIG00000030740	PABPN1L	100	71.739	Rhinopithecus_bieti
ENSPEMG00000016624	Pabpn1l	99	68.248	ENSRROG00000035483	-	99	69.455	Rhinopithecus_roxellana
ENSPEMG00000016624	Pabpn1l	100	69.565	ENSRROG00000032240	-	100	70.652	Rhinopithecus_roxellana
ENSPEMG00000016624	Pabpn1l	100	67.754	ENSSBOG00000018410	PABPN1L	100	70.036	Saimiri_boliviensis_boliviensis
ENSPEMG00000016624	Pabpn1l	100	52.542	ENSSHAG00000010001	-	100	52.542	Sarcophilus_harrisii
ENSPEMG00000016624	Pabpn1l	60	48.765	ENSSDUG00000006986	PABPN1L	72	46.411	Seriola_dumerili
ENSPEMG00000016624	Pabpn1l	60	49.383	ENSSLDG00000021845	PABPN1L	72	46.890	Seriola_lalandi_dorsalis
ENSPEMG00000016624	Pabpn1l	94	52.778	ENSSARG00000005178	-	99	52.778	Sorex_araneus
ENSPEMG00000016624	Pabpn1l	72	57.513	ENSSPUG00000007031	PABPN1L	84	57.732	Sphenodon_punctatus
ENSPEMG00000016624	Pabpn1l	79	44.954	ENSSPAG00000017978	PABPN1L	75	45.872	Stegastes_partitus
ENSPEMG00000016624	Pabpn1l	100	69.485	ENSSSCG00000036367	PABPN1L	100	69.373	Sus_scrofa
ENSPEMG00000016624	Pabpn1l	65	48.603	ENSTRUG00000024725	PABPN1L	84	45.946	Takifugu_rubripes
ENSPEMG00000016624	Pabpn1l	100	64.769	ENSTTRG00000004691	PABPN1L	100	67.742	Tursiops_truncatus
ENSPEMG00000016624	Pabpn1l	61	51.176	ENSXETG00000011258	pabpn1l	96	48.148	Xenopus_tropicalis