EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000016757 (Gene tree)
Gene ID: 102906225
Gene Symbol: Zfp408
Alias: -
Full Name: zinc finger protein 408
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 6088 bases
Position: chrKI615543.1:547479-553566
Accession: 102906225
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000018025	zf-C2H2	PF00096.26	5.6e-41	1	8
ENSPEMP00000018025	zf-C2H2	PF00096.26	5.6e-41	2	8
ENSPEMP00000018025	zf-C2H2	PF00096.26	5.6e-41	3	8
ENSPEMP00000018025	zf-C2H2	PF00096.26	5.6e-41	4	8
ENSPEMP00000018025	zf-C2H2	PF00096.26	5.6e-41	5	8
ENSPEMP00000018025	zf-C2H2	PF00096.26	5.6e-41	6	8
ENSPEMP00000018025	zf-C2H2	PF00096.26	5.6e-41	7	8
ENSPEMP00000018025	zf-C2H2	PF00096.26	5.6e-41	8	8
ENSPEMP00000018025	zf-met	PF12874.7	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000022350	-	2225	XM_006984393	ENSPEMP00000018025	552 (aa)	XP_006984455	-

Gene Model

Click here to download ENSPEMG00000016757's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000016757's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000016757	Zfp408	51	39.453	ENSPEMG00000008173	-	78	38.521
ENSPEMG00000016757	Zfp408	51	37.050	ENSPEMG00000020934	-	84	37.050
ENSPEMG00000016757	Zfp408	64	33.333	ENSPEMG00000018947	Zfp784	82	33.333
ENSPEMG00000016757	Zfp408	53	37.743	ENSPEMG00000000860	Zfp94	69	37.190
ENSPEMG00000016757	Zfp408	54	40.690	ENSPEMG00000010242	-	64	40.690
ENSPEMG00000016757	Zfp408	66	40.304	ENSPEMG00000011776	-	86	39.764
ENSPEMG00000016757	Zfp408	52	33.684	ENSPEMG00000015523	Zfp423	84	34.409
ENSPEMG00000016757	Zfp408	60	39.357	ENSPEMG00000000403	-	60	41.007
ENSPEMG00000016757	Zfp408	58	43.077	ENSPEMG00000000870	Repin1	82	43.077
ENSPEMG00000016757	Zfp408	51	38.351	ENSPEMG00000007241	-	87	38.351
ENSPEMG00000016757	Zfp408	51	43.373	ENSPEMG00000014415	Zfp1	64	43.373
ENSPEMG00000016757	Zfp408	51	39.306	ENSPEMG00000023329	-	90	38.214
ENSPEMG00000016757	Zfp408	51	40.889	ENSPEMG00000007595	-	88	40.000
ENSPEMG00000016757	Zfp408	54	40.000	ENSPEMG00000000472	Zfp28	57	40.000
ENSPEMG00000016757	Zfp408	52	39.815	ENSPEMG00000023213	Snai1	58	39.815
ENSPEMG00000016757	Zfp408	51	40.972	ENSPEMG00000007461	-	90	40.351
ENSPEMG00000016757	Zfp408	51	37.949	ENSPEMG00000008817	-	80	39.013
ENSPEMG00000016757	Zfp408	52	36.905	ENSPEMG00000016745	Zfp319	85	36.905
ENSPEMG00000016757	Zfp408	55	39.209	ENSPEMG00000021548	Zfp712	88	39.209
ENSPEMG00000016757	Zfp408	51	35.178	ENSPEMG00000009428	Zfp39	58	37.050
ENSPEMG00000016757	Zfp408	52	40.157	ENSPEMG00000023566	Zfp768	54	40.157
ENSPEMG00000016757	Zfp408	54	39.764	ENSPEMG00000000548	-	82	39.764
ENSPEMG00000016757	Zfp408	52	40.310	ENSPEMG00000022216	-	100	40.310
ENSPEMG00000016757	Zfp408	50	40.647	ENSPEMG00000022834	Zfp709	81	40.647
ENSPEMG00000016757	Zfp408	50	41.606	ENSPEMG00000012225	Snai3	55	41.606
ENSPEMG00000016757	Zfp408	57	48.980	ENSPEMG00000022706	Sall4	62	39.344
ENSPEMG00000016757	Zfp408	52	38.739	ENSPEMG00000020736	Zfp672	94	36.283
ENSPEMG00000016757	Zfp408	53	38.462	ENSPEMG00000024167	Zfp354a	73	38.462
ENSPEMG00000016757	Zfp408	51	37.222	ENSPEMG00000020749	-	82	38.926
ENSPEMG00000016757	Zfp408	52	35.000	ENSPEMG00000016975	Zfp940	74	35.000
ENSPEMG00000016757	Zfp408	59	37.410	ENSPEMG00000023302	-	63	37.410
ENSPEMG00000016757	Zfp408	51	38.000	ENSPEMG00000021923	Zbtb17	57	38.000
ENSPEMG00000016757	Zfp408	56	34.564	ENSPEMG00000016061	Zfp574	73	35.556
ENSPEMG00000016757	Zfp408	53	37.895	ENSPEMG00000014980	Zfp64	69	37.895
ENSPEMG00000016757	Zfp408	53	38.790	ENSPEMG00000018022	-	68	39.286
ENSPEMG00000016757	Zfp408	51	41.117	ENSPEMG00000009113	Zfp628	63	39.655
ENSPEMG00000016757	Zfp408	51	37.056	ENSPEMG00000017339	2610008E11Rik	77	35.357
ENSPEMG00000016757	Zfp408	50	38.075	ENSPEMG00000021937	-	83	38.075
ENSPEMG00000016757	Zfp408	52	37.500	ENSPEMG00000014281	-	100	45.455
ENSPEMG00000016757	Zfp408	52	41.975	ENSPEMG00000022945	-	72	41.975
ENSPEMG00000016757	Zfp408	56	39.416	ENSPEMG00000011739	Snai2	68	39.416
ENSPEMG00000016757	Zfp408	55	36.691	ENSPEMG00000023883	-	87	39.175
ENSPEMG00000016757	Zfp408	57	39.726	ENSPEMG00000007237	Zfp865	79	36.502
ENSPEMG00000016757	Zfp408	51	39.928	ENSPEMG00000016507	Zfp26	78	39.928

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000016757	Zfp408	99	72.072	ENSG00000175213	ZNF408	77	72.072	Homo_sapiens
ENSPEMG00000016757	Zfp408	99	71.607	ENSAMEG00000006904	ZNF408	77	71.607	Ailuropoda_melanoleuca
ENSPEMG00000016757	Zfp408	99	70.856	ENSANAG00000036294	ZNF408	84	70.856	Aotus_nancymaae
ENSPEMG00000016757	Zfp408	99	71.532	ENSCJAG00000019859	ZNF408	77	71.712	Callithrix_jacchus
ENSPEMG00000016757	Zfp408	99	71.150	ENSCAFG00000009143	ZNF408	75	72.035	Canis_familiaris
ENSPEMG00000016757	Zfp408	99	71.150	ENSCAFG00020019155	ZNF408	75	72.035	Canis_lupus_dingo
ENSPEMG00000016757	Zfp408	94	70.245	ENSCHIG00000025346	ZNF408	87	70.377	Capra_hircus
ENSPEMG00000016757	Zfp408	99	70.803	ENSTSYG00000025443	ZNF408	76	70.803	Carlito_syrichta
ENSPEMG00000016757	Zfp408	99	69.910	ENSCCAG00000029472	ZNF408	77	70.270	Cebus_capucinus
ENSPEMG00000016757	Zfp408	72	89.619	ENSCHOG00000009909	ZNF408	74	89.619	Choloepus_hoffmanni
ENSPEMG00000016757	Zfp408	99	86.799	ENSCGRG00001023588	Zfp408	77	86.799	Cricetulus_griseus_chok1gshd
ENSPEMG00000016757	Zfp408	99	86.799	ENSCGRG00000017618	Zfp408	77	86.799	Cricetulus_griseus_crigri
ENSPEMG00000016757	Zfp408	99	67.935	ENSDNOG00000047669	ZNF408	76	67.928	Dasypus_novemcinctus
ENSPEMG00000016757	Zfp408	99	68.421	ENSDORG00000000387	Zfp408	76	68.058	Dipodomys_ordii
ENSPEMG00000016757	Zfp408	96	57.419	ENSETEG00000017621	-	84	59.227	Echinops_telfairi
ENSPEMG00000016757	Zfp408	99	71.581	ENSEASG00005015461	ZNF408	77	71.581	Equus_asinus_asinus
ENSPEMG00000016757	Zfp408	99	72.114	ENSECAG00000010878	ZNF408	77	72.114	Equus_caballus
ENSPEMG00000016757	Zfp408	95	65.905	ENSEEUG00000010466	ZNF408	72	65.524	Erinaceus_europaeus
ENSPEMG00000016757	Zfp408	99	72.432	ENSFCAG00000029105	ZNF408	76	73.091	Felis_catus
ENSPEMG00000016757	Zfp408	54	58.511	ENSGMOG00000007809	-	100	58.511	Gadus_morhua
ENSPEMG00000016757	Zfp408	99	72.072	ENSGGOG00000010152	ZNF408	77	72.072	Gorilla_gorilla
ENSPEMG00000016757	Zfp408	99	69.340	ENSLAFG00000027848	ZNF408	89	70.018	Loxodonta_africana
ENSPEMG00000016757	Zfp408	99	73.694	ENSMICG00000045320	ZNF408	77	73.874	Microcebus_murinus
ENSPEMG00000016757	Zfp408	52	84.000	ENSMODG00000019895	-	81	49.867	Monodelphis_domestica
ENSPEMG00000016757	Zfp408	99	71.658	ENSMPUG00000005490	ZNF408	78	72.014	Mustela_putorius_furo
ENSPEMG00000016757	Zfp408	99	76.051	ENSNGAG00000000309	Zfp408	76	76.600	Nannospalax_galili
ENSPEMG00000016757	Zfp408	100	70.863	ENSNLEG00000014132	ZNF408	77	70.863	Nomascus_leucogenys
ENSPEMG00000016757	Zfp408	88	64.694	ENSOPRG00000009225	ZNF408	68	64.694	Ochotona_princeps
ENSPEMG00000016757	Zfp408	99	71.480	ENSOCUG00000010953	ZNF408	78	71.300	Oryctolagus_cuniculus
ENSPEMG00000016757	Zfp408	99	72.890	ENSOGAG00000034080	ZNF408	90	71.993	Otolemur_garnettii
ENSPEMG00000016757	Zfp408	99	72.072	ENSPPAG00000034993	ZNF408	77	72.072	Pan_paniscus
ENSPEMG00000016757	Zfp408	99	72.252	ENSPPRG00000016866	ZNF408	76	72.909	Panthera_pardus
ENSPEMG00000016757	Zfp408	99	71.480	ENSPTIG00000015467	ZNF408	77	72.122	Panthera_tigris_altaica
ENSPEMG00000016757	Zfp408	99	72.252	ENSPTRG00000003551	ZNF408	77	72.252	Pan_troglodytes
ENSPEMG00000016757	Zfp408	53	56.849	ENSPFOG00000001760	-	70	56.849	Poecilia_formosa
ENSPEMG00000016757	Zfp408	53	57.093	ENSPMEG00000021147	-	56	57.093	Poecilia_mexicana
ENSPEMG00000016757	Zfp408	99	71.661	ENSPPYG00000003318	ZNF408	89	72.253	Pongo_abelii
ENSPEMG00000016757	Zfp408	99	67.942	ENSPCAG00000014001	ZNF408	76	68.182	Procavia_capensis
ENSPEMG00000016757	Zfp408	99	73.561	ENSPCOG00000028698	ZNF408	77	73.561	Propithecus_coquereli
ENSPEMG00000016757	Zfp408	99	70.144	ENSPVAG00000015791	ZNF408	77	70.144	Pteropus_vampyrus
ENSPEMG00000016757	Zfp408	99	70.163	ENSSBOG00000033023	ZNF408	77	70.163	Saimiri_boliviensis_boliviensis
ENSPEMG00000016757	Zfp408	99	70.557	ENSSSCG00000023097	ZNF408	74	70.736	Sus_scrofa
ENSPEMG00000016757	Zfp408	74	89.868	ENSTBEG00000004260	ZNF408	61	89.868	Tupaia_belangeri
ENSPEMG00000016757	Zfp408	99	71.607	ENSUAMG00000026154	ZNF408	77	71.607	Ursus_americanus
ENSPEMG00000016757	Zfp408	99	71.964	ENSUMAG00000014405	ZNF408	77	71.964	Ursus_maritimus
ENSPEMG00000016757	Zfp408	99	71.681	ENSVVUG00000026805	ZNF408	75	71.504	Vulpes_vulpes
ENSPEMG00000016757	Zfp408	55	59.936	ENSXETG00000001980	znf408	83	59.936	Xenopus_tropicalis
ENSPEMG00000016757	Zfp408	54	56.146	ENSXCOG00000002869	-	60	56.146	Xiphophorus_couchianus
ENSPEMG00000016757	Zfp408	55	55.960	ENSXMAG00000018347	-	61	55.960	Xiphophorus_maculatus