EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000016628 (Gene tree)
Gene ID: 102903444
Gene Symbol: -
Alias: -
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 3171 bases
Position: chrKI615659.1:1489741-1492911
Accession: 102903444
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000017858	RRM_1	PF00076.22	8.8e-14	1	1
ENSPEMP00000017852	RRM_1	PF00076.22	9.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000022182	-	645	-	ENSPEMP00000017858	214 (aa)	-	-
ENSPEMT00000022176	-	690	XM_016006210	ENSPEMP00000017852	229 (aa)	XP_015861696	UPI00042ADA36

Gene Model

Click here to download ENSPEMG00000016628's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000016628's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000016628	-	100	56.000	ENSAPOG00000000183	-	100	55.600	Acanthochromis_polyacanthus
ENSPEMG00000016628	-	100	50.000	ENSACIG00000020351	-	100	51.136	Amphilophus_citrinellus
ENSPEMG00000016628	-	78	66.842	ENSACIG00000006351	alyref	98	61.905	Amphilophus_citrinellus
ENSPEMG00000016628	-	100	59.926	ENSAOCG00000014012	alyref	100	65.809	Amphiprion_ocellaris
ENSPEMG00000016628	-	100	56.098	ENSAOCG00000019305	-	100	54.400	Amphiprion_ocellaris
ENSPEMG00000016628	-	100	56.098	ENSAPEG00000013527	-	100	54.472	Amphiprion_percula
ENSPEMG00000016628	-	100	59.926	ENSAPEG00000014603	alyref	100	65.809	Amphiprion_percula
ENSPEMG00000016628	-	100	58.633	ENSATEG00000004307	alyref	100	62.590	Anabas_testudineus
ENSPEMG00000016628	-	100	57.422	ENSATEG00000000382	-	100	55.859	Anabas_testudineus
ENSPEMG00000016628	-	59	86.232	ENSAPLG00000014745	-	100	86.957	Anas_platyrhynchos
ENSPEMG00000016628	-	100	57.348	ENSACLG00000008432	alyref	100	64.469	Astatotilapia_calliptera
ENSPEMG00000016628	-	100	52.490	ENSACLG00000010184	-	100	54.167	Astatotilapia_calliptera
ENSPEMG00000016628	-	100	56.055	ENSAMXG00000007359	alyref	100	62.143	Astyanax_mexicanus
ENSPEMG00000016628	-	99	44.528	ENSCING00000013568	-	99	43.985	Ciona_intestinalis
ENSPEMG00000016628	-	99	47.368	ENSCSAVG00000003324	-	99	44.882	Ciona_savignyi
ENSPEMG00000016628	-	100	60.650	ENSCSEG00000017800	alyref	100	65.926	Cynoglossus_semilaevis
ENSPEMG00000016628	-	100	52.191	ENSCVAG00000007789	-	100	51.004	Cyprinodon_variegatus
ENSPEMG00000016628	-	100	63.806	ENSCVAG00000014869	alyref	100	66.418	Cyprinodon_variegatus
ENSPEMG00000016628	-	77	76.166	ENSDARG00000077732	alyref	100	62.143	Danio_rerio
ENSPEMG00000016628	-	97	44.853	FBgn0010774	Ref1	98	41.729	Drosophila_melanogaster
ENSPEMG00000016628	-	99	50.199	ENSEBUG00000008253	alyref	95	52.191	Eptatretus_burgeri
ENSPEMG00000016628	-	100	48.246	ENSEBUG00000006305	alyref	100	46.957	Eptatretus_burgeri
ENSPEMG00000016628	-	100	59.922	ENSELUG00000008849	-	100	59.144	Esox_lucius
ENSPEMG00000016628	-	100	64.444	ENSELUG00000017178	alyref	100	67.407	Esox_lucius
ENSPEMG00000016628	-	67	91.139	ENSFALG00000011923	-	96	88.312	Ficedula_albicollis
ENSPEMG00000016628	-	100	62.774	ENSFHEG00000019426	alyref	100	66.292	Fundulus_heteroclitus
ENSPEMG00000016628	-	100	50.397	ENSFHEG00000004698	-	100	49.794	Fundulus_heteroclitus
ENSPEMG00000016628	-	76	60.638	ENSGMOG00000013122	-	100	59.574	Gadus_morhua
ENSPEMG00000016628	-	100	62.069	ENSGMOG00000009882	alyref	100	62.069	Gadus_morhua
ENSPEMG00000016628	-	100	61.029	ENSGAFG00000006014	alyref	100	62.082	Gambusia_affinis
ENSPEMG00000016628	-	100	47.809	ENSGAFG00000007573	-	100	47.410	Gambusia_affinis
ENSPEMG00000016628	-	100	57.348	ENSHBUG00000020196	alyref	100	64.469	Haplochromis_burtoni
ENSPEMG00000016628	-	100	52.075	ENSHBUG00000001454	-	100	52.809	Haplochromis_burtoni
ENSPEMG00000016628	-	98	50.000	ENSHCOG00000012825	-	94	52.893	Hippocampus_comes
ENSPEMG00000016628	-	100	65.530	ENSIPUG00000009469	alyref	99	66.288	Ictalurus_punctatus
ENSPEMG00000016628	-	82	88.571	ENSSTOG00000016570	-	95	88.571	Ictidomys_tridecemlineatus
ENSPEMG00000016628	-	100	52.000	ENSKMAG00000006462	-	100	52.800	Kryptolebias_marmoratus
ENSPEMG00000016628	-	100	64.469	ENSKMAG00000008912	alyref	100	66.667	Kryptolebias_marmoratus
ENSPEMG00000016628	-	100	64.000	ENSLBEG00000023118	alyref	90	67.470	Labrus_bergylta
ENSPEMG00000016628	-	99	53.441	ENSLBEG00000012930	-	99	52.846	Labrus_bergylta
ENSPEMG00000016628	-	100	50.554	ENSLBEG00000005387	-	100	51.119	Labrus_bergylta
ENSPEMG00000016628	-	92	70.233	ENSLOCG00000013879	alyref	83	74.020	Lepisosteus_oculatus
ENSPEMG00000016628	-	100	61.765	ENSMAMG00000003034	alyref	100	66.176	Mastacembelus_armatus
ENSPEMG00000016628	-	100	51.984	ENSMAMG00000005464	-	100	52.800	Mastacembelus_armatus
ENSPEMG00000016628	-	100	52.107	ENSMZEG00005012096	-	100	53.788	Maylandia_zebra
ENSPEMG00000016628	-	100	57.348	ENSMZEG00005008639	alyref	100	64.469	Maylandia_zebra
ENSPEMG00000016628	-	99	62.030	ENSMMOG00000012458	alyref	97	63.941	Mola_mola
ENSPEMG00000016628	-	99	53.394	ENSMMOG00000007032	-	98	54.299	Mola_mola
ENSPEMG00000016628	-	100	50.769	ENSMALG00000006054	-	100	52.308	Monopterus_albus
ENSPEMG00000016628	-	100	64.286	ENSMLUG00000014372	-	100	64.015	Myotis_lucifugus
ENSPEMG00000016628	-	100	61.364	ENSMLUG00000006521	-	100	61.450	Myotis_lucifugus
ENSPEMG00000016628	-	98	53.704	ENSMLUG00000022178	-	98	56.923	Myotis_lucifugus
ENSPEMG00000016628	-	98	52.941	ENSMLUG00000022467	-	98	51.852	Myotis_lucifugus
ENSPEMG00000016628	-	77	68.539	ENSMLUG00000028605	-	98	55.224	Myotis_lucifugus
ENSPEMG00000016628	-	76	70.520	ENSMLUG00000030671	-	98	53.257	Myotis_lucifugus
ENSPEMG00000016628	-	76	67.760	ENSMLUG00000009247	-	98	56.538	Myotis_lucifugus
ENSPEMG00000016628	-	100	65.385	ENSMLUG00000004098	-	100	63.320	Myotis_lucifugus
ENSPEMG00000016628	-	100	87.500	ENSNGAG00000022014	-	100	87.558	Nannospalax_galili
ENSPEMG00000016628	-	100	52.510	ENSNBRG00000017460	-	100	54.198	Neolamprologus_brichardi
ENSPEMG00000016628	-	79	68.557	ENSNBRG00000001747	alyref	100	64.364	Neolamprologus_brichardi
ENSPEMG00000016628	-	100	52.896	ENSONIG00000003296	-	100	55.598	Oreochromis_niloticus
ENSPEMG00000016628	-	79	70.051	ENSONIG00000019434	alyref	100	63.669	Oreochromis_niloticus
ENSPEMG00000016628	-	99	39.535	ENSORLG00000001620	-	60	47.783	Oryzias_latipes
ENSPEMG00000016628	-	100	59.779	ENSORLG00020011942	alyref	100	64.815	Oryzias_latipes_hni
ENSPEMG00000016628	-	100	50.965	ENSORLG00020015673	-	99	49.805	Oryzias_latipes_hni
ENSPEMG00000016628	-	100	60.223	ENSORLG00015022664	alyref	100	64.925	Oryzias_latipes_hsok
ENSPEMG00000016628	-	100	50.192	ENSORLG00015015143	-	99	50.000	Oryzias_latipes_hsok
ENSPEMG00000016628	-	100	62.313	ENSOMEG00000019176	alyref	100	64.312	Oryzias_melastigma
ENSPEMG00000016628	-	99	52.381	ENSOMEG00000007158	-	97	51.240	Oryzias_melastigma
ENSPEMG00000016628	-	77	92.655	ENSPPAG00000036403	-	69	93.785	Pan_paniscus
ENSPEMG00000016628	-	99	66.142	ENSPKIG00000006233	-	81	64.314	Paramormyrops_kingsleyae
ENSPEMG00000016628	-	100	60.536	ENSPKIG00000007070	alyref	100	63.424	Paramormyrops_kingsleyae
ENSPEMG00000016628	-	99	62.030	ENSPMGG00000016600	alyref	91	63.060	Periophthalmus_magnuspinnatus
ENSPEMG00000016628	-	70	54.491	ENSPMGG00000012994	-	97	54.545	Periophthalmus_magnuspinnatus
ENSPEMG00000016628	-	100	48.413	ENSPFOG00000017094	-	100	47.951	Poecilia_formosa
ENSPEMG00000016628	-	77	75.401	ENSPFOG00000022825	alyref	99	61.871	Poecilia_formosa
ENSPEMG00000016628	-	100	48.413	ENSPLAG00000014380	-	100	47.951	Poecilia_latipinna
ENSPEMG00000016628	-	100	61.624	ENSPLAG00000006948	alyref	100	62.094	Poecilia_latipinna
ENSPEMG00000016628	-	77	75.401	ENSPMEG00000003547	alyref	100	61.871	Poecilia_mexicana
ENSPEMG00000016628	-	100	48.413	ENSPMEG00000023039	-	100	47.951	Poecilia_mexicana
ENSPEMG00000016628	-	100	50.202	ENSPREG00000003649	-	100	50.607	Poecilia_reticulata
ENSPEMG00000016628	-	79	71.123	ENSPREG00000015795	alyref	100	62.455	Poecilia_reticulata
ENSPEMG00000016628	-	100	57.348	ENSPNYG00000017498	alyref	100	64.469	Pundamilia_nyererei
ENSPEMG00000016628	-	99	48.438	ENSPNYG00000002879	-	98	51.538	Pundamilia_nyererei
ENSPEMG00000016628	-	100	57.721	ENSPNAG00000002531	alyref	100	62.132	Pygocentrus_nattereri
ENSPEMG00000016628	-	77	93.820	ENSSBOG00000030924	-	84	94.944	Saimiri_boliviensis_boliviensis
ENSPEMG00000016628	-	99	64.865	ENSSHAG00000000609	-	99	66.376	Sarcophilus_harrisii
ENSPEMG00000016628	-	99	60.000	ENSSHAG00000012866	-	99	60.236	Sarcophilus_harrisii
ENSPEMG00000016628	-	92	75.120	ENSSFOG00015003923	alyref	80	74.641	Scleropages_formosus
ENSPEMG00000016628	-	79	80.328	ENSSFOG00015003678	alyref	84	80.435	Scleropages_formosus
ENSPEMG00000016628	-	100	58.242	ENSSMAG00000009283	alyref	100	63.736	Scophthalmus_maximus
ENSPEMG00000016628	-	100	51.515	ENSSMAG00000011169	-	100	55.000	Scophthalmus_maximus
ENSPEMG00000016628	-	100	59.926	ENSSDUG00000016158	alyref	100	64.706	Seriola_dumerili
ENSPEMG00000016628	-	100	60.806	ENSSLDG00000017803	alyref	100	64.469	Seriola_lalandi_dorsalis
ENSPEMG00000016628	-	99	54.032	ENSSPAG00000017028	-	96	55.020	Stegastes_partitus
ENSPEMG00000016628	-	100	54.510	ENSTRUG00000003051	-	100	52.362	Takifugu_rubripes
ENSPEMG00000016628	-	100	68.675	ENSTNIG00000011595	alyref	100	67.490	Tetraodon_nigroviridis
ENSPEMG00000016628	-	100	57.143	ENSTNIG00000014136	-	100	52.340	Tetraodon_nigroviridis
ENSPEMG00000016628	-	81	91.444	ENSVVUG00000000272	-	86	93.048	Vulpes_vulpes
ENSPEMG00000016628	-	99	60.223	ENSXCOG00000018047	alyref	99	60.595	Xiphophorus_couchianus
ENSPEMG00000016628	-	99	60.223	ENSXMAG00000012218	alyref	99	60.595	Xiphophorus_maculatus
ENSPEMG00000016628	-	100	50.199	ENSXMAG00000018086	-	100	49.794	Xiphophorus_maculatus