EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000017245 (Gene tree)
Gene ID: 102924852
Gene Symbol: Rpusd3
Alias: -
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 4638 bases
Position: chrKI616844.1:133259-137896
Accession: 102924852
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000018745	PseudoU_synth_2	PF00849.22	5.9e-18	1	1
ENSPEMP00000018752	PseudoU_synth_2	PF00849.22	1.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000023082	-	1134	-	ENSPEMP00000018752	377 (aa)	-	-
ENSPEMT00000023075	-	1840	XM_006997819	ENSPEMP00000018745	344 (aa)	XP_006997881	-

Gene Model

Click here to download ENSPEMG00000017245's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000017245's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000017245	Rpusd3	99	73.824	ENSG00000156990	RPUSD3	95	73.824	Homo_sapiens
ENSPEMG00000017245	Rpusd3	100	71.512	ENSAMEG00000016227	RPUSD3	98	71.512	Ailuropoda_melanoleuca
ENSPEMG00000017245	Rpusd3	81	51.957	ENSACAG00000009836	RPUSD3	80	51.957	Anolis_carolinensis
ENSPEMG00000017245	Rpusd3	53	72.826	ENSANAG00000038118	-	88	72.826	Aotus_nancymaae
ENSPEMG00000017245	Rpusd3	58	72.727	ENSANAG00000019945	-	79	72.727	Aotus_nancymaae
ENSPEMG00000017245	Rpusd3	82	52.041	ENSANAG00000007127	-	97	52.577	Aotus_nancymaae
ENSPEMG00000017245	Rpusd3	100	73.547	ENSBTAG00000007968	RPUSD3	100	73.547	Bos_taurus
ENSPEMG00000017245	Rpusd3	100	73.256	ENSCAFG00000029733	RPUSD3	98	73.256	Canis_familiaris
ENSPEMG00000017245	Rpusd3	100	73.256	ENSCAFG00020008582	RPUSD3	98	73.256	Canis_lupus_dingo
ENSPEMG00000017245	Rpusd3	100	72.093	ENSCHIG00000026027	RPUSD3	100	72.093	Capra_hircus
ENSPEMG00000017245	Rpusd3	99	68.966	ENSTSYG00000009994	RPUSD3	98	69.075	Carlito_syrichta
ENSPEMG00000017245	Rpusd3	76	74.525	ENSCAPG00000017559	RPUSD3	99	74.525	Cavia_aperea
ENSPEMG00000017245	Rpusd3	99	63.768	ENSCPOG00000037956	RPUSD3	90	63.768	Cavia_porcellus
ENSPEMG00000017245	Rpusd3	100	73.547	ENSCCAG00000029530	RPUSD3	98	73.547	Cebus_capucinus
ENSPEMG00000017245	Rpusd3	100	73.837	ENSCATG00000036939	RPUSD3	98	73.837	Cercocebus_atys
ENSPEMG00000017245	Rpusd3	99	73.824	ENSCSAG00000010506	RPUSD3	95	73.824	Chlorocebus_sabaeus
ENSPEMG00000017245	Rpusd3	51	78.571	ENSCHOG00000010151	-	67	78.571	Choloepus_hoffmanni
ENSPEMG00000017245	Rpusd3	74	51.362	ENSCPBG00000008825	RPUSD3	95	52.529	Chrysemys_picta_bellii
ENSPEMG00000017245	Rpusd3	100	72.965	ENSCANG00000040711	RPUSD3	98	72.965	Colobus_angolensis_palliatus
ENSPEMG00000017245	Rpusd3	100	89.826	ENSCGRG00001004923	Rpusd3	95	89.826	Cricetulus_griseus_chok1gshd
ENSPEMG00000017245	Rpusd3	100	89.826	ENSCGRG00000018315	Rpusd3	100	89.826	Cricetulus_griseus_crigri
ENSPEMG00000017245	Rpusd3	97	73.653	ENSDNOG00000039160	RPUSD3	88	73.653	Dasypus_novemcinctus
ENSPEMG00000017245	Rpusd3	76	73.585	ENSDORG00000026827	Rpusd3	92	73.585	Dipodomys_ordii
ENSPEMG00000017245	Rpusd3	99	69.027	ENSETEG00000006538	RPUSD3	96	69.027	Echinops_telfairi
ENSPEMG00000017245	Rpusd3	75	34.615	ENSEBUG00000015605	RPUSD3	82	34.615	Eptatretus_burgeri
ENSPEMG00000017245	Rpusd3	100	74.128	ENSEASG00005014160	RPUSD3	96	74.128	Equus_asinus_asinus
ENSPEMG00000017245	Rpusd3	100	74.709	ENSECAG00000019988	RPUSD3	96	74.709	Equus_caballus
ENSPEMG00000017245	Rpusd3	99	55.714	ENSEEUG00000007353	RPUSD3	84	71.226	Erinaceus_europaeus
ENSPEMG00000017245	Rpusd3	100	71.802	ENSFCAG00000014199	RPUSD3	98	71.802	Felis_catus
ENSPEMG00000017245	Rpusd3	79	48.529	ENSFALG00000012968	RPUSD3	99	48.529	Ficedula_albicollis
ENSPEMG00000017245	Rpusd3	77	73.585	ENSFDAG00000008350	RPUSD3	85	71.841	Fukomys_damarensis
ENSPEMG00000017245	Rpusd3	76	52.091	ENSGAGG00000007493	RPUSD3	82	53.232	Gopherus_agassizii
ENSPEMG00000017245	Rpusd3	99	74.118	ENSGGOG00000013120	RPUSD3	98	73.256	Gorilla_gorilla
ENSPEMG00000017245	Rpusd3	90	68.831	ENSHGLG00000011722	RPUSD3	80	68.051	Heterocephalus_glaber_female
ENSPEMG00000017245	Rpusd3	90	68.831	ENSHGLG00100016038	RPUSD3	80	68.051	Heterocephalus_glaber_male
ENSPEMG00000017245	Rpusd3	100	70.349	ENSSTOG00000002125	RPUSD3	98	70.349	Ictidomys_tridecemlineatus
ENSPEMG00000017245	Rpusd3	100	71.802	ENSJJAG00000012679	Rpusd3	100	71.802	Jaculus_jaculus
ENSPEMG00000017245	Rpusd3	99	72.434	ENSLAFG00000017501	RPUSD3	99	72.434	Loxodonta_africana
ENSPEMG00000017245	Rpusd3	100	72.965	ENSMFAG00000032407	RPUSD3	98	72.965	Macaca_fascicularis
ENSPEMG00000017245	Rpusd3	100	68.895	ENSMMUG00000010628	RPUSD3	97	76.282	Macaca_mulatta
ENSPEMG00000017245	Rpusd3	100	72.965	ENSMNEG00000040308	RPUSD3	98	72.965	Macaca_nemestrina
ENSPEMG00000017245	Rpusd3	100	73.256	ENSMLEG00000033940	RPUSD3	98	73.256	Mandrillus_leucophaeus
ENSPEMG00000017245	Rpusd3	100	88.372	ENSMAUG00000015473	Rpusd3	100	88.372	Mesocricetus_auratus
ENSPEMG00000017245	Rpusd3	100	70.930	ENSMICG00000002315	RPUSD3	100	70.930	Microcebus_murinus
ENSPEMG00000017245	Rpusd3	100	86.919	ENSMOCG00000022613	Rpusd3	100	86.919	Microtus_ochrogaster
ENSPEMG00000017245	Rpusd3	88	56.954	ENSMODG00000005210	RPUSD3	79	56.954	Monodelphis_domestica
ENSPEMG00000017245	Rpusd3	100	84.302	MGP_CAROLIEiJ_G0028725	Rpusd3	100	84.302	Mus_caroli
ENSPEMG00000017245	Rpusd3	100	83.721	ENSMUSG00000051169	Rpusd3	100	83.721	Mus_musculus
ENSPEMG00000017245	Rpusd3	100	84.302	MGP_PahariEiJ_G0022476	Rpusd3	100	84.302	Mus_pahari
ENSPEMG00000017245	Rpusd3	100	83.721	MGP_SPRETEiJ_G0029753	Rpusd3	100	83.721	Mus_spretus
ENSPEMG00000017245	Rpusd3	100	69.942	ENSMPUG00000017132	RPUSD3	98	69.942	Mustela_putorius_furo
ENSPEMG00000017245	Rpusd3	100	74.419	ENSMLUG00000006135	RPUSD3	99	74.419	Myotis_lucifugus
ENSPEMG00000017245	Rpusd3	99	77.485	ENSNGAG00000023704	Rpusd3	99	77.485	Nannospalax_galili
ENSPEMG00000017245	Rpusd3	100	59.884	ENSNLEG00000004214	RPUSD3	95	72.772	Nomascus_leucogenys
ENSPEMG00000017245	Rpusd3	74	63.281	ENSMEUG00000013098	-	98	63.281	Notamacropus_eugenii
ENSPEMG00000017245	Rpusd3	99	58.407	ENSOPRG00000002300	RPUSD3	96	58.407	Ochotona_princeps
ENSPEMG00000017245	Rpusd3	77	74.242	ENSODEG00000018137	RPUSD3	91	74.242	Octodon_degus
ENSPEMG00000017245	Rpusd3	83	47.887	ENSOANG00000012081	-	99	47.887	Ornithorhynchus_anatinus
ENSPEMG00000017245	Rpusd3	100	59.829	ENSOCUG00000027885	RPUSD3	100	59.829	Oryctolagus_cuniculus
ENSPEMG00000017245	Rpusd3	91	75.159	ENSOGAG00000012592	RPUSD3	100	75.159	Otolemur_garnettii
ENSPEMG00000017245	Rpusd3	100	73.256	ENSOARG00000005928	RPUSD3	98	73.256	Ovis_aries
ENSPEMG00000017245	Rpusd3	99	73.824	ENSPPAG00000038083	RPUSD3	95	73.824	Pan_paniscus
ENSPEMG00000017245	Rpusd3	100	72.832	ENSPPRG00000024433	RPUSD3	98	72.832	Panthera_pardus
ENSPEMG00000017245	Rpusd3	100	72.965	ENSPTIG00000006828	RPUSD3	100	72.965	Panthera_tigris_altaica
ENSPEMG00000017245	Rpusd3	99	73.529	ENSPTRG00000051760	RPUSD3	98	72.674	Pan_troglodytes
ENSPEMG00000017245	Rpusd3	100	73.547	ENSPANG00000023885	RPUSD3	98	73.547	Papio_anubis
ENSPEMG00000017245	Rpusd3	84	61.111	ENSPCIG00000021901	RPUSD3	84	61.111	Phascolarctos_cinereus
ENSPEMG00000017245	Rpusd3	100	73.256	ENSPPYG00000013676	RPUSD3	98	73.256	Pongo_abelii
ENSPEMG00000017245	Rpusd3	82	54.448	ENSPCAG00000013731	-	97	54.448	Procavia_capensis
ENSPEMG00000017245	Rpusd3	100	75.291	ENSPCOG00000018314	RPUSD3	98	75.291	Propithecus_coquereli
ENSPEMG00000017245	Rpusd3	100	71.512	ENSPVAG00000011107	RPUSD3	98	71.512	Pteropus_vampyrus
ENSPEMG00000017245	Rpusd3	100	79.651	ENSRNOG00000009084	Rpusd3	100	80.059	Rattus_norvegicus
ENSPEMG00000017245	Rpusd3	98	74.777	ENSRBIG00000041230	RPUSD3	95	74.777	Rhinopithecus_bieti
ENSPEMG00000017245	Rpusd3	98	74.777	ENSRROG00000043328	RPUSD3	95	74.777	Rhinopithecus_roxellana
ENSPEMG00000017245	Rpusd3	100	72.674	ENSSBOG00000036106	RPUSD3	98	72.674	Saimiri_boliviensis_boliviensis
ENSPEMG00000017245	Rpusd3	87	57.191	ENSSHAG00000015536	RPUSD3	96	57.191	Sarcophilus_harrisii
ENSPEMG00000017245	Rpusd3	100	72.965	ENSSSCG00000011555	RPUSD3	98	72.965	Sus_scrofa
ENSPEMG00000017245	Rpusd3	68	51.073	ENSTGUG00000008744	RPUSD3	95	50.450	Taeniopygia_guttata
ENSPEMG00000017245	Rpusd3	81	74.368	ENSTBEG00000000176	RPUSD3	94	74.368	Tupaia_belangeri
ENSPEMG00000017245	Rpusd3	100	74.419	ENSTTRG00000007544	RPUSD3	98	74.419	Tursiops_truncatus
ENSPEMG00000017245	Rpusd3	91	74.522	ENSUAMG00000011354	RPUSD3	98	74.522	Ursus_americanus
ENSPEMG00000017245	Rpusd3	100	72.384	ENSUMAG00000018830	RPUSD3	98	72.384	Ursus_maritimus
ENSPEMG00000017245	Rpusd3	100	73.547	ENSVVUG00000023735	RPUSD3	100	73.547	Vulpes_vulpes
ENSPEMG00000017245	Rpusd3	80	48.029	ENSXETG00000023546	rpusd3	98	48.029	Xenopus_tropicalis