EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSPEMG00000017399 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: polyadenylate-binding protein 1-like 2
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 706 bases
Position: chrKI616900.1:69844-70549
Accession: 102926598
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000018967	RRM_5	PF13893.6	2e-06	1	1
ENSPEMP00000018967	RRM_1	PF00076.22	4e-43	1	2
ENSPEMP00000018967	RRM_1	PF00076.22	4e-43	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000023301	-	624	XM_015990854	ENSPEMP00000018967	207 (aa)	XP_015846340	-

Gene Model

Click here to download ENSPEMG00000017399's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000017399's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000017399	-	73	41.026	ENSPEMG00000007877	Trnau1ap	59	41.026
ENSPEMG00000017399	-	79	33.929	ENSPEMG00000001090	Tia1	87	33.929
ENSPEMG00000017399	-	96	72.308	ENSPEMG00000024193	-	56	78.235
ENSPEMG00000017399	-	95	71.429	ENSPEMG00000011901	Pabpc6	56	77.246
ENSPEMG00000017399	-	96	71.859	ENSPEMG00000023569	-	57	77.647
ENSPEMG00000017399	-	95	58.333	ENSPEMG00000000171	Pabpc5	95	56.931
ENSPEMG00000017399	-	100	100.000	ENSPEMG00000014159	-	100	100.000
ENSPEMG00000017399	-	95	66.860	ENSPEMG00000020671	Pabpc1l	60	66.467
ENSPEMG00000017399	-	96	74.372	ENSPEMG00000014998	Pabpc1	56	71.859
ENSPEMG00000017399	-	85	32.911	ENSPEMG00000022021	Elavl1	95	32.911
ENSPEMG00000017399	-	96	72.222	ENSPEMG00000013149	Pabpc2	57	70.202
ENSPEMG00000017399	-	97	58.000	ENSPEMG00000012565	Pabpc4l	98	56.000
ENSPEMG00000017399	-	80	31.892	ENSPEMG00000014538	Tial1	77	31.892