EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000017353 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 5035 bases
Position: chrKI615391.1:1940713-1945747
Accession: 102903082
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000018906	MMR_HSR1	PF01926.23	2.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000023238	-	402	XM_015995154	ENSPEMP00000018906	133 (aa)	XP_015850640	UPI00042AEA9F

Gene Model

Click here to download ENSPEMG00000017353's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000017353's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000017353	-	80	53.704	ENSPEMG00000017587	Rab39b	51	53.704
ENSPEMG00000017353	-	80	66.981	ENSPEMG00000014878	-	53	66.981
ENSPEMG00000017353	-	81	59.259	ENSPEMG00000017973	Rab15	51	59.259
ENSPEMG00000017353	-	75	30.693	ENSPEMG00000021476	Arf5	53	30.693
ENSPEMG00000017353	-	78	34.615	ENSPEMG00000013973	-	55	34.615
ENSPEMG00000017353	-	75	43.000	ENSPEMG00000009456	Rab31	51	43.000
ENSPEMG00000017353	-	75	30.693	ENSPEMG00000014956	Arf3	53	30.693
ENSPEMG00000017353	-	81	52.778	ENSPEMG00000014536	Rab11b	50	52.778
ENSPEMG00000017353	-	81	49.074	ENSPEMG00000023981	Rab2b	50	49.074
ENSPEMG00000017353	-	75	43.000	ENSPEMG00000000644	Rab22a	52	43.000
ENSPEMG00000017353	-	80	45.794	ENSPEMG00000000242	Rab14	50	45.794
ENSPEMG00000017353	-	79	52.381	ENSPEMG00000005147	-	50	52.381
ENSPEMG00000017353	-	78	33.654	ENSPEMG00000021912	Nras	62	32.258
ENSPEMG00000017353	-	93	33.065	ENSPEMG00000000572	Kras	62	33.065
ENSPEMG00000017353	-	71	30.097	ENSPEMG00000015048	Arf2	54	30.097
ENSPEMG00000017353	-	80	67.925	ENSPEMG00000009340	Rab1a	52	67.925
ENSPEMG00000017353	-	88	42.735	ENSPEMG00000011803	Rab9b	54	43.103
ENSPEMG00000017353	-	94	47.244	ENSPEMG00000010237	Rab33a	51	47.244
ENSPEMG00000017353	-	87	38.793	ENSPEMG00000016854	Rab9	54	38.793
ENSPEMG00000017353	-	73	32.990	ENSPEMG00000012608	Arl3	51	32.990
ENSPEMG00000017353	-	81	52.778	ENSPEMG00000021125	-	50	52.778
ENSPEMG00000017353	-	82	54.128	ENSPEMG00000023854	Rab30	54	54.128
ENSPEMG00000017353	-	75	30.693	ENSPEMG00000013359	Arf1	53	30.693

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000017353	-	81	97.222	ENSG00000143545	RAB13	53	97.222	Homo_sapiens
ENSPEMG00000017353	-	86	86.087	ENSACIG00000008584	rab13	55	86.087	Amphilophus_citrinellus
ENSPEMG00000017353	-	81	98.148	ENSANAG00000030247	-	53	98.148	Aotus_nancymaae
ENSPEMG00000017353	-	99	79.545	ENSAMXG00000030712	rab13	62	79.545	Astyanax_mexicanus
ENSPEMG00000017353	-	81	97.222	ENSBTAG00000017604	RAB13	53	97.222	Bos_taurus
ENSPEMG00000017353	-	81	97.222	ENSCJAG00000009933	-	53	97.222	Callithrix_jacchus
ENSPEMG00000017353	-	81	97.222	ENSCHIG00000022271	-	53	97.222	Capra_hircus
ENSPEMG00000017353	-	81	97.222	ENSCPOG00000011491	-	53	97.222	Cavia_porcellus
ENSPEMG00000017353	-	81	97.222	ENSCCAG00000028502	-	53	97.222	Cebus_capucinus
ENSPEMG00000017353	-	81	97.222	ENSCATG00000041779	-	53	97.222	Cercocebus_atys
ENSPEMG00000017353	-	81	97.222	ENSCLAG00000006603	-	53	97.222	Chinchilla_lanigera
ENSPEMG00000017353	-	100	97.222	ENSCANG00000036573	-	53	97.222	Colobus_angolensis_palliatus
ENSPEMG00000017353	-	100	99.074	ENSCGRG00001021505	Rab13	67	99.074	Cricetulus_griseus_chok1gshd
ENSPEMG00000017353	-	100	99.074	ENSCGRG00000012126	Rab13	67	99.074	Cricetulus_griseus_crigri
ENSPEMG00000017353	-	99	78.030	ENSCSEG00000002358	rab13	63	78.030	Cynoglossus_semilaevis
ENSPEMG00000017353	-	81	91.667	ENSDARG00000034771	rab13	54	91.667	Danio_rerio
ENSPEMG00000017353	-	81	97.222	ENSDORG00000001591	Rab13	53	97.222	Dipodomys_ordii
ENSPEMG00000017353	-	81	97.222	ENSEASG00005000683	-	53	97.222	Equus_asinus_asinus
ENSPEMG00000017353	-	81	97.222	ENSECAG00000016551	RAB13	53	97.222	Equus_caballus
ENSPEMG00000017353	-	81	98.148	ENSEEUG00000001233	-	53	98.148	Erinaceus_europaeus
ENSPEMG00000017353	-	99	78.030	ENSELUG00000012801	rab13	63	78.030	Esox_lucius
ENSPEMG00000017353	-	81	97.222	ENSFCAG00000045269	-	53	97.222	Felis_catus
ENSPEMG00000017353	-	81	97.222	ENSFDAG00000014469	-	82	97.222	Fukomys_damarensis
ENSPEMG00000017353	-	99	78.788	ENSFHEG00000021221	rab13	68	78.788	Fundulus_heteroclitus
ENSPEMG00000017353	-	86	86.087	ENSGACG00000011925	rab13	53	90.741	Gasterosteus_aculeatus
ENSPEMG00000017353	-	81	96.296	ENSGAGG00000000742	-	54	96.296	Gopherus_agassizii
ENSPEMG00000017353	-	81	97.222	ENSGGOG00000023693	RAB13	53	97.222	Gorilla_gorilla
ENSPEMG00000017353	-	81	98.148	ENSHGLG00000008749	RAB13	53	98.148	Heterocephalus_glaber_female
ENSPEMG00000017353	-	81	98.148	ENSHGLG00100013608	RAB13	53	98.148	Heterocephalus_glaber_male
ENSPEMG00000017353	-	99	78.788	ENSHCOG00000007440	rab13	69	78.788	Hippocampus_comes
ENSPEMG00000017353	-	99	78.788	ENSIPUG00000003199	rab13	62	78.788	Ictalurus_punctatus
ENSPEMG00000017353	-	81	99.074	ENSSTOG00000011222	-	53	99.074	Ictidomys_tridecemlineatus
ENSPEMG00000017353	-	81	98.148	ENSJJAG00000010575	Rab13	53	98.148	Jaculus_jaculus
ENSPEMG00000017353	-	99	77.273	ENSKMAG00000001908	rab13	54	89.815	Kryptolebias_marmoratus
ENSPEMG00000017353	-	99	78.030	ENSLBEG00000026779	rab13	63	78.030	Labrus_bergylta
ENSPEMG00000017353	-	84	94.643	ENSLACG00000008103	-	63	94.643	Latimeria_chalumnae
ENSPEMG00000017353	-	81	97.222	ENSMFAG00000041018	RAB13	53	97.222	Macaca_fascicularis
ENSPEMG00000017353	-	81	97.222	ENSMNEG00000028951	-	53	97.222	Macaca_nemestrina
ENSPEMG00000017353	-	100	97.222	ENSMLEG00000042247	-	53	97.222	Mandrillus_leucophaeus
ENSPEMG00000017353	-	86	86.957	ENSMAMG00000014602	rab13	58	86.957	Mastacembelus_armatus
ENSPEMG00000017353	-	100	99.074	ENSMAUG00000015713	Rab13	67	99.074	Mesocricetus_auratus
ENSPEMG00000017353	-	81	97.222	ENSMICG00000010340	-	53	97.222	Microcebus_murinus
ENSPEMG00000017353	-	100	100.000	ENSMOCG00000021448	Rab13	67	100.000	Microtus_ochrogaster
ENSPEMG00000017353	-	81	99.074	MGP_CAROLIEiJ_G0025227	Rab13	53	99.074	Mus_caroli
ENSPEMG00000017353	-	81	99.074	ENSMUSG00000027935	Rab13	53	99.074	Mus_musculus
ENSPEMG00000017353	-	81	99.074	MGP_PahariEiJ_G0026671	Rab13	53	99.074	Mus_pahari
ENSPEMG00000017353	-	81	98.148	ENSNGAG00000010309	Rab13	53	98.148	Nannospalax_galili
ENSPEMG00000017353	-	99	78.030	ENSNBRG00000004124	rab13	63	78.030	Neolamprologus_brichardi
ENSPEMG00000017353	-	100	97.222	ENSNLEG00000028944	-	55	97.222	Nomascus_leucogenys
ENSPEMG00000017353	-	81	98.148	ENSMEUG00000009667	-	53	98.148	Notamacropus_eugenii
ENSPEMG00000017353	-	81	96.296	ENSODEG00000012634	-	85	96.296	Octodon_degus
ENSPEMG00000017353	-	81	95.370	ENSODEG00000010443	-	53	95.370	Octodon_degus
ENSPEMG00000017353	-	86	86.957	ENSONIG00000006340	rab13	57	86.957	Oreochromis_niloticus
ENSPEMG00000017353	-	81	97.222	ENSOCUG00000006286	-	61	97.222	Oryctolagus_cuniculus
ENSPEMG00000017353	-	99	78.788	ENSOMEG00000008210	rab13	63	78.788	Oryzias_melastigma
ENSPEMG00000017353	-	81	97.222	ENSOGAG00000016969	-	54	97.222	Otolemur_garnettii
ENSPEMG00000017353	-	81	97.222	ENSPPAG00000028435	-	53	97.222	Pan_paniscus
ENSPEMG00000017353	-	81	97.222	ENSPPRG00000008865	-	53	97.222	Panthera_pardus
ENSPEMG00000017353	-	81	97.222	ENSPTRG00000001370	RAB13	53	97.222	Pan_troglodytes
ENSPEMG00000017353	-	81	97.222	ENSPANG00000004479	-	53	97.222	Papio_anubis
ENSPEMG00000017353	-	86	84.348	ENSPMGG00000007680	rab13	54	88.889	Periophthalmus_magnuspinnatus
ENSPEMG00000017353	-	81	98.148	ENSPCIG00000029350	-	53	98.148	Phascolarctos_cinereus
ENSPEMG00000017353	-	86	86.957	ENSPLAG00000005832	RAB13	61	86.957	Poecilia_latipinna
ENSPEMG00000017353	-	86	86.957	ENSPREG00000017567	rab13	54	91.667	Poecilia_reticulata
ENSPEMG00000017353	-	100	97.222	ENSPPYG00000000790	-	53	97.222	Pongo_abelii
ENSPEMG00000017353	-	81	98.148	ENSPCOG00000012189	-	53	98.148	Propithecus_coquereli
ENSPEMG00000017353	-	81	97.222	ENSPVAG00000011095	-	53	97.222	Pteropus_vampyrus
ENSPEMG00000017353	-	99	78.788	ENSPNAG00000004189	rab13	66	78.788	Pygocentrus_nattereri
ENSPEMG00000017353	-	100	100.000	ENSRNOG00000016733	Rab13	67	100.000	Rattus_norvegicus
ENSPEMG00000017353	-	81	97.222	ENSRBIG00000008552	-	53	97.222	Rhinopithecus_bieti
ENSPEMG00000017353	-	81	97.222	ENSRROG00000036885	-	53	97.222	Rhinopithecus_roxellana
ENSPEMG00000017353	-	81	97.222	ENSSBOG00000020342	-	53	97.222	Saimiri_boliviensis_boliviensis
ENSPEMG00000017353	-	81	99.074	ENSSHAG00000011866	-	53	99.074	Sarcophilus_harrisii
ENSPEMG00000017353	-	81	97.222	ENSSSCG00000006564	-	53	97.222	Sus_scrofa
ENSPEMG00000017353	-	86	86.087	ENSTRUG00000024177	rab13	58	86.087	Takifugu_rubripes
ENSPEMG00000017353	-	81	98.148	ENSTBEG00000012734	-	53	98.148	Tupaia_belangeri
ENSPEMG00000017353	-	100	97.222	ENSTTRG00000011183	-	67	97.222	Tursiops_truncatus
ENSPEMG00000017353	-	86	86.957	ENSXCOG00000019533	rab13	61	86.957	Xiphophorus_couchianus