EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000016701 (Gene tree)
Gene ID: 102928172
Gene Symbol: Ddx54
Alias: -
Full Name: DEAD-box helicase 54
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 15668 bases
Position: chrKI615323.1:7348138-7363805
Accession: 102928172
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000017962	DBP10CT	PF08147.12	1.3e-18	1	1
ENSPEMP00000017962	ResIII	PF04851.15	1e-06	1	1
ENSPEMP00000017962	DEAD	PF00270.29	7.5e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000022286	-	2989	XM_006970785	ENSPEMP00000017962	874 (aa)	XP_006970847	UPI00042AEDED

Gene Model

Click here to download ENSPEMG00000016701's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000016701's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000016701	Ddx54	50	32.222	ENSPEMG00000010438	-	76	30.672

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000016701	Ddx54	100	86.054	ENSG00000123064	DDX54	100	96.635	Homo_sapiens
ENSPEMG00000016701	Ddx54	95	62.057	ENSAPOG00000008602	ddx54	100	61.872	Acanthochromis_polyacanthus
ENSPEMG00000016701	Ddx54	96	87.618	ENSAMEG00000008775	DDX54	96	87.382	Ailuropoda_melanoleuca
ENSPEMG00000016701	Ddx54	97	61.993	ENSACIG00000019104	ddx54	100	61.600	Amphilophus_citrinellus
ENSPEMG00000016701	Ddx54	95	62.012	ENSAOCG00000008449	ddx54	100	61.986	Amphiprion_ocellaris
ENSPEMG00000016701	Ddx54	95	62.012	ENSAPEG00000014287	ddx54	100	61.986	Amphiprion_percula
ENSPEMG00000016701	Ddx54	95	62.295	ENSATEG00000018529	ddx54	100	61.775	Anabas_testudineus
ENSPEMG00000016701	Ddx54	93	71.098	ENSAPLG00000013191	DDX54	100	71.027	Anas_platyrhynchos
ENSPEMG00000016701	Ddx54	92	69.523	ENSACAG00000004703	DDX54	100	66.475	Anolis_carolinensis
ENSPEMG00000016701	Ddx54	89	77.635	ENSANAG00000032241	-	95	77.184	Aotus_nancymaae
ENSPEMG00000016701	Ddx54	100	76.325	ENSANAG00000032761	-	100	76.099	Aotus_nancymaae
ENSPEMG00000016701	Ddx54	97	61.556	ENSACLG00000013176	ddx54	100	61.512	Astatotilapia_calliptera
ENSPEMG00000016701	Ddx54	96	61.208	ENSAMXG00000009189	ddx54	100	60.959	Astyanax_mexicanus
ENSPEMG00000016701	Ddx54	100	86.545	ENSBTAG00000011930	DDX54	95	87.343	Bos_taurus
ENSPEMG00000016701	Ddx54	87	45.026	WBGene00022378	Y94H6A.5	95	43.652	Caenorhabditis_elegans
ENSPEMG00000016701	Ddx54	94	84.727	ENSCJAG00000010039	DDX54	89	85.455	Callithrix_jacchus
ENSPEMG00000016701	Ddx54	65	83.217	ENSCAFG00000009029	DDX54	99	84.091	Canis_familiaris
ENSPEMG00000016701	Ddx54	100	85.795	ENSCAFG00020017643	DDX54	100	86.932	Canis_lupus_dingo
ENSPEMG00000016701	Ddx54	100	84.545	ENSCHIG00000026798	DDX54	100	84.520	Capra_hircus
ENSPEMG00000016701	Ddx54	99	80.499	ENSTSYG00000007898	DDX54	99	80.294	Carlito_syrichta
ENSPEMG00000016701	Ddx54	93	85.262	ENSCAPG00000001482	DDX54	99	81.441	Cavia_aperea
ENSPEMG00000016701	Ddx54	100	86.023	ENSCPOG00000020649	DDX54	100	86.364	Cavia_porcellus
ENSPEMG00000016701	Ddx54	100	85.893	ENSCCAG00000022625	DDX54	100	86.462	Cebus_capucinus
ENSPEMG00000016701	Ddx54	100	85.844	ENSCATG00000041943	DDX54	100	86.183	Cercocebus_atys
ENSPEMG00000016701	Ddx54	100	85.011	ENSCLAG00000010748	DDX54	100	84.897	Chinchilla_lanigera
ENSPEMG00000016701	Ddx54	99	80.652	ENSCSAG00000002432	DDX54	97	80.920	Chlorocebus_sabaeus
ENSPEMG00000016701	Ddx54	75	66.009	ENSCPBG00000017982	DDX54	85	66.161	Chrysemys_picta_bellii
ENSPEMG00000016701	Ddx54	86	51.823	ENSCING00000004789	-	94	51.527	Ciona_intestinalis
ENSPEMG00000016701	Ddx54	88	50.449	ENSCSAVG00000008916	-	98	67.470	Ciona_savignyi
ENSPEMG00000016701	Ddx54	88	95.745	ENSCANG00000020637	DDX54	99	95.745	Colobus_angolensis_palliatus
ENSPEMG00000016701	Ddx54	100	95.195	ENSCGRG00001014803	Ddx54	100	95.195	Cricetulus_griseus_chok1gshd
ENSPEMG00000016701	Ddx54	100	94.863	ENSCGRG00000002827	Ddx54	100	94.863	Cricetulus_griseus_crigri
ENSPEMG00000016701	Ddx54	95	60.731	ENSCSEG00000016462	ddx54	100	60.455	Cynoglossus_semilaevis
ENSPEMG00000016701	Ddx54	97	60.511	ENSCVAG00000022404	ddx54	100	60.367	Cyprinodon_variegatus
ENSPEMG00000016701	Ddx54	97	63.097	ENSDARG00000105286	ddx54	100	62.385	Danio_rerio
ENSPEMG00000016701	Ddx54	100	84.800	ENSDNOG00000032913	DDX54	100	85.029	Dasypus_novemcinctus
ENSPEMG00000016701	Ddx54	80	84.814	ENSDORG00000003399	Ddx54	95	84.814	Dipodomys_ordii
ENSPEMG00000016701	Ddx54	80	44.851	FBgn0052344	CG32344	88	44.386	Drosophila_melanogaster
ENSPEMG00000016701	Ddx54	50	95.862	ENSETEG00000008430	-	53	95.862	Echinops_telfairi
ENSPEMG00000016701	Ddx54	80	57.741	ENSEBUG00000008886	ddx54	99	57.821	Eptatretus_burgeri
ENSPEMG00000016701	Ddx54	100	77.803	ENSEASG00005009501	DDX54	100	80.025	Equus_asinus_asinus
ENSPEMG00000016701	Ddx54	100	85.812	ENSECAG00000012890	DDX54	100	86.848	Equus_caballus
ENSPEMG00000016701	Ddx54	68	94.937	ENSEEUG00000008296	-	74	94.937	Erinaceus_europaeus
ENSPEMG00000016701	Ddx54	96	61.387	ENSELUG00000013533	ddx54	100	61.642	Esox_lucius
ENSPEMG00000016701	Ddx54	100	85.535	ENSFCAG00000027806	DDX54	100	86.446	Felis_catus
ENSPEMG00000016701	Ddx54	91	71.945	ENSFALG00000007737	DDX54	100	71.945	Ficedula_albicollis
ENSPEMG00000016701	Ddx54	90	88.627	ENSFDAG00000019953	DDX54	100	88.866	Fukomys_damarensis
ENSPEMG00000016701	Ddx54	97	61.156	ENSFHEG00000018425	ddx54	100	61.003	Fundulus_heteroclitus
ENSPEMG00000016701	Ddx54	89	60.652	ENSGMOG00000011746	ddx54	95	61.028	Gadus_morhua
ENSPEMG00000016701	Ddx54	95	70.167	ENSGALG00000007490	DDX54	98	69.809	Gallus_gallus
ENSPEMG00000016701	Ddx54	95	60.308	ENSGAFG00000010336	ddx54	100	59.609	Gambusia_affinis
ENSPEMG00000016701	Ddx54	93	59.929	ENSGACG00000016793	ddx54	100	58.531	Gasterosteus_aculeatus
ENSPEMG00000016701	Ddx54	94	69.866	ENSGAGG00000022803	DDX54	100	69.851	Gopherus_agassizii
ENSPEMG00000016701	Ddx54	100	86.297	ENSGGOG00000010414	DDX54	100	86.636	Gorilla_gorilla
ENSPEMG00000016701	Ddx54	100	85.358	ENSHGLG00000014411	DDX54	100	85.698	Heterocephalus_glaber_female
ENSPEMG00000016701	Ddx54	100	85.568	ENSHGLG00100018511	DDX54	100	85.909	Heterocephalus_glaber_male
ENSPEMG00000016701	Ddx54	96	60.900	ENSHCOG00000019287	ddx54	100	60.575	Hippocampus_comes
ENSPEMG00000016701	Ddx54	96	61.637	ENSIPUG00000015556	Ddx54	100	61.276	Ictalurus_punctatus
ENSPEMG00000016701	Ddx54	87	86.710	ENSSTOG00000004068	DDX54	100	87.097	Ictidomys_tridecemlineatus
ENSPEMG00000016701	Ddx54	99	87.977	ENSJJAG00000015712	Ddx54	100	88.597	Jaculus_jaculus
ENSPEMG00000016701	Ddx54	97	60.234	ENSKMAG00000017520	ddx54	100	60.393	Kryptolebias_marmoratus
ENSPEMG00000016701	Ddx54	96	59.631	ENSLBEG00000019480	ddx54	100	59.818	Labrus_bergylta
ENSPEMG00000016701	Ddx54	94	66.507	ENSLACG00000008944	DDX54	95	66.235	Latimeria_chalumnae
ENSPEMG00000016701	Ddx54	96	64.395	ENSLOCG00000008485	ddx54	100	63.835	Lepisosteus_oculatus
ENSPEMG00000016701	Ddx54	89	75.186	ENSLAFG00000027782	DDX54	100	75.310	Loxodonta_africana
ENSPEMG00000016701	Ddx54	100	85.860	ENSMFAG00000043636	DDX54	100	86.312	Macaca_fascicularis
ENSPEMG00000016701	Ddx54	100	85.068	ENSMMUG00000021795	DDX54	100	85.747	Macaca_mulatta
ENSPEMG00000016701	Ddx54	100	78.620	ENSMNEG00000043605	DDX54	100	79.186	Macaca_nemestrina
ENSPEMG00000016701	Ddx54	99	81.066	ENSMLEG00000038981	DDX54	99	81.540	Mandrillus_leucophaeus
ENSPEMG00000016701	Ddx54	97	61.618	ENSMAMG00000012784	ddx54	99	61.512	Mastacembelus_armatus
ENSPEMG00000016701	Ddx54	97	61.449	ENSMZEG00005018773	ddx54	100	61.406	Maylandia_zebra
ENSPEMG00000016701	Ddx54	93	69.712	ENSMGAG00000009183	DDX54	100	69.398	Meleagris_gallopavo
ENSPEMG00000016701	Ddx54	100	94.966	ENSMAUG00000011051	Ddx54	100	94.966	Mesocricetus_auratus
ENSPEMG00000016701	Ddx54	100	85.747	ENSMICG00000012217	DDX54	100	85.975	Microcebus_murinus
ENSPEMG00000016701	Ddx54	100	94.508	ENSMOCG00000010835	Ddx54	100	94.508	Microtus_ochrogaster
ENSPEMG00000016701	Ddx54	95	60.143	ENSMMOG00000009634	ddx54	100	59.332	Mola_mola
ENSPEMG00000016701	Ddx54	95	76.914	ENSMODG00000003413	DDX54	99	77.033	Monodelphis_domestica
ENSPEMG00000016701	Ddx54	96	62.485	ENSMALG00000022098	ddx54	99	61.795	Monopterus_albus
ENSPEMG00000016701	Ddx54	100	93.143	MGP_CAROLIEiJ_G0027665	Ddx54	100	93.143	Mus_caroli
ENSPEMG00000016701	Ddx54	100	92.580	ENSMUSG00000029599	Ddx54	100	92.922	Mus_musculus
ENSPEMG00000016701	Ddx54	100	93.600	MGP_PahariEiJ_G0024247	Ddx54	100	93.600	Mus_pahari
ENSPEMG00000016701	Ddx54	100	93.151	MGP_SPRETEiJ_G0028665	Ddx54	100	93.151	Mus_spretus
ENSPEMG00000016701	Ddx54	100	85.324	ENSMPUG00000002574	DDX54	100	86.136	Mustela_putorius_furo
ENSPEMG00000016701	Ddx54	100	89.180	ENSNGAG00000021313	Ddx54	100	89.522	Nannospalax_galili
ENSPEMG00000016701	Ddx54	66	78.750	ENSNBRG00000005588	ddx54	75	77.913	Neolamprologus_brichardi
ENSPEMG00000016701	Ddx54	100	86.348	ENSNLEG00000000162	DDX54	100	86.576	Nomascus_leucogenys
ENSPEMG00000016701	Ddx54	80	76.614	ENSMEUG00000015392	DDX54	98	78.846	Notamacropus_eugenii
ENSPEMG00000016701	Ddx54	91	83.721	ENSOPRG00000012000	DDX54	92	78.411	Ochotona_princeps
ENSPEMG00000016701	Ddx54	100	81.870	ENSODEG00000014863	DDX54	100	82.212	Octodon_degus
ENSPEMG00000016701	Ddx54	100	84.938	ENSOCUG00000008932	DDX54	100	85.034	Oryctolagus_cuniculus
ENSPEMG00000016701	Ddx54	96	60.631	ENSORLG00000007385	ddx54	100	59.840	Oryzias_latipes
ENSPEMG00000016701	Ddx54	96	61.013	ENSORLG00020000858	ddx54	100	60.208	Oryzias_latipes_hni
ENSPEMG00000016701	Ddx54	97	60.255	ENSORLG00015006956	ddx54	100	59.840	Oryzias_latipes_hsok
ENSPEMG00000016701	Ddx54	94	61.740	ENSOMEG00000003663	ddx54	100	61.073	Oryzias_melastigma
ENSPEMG00000016701	Ddx54	100	86.234	ENSOGAG00000004210	DDX54	100	86.773	Otolemur_garnettii
ENSPEMG00000016701	Ddx54	100	85.324	ENSOARG00000008363	DDX54	100	85.311	Ovis_aries
ENSPEMG00000016701	Ddx54	100	84.746	ENSPPAG00000042178	DDX54	100	86.005	Pan_paniscus
ENSPEMG00000016701	Ddx54	100	84.396	ENSPPRG00000005223	DDX54	100	85.324	Panthera_pardus
ENSPEMG00000016701	Ddx54	73	74.334	ENSPTIG00000019728	DDX54	86	74.334	Panthera_tigris_altaica
ENSPEMG00000016701	Ddx54	100	85.488	ENSPTRG00000005483	DDX54	100	86.410	Pan_troglodytes
ENSPEMG00000016701	Ddx54	100	85.294	ENSPANG00000008883	DDX54	100	85.973	Papio_anubis
ENSPEMG00000016701	Ddx54	96	63.403	ENSPKIG00000018272	ddx54	98	62.785	Paramormyrops_kingsleyae
ENSPEMG00000016701	Ddx54	53	81.760	ENSPSIG00000005055	DDX54	96	81.760	Pelodiscus_sinensis
ENSPEMG00000016701	Ddx54	93	59.681	ENSPMGG00000010988	ddx54	99	59.562	Periophthalmus_magnuspinnatus
ENSPEMG00000016701	Ddx54	97	61.189	ENSPFOG00000019822	ddx54	100	61.079	Poecilia_formosa
ENSPEMG00000016701	Ddx54	97	60.532	ENSPLAG00000004530	ddx54	100	60.502	Poecilia_latipinna
ENSPEMG00000016701	Ddx54	97	60.417	ENSPMEG00000010803	ddx54	100	60.388	Poecilia_mexicana
ENSPEMG00000016701	Ddx54	97	60.718	ENSPREG00000014372	ddx54	100	60.571	Poecilia_reticulata
ENSPEMG00000016701	Ddx54	100	85.747	ENSPPYG00000004984	DDX54	100	86.425	Pongo_abelii
ENSPEMG00000016701	Ddx54	100	79.408	ENSPCAG00000008462	DDX54	100	79.863	Procavia_capensis
ENSPEMG00000016701	Ddx54	100	85.714	ENSPCOG00000006050	DDX54	100	86.400	Propithecus_coquereli
ENSPEMG00000016701	Ddx54	93	89.691	ENSPVAG00000017347	DDX54	100	76.169	Pteropus_vampyrus
ENSPEMG00000016701	Ddx54	96	59.906	ENSPNAG00000014459	ddx54	97	65.251	Pygocentrus_nattereri
ENSPEMG00000016701	Ddx54	100	92.808	ENSRNOG00000001377	Ddx54	96	92.808	Rattus_norvegicus
ENSPEMG00000016701	Ddx54	100	85.650	ENSRBIG00000032535	DDX54	100	85.763	Rhinopithecus_bieti
ENSPEMG00000016701	Ddx54	100	81.582	ENSRROG00000029557	DDX54	100	81.582	Rhinopithecus_roxellana
ENSPEMG00000016701	Ddx54	87	36.014	YDL031W	-	82	36.265	Saccharomyces_cerevisiae
ENSPEMG00000016701	Ddx54	100	85.568	ENSSBOG00000028194	DDX54	100	86.136	Saimiri_boliviensis_boliviensis
ENSPEMG00000016701	Ddx54	93	73.934	ENSSHAG00000015646	DDX54	99	74.605	Sarcophilus_harrisii
ENSPEMG00000016701	Ddx54	97	62.980	ENSSFOG00015014981	ddx54	100	62.327	Scleropages_formosus
ENSPEMG00000016701	Ddx54	94	58.907	ENSSMAG00000003210	ddx54	100	58.617	Scophthalmus_maximus
ENSPEMG00000016701	Ddx54	94	60.142	ENSSDUG00000004474	ddx54	100	59.393	Seriola_dumerili
ENSPEMG00000016701	Ddx54	95	59.532	ENSSLDG00000010380	ddx54	100	59.326	Seriola_lalandi_dorsalis
ENSPEMG00000016701	Ddx54	96	69.240	ENSSPUG00000014141	DDX54	98	68.171	Sphenodon_punctatus
ENSPEMG00000016701	Ddx54	91	61.118	ENSSPAG00000022918	ddx54	97	60.507	Stegastes_partitus
ENSPEMG00000016701	Ddx54	100	86.591	ENSSSCG00000009876	DDX54	100	87.060	Sus_scrofa
ENSPEMG00000016701	Ddx54	92	70.798	ENSTGUG00000009126	DDX54	100	70.552	Taeniopygia_guttata
ENSPEMG00000016701	Ddx54	95	61.124	ENSTRUG00000014939	ddx54	100	60.410	Takifugu_rubripes
ENSPEMG00000016701	Ddx54	96	62.471	ENSTNIG00000009037	ddx54	100	61.397	Tetraodon_nigroviridis
ENSPEMG00000016701	Ddx54	73	93.917	ENSTBEG00000003783	DDX54	79	93.917	Tupaia_belangeri
ENSPEMG00000016701	Ddx54	97	83.451	ENSTTRG00000016678	DDX54	100	83.465	Tursiops_truncatus
ENSPEMG00000016701	Ddx54	100	86.219	ENSUAMG00000028387	DDX54	100	86.523	Ursus_americanus
ENSPEMG00000016701	Ddx54	83	93.137	ENSUMAG00000010245	DDX54	95	93.590	Ursus_maritimus
ENSPEMG00000016701	Ddx54	100	86.023	ENSVVUG00000010212	DDX54	100	87.159	Vulpes_vulpes
ENSPEMG00000016701	Ddx54	98	62.775	ENSXETG00000016410	ddx54	100	62.775	Xenopus_tropicalis
ENSPEMG00000016701	Ddx54	95	61.059	ENSXCOG00000002909	ddx54	100	60.686	Xiphophorus_couchianus
ENSPEMG00000016701	Ddx54	95	61.340	ENSXMAG00000005312	ddx54	100	60.731	Xiphophorus_maculatus