EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000017607 (Gene tree)
Gene ID: 102917783
Gene Symbol: Rbfox1
Alias: -
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 602704 bases
Position: chrKI615553.1:1884807-2487510
Accession: 102917783
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000019272	Fox-1_C	PF12414.8	1.1e-42	1	1
ENSPEMP00000019276	Fox-1_C	PF12414.8	1.2e-40	1	1
ENSPEMP00000019276	RRM_1	PF00076.22	3e-18	1	1
ENSPEMP00000019272	RRM_1	PF00076.22	3.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000023611	-	1191	XM_016003172	ENSPEMP00000019272	396 (aa)	XP_015858658	UPI000A3127CD
ENSPEMT00000023615	-	1254	XM_006984655	ENSPEMP00000019276	417 (aa)	XP_006984717	UPI00042ABD7D

Gene Model

Click here to download ENSPEMG00000017607's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000017607's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000017607	Rbfox1	91	57.488	ENSPEMG00000010500	Rbfox3	100	61.440
ENSPEMG00000017607	Rbfox1	100	59.951	ENSPEMG00000012542	Rbfox2	100	59.709

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000017607	Rbfox1	100	98.489	ENSG00000078328	RBFOX1	100	98.489	Homo_sapiens
ENSPEMG00000017607	Rbfox1	100	75.422	ENSAPOG00000003197	rbfox1	100	75.904	Acanthochromis_polyacanthus
ENSPEMG00000017607	Rbfox1	60	94.400	ENSAMEG00000008605	RBFOX1	100	94.400	Ailuropoda_melanoleuca
ENSPEMG00000017607	Rbfox1	67	64.527	ENSACIG00000005478	rbfox1	68	64.983	Amphilophus_citrinellus
ENSPEMG00000017607	Rbfox1	73	70.033	ENSAOCG00000008283	rbfox1	98	69.551	Amphiprion_ocellaris
ENSPEMG00000017607	Rbfox1	95	70.899	ENSAPEG00000010636	rbfox1	100	70.789	Amphiprion_percula
ENSPEMG00000017607	Rbfox1	73	68.608	ENSATEG00000007513	rbfox1	97	68.167	Anabas_testudineus
ENSPEMG00000017607	Rbfox1	98	93.830	ENSAPLG00000013263	RBFOX1	97	93.830	Anas_platyrhynchos
ENSPEMG00000017607	Rbfox1	99	86.717	ENSACAG00000004013	RBFOX1	100	86.717	Anolis_carolinensis
ENSPEMG00000017607	Rbfox1	99	94.924	ENSANAG00000029527	RBFOX1	98	97.449	Aotus_nancymaae
ENSPEMG00000017607	Rbfox1	56	87.838	ENSAMXG00000002431	rbfox1	65	87.946	Astyanax_mexicanus
ENSPEMG00000017607	Rbfox1	99	94.670	ENSBTAG00000007210	RBFOX1	98	97.194	Bos_taurus
ENSPEMG00000017607	Rbfox1	100	97.368	ENSCJAG00000017351	RBFOX1	100	97.368	Callithrix_jacchus
ENSPEMG00000017607	Rbfox1	100	97.847	ENSCAFG00000019082	RBFOX1	100	97.847	Canis_familiaris
ENSPEMG00000017607	Rbfox1	71	97.297	ENSCAFG00020024881	RBFOX1	83	97.297	Canis_lupus_dingo
ENSPEMG00000017607	Rbfox1	99	94.670	ENSCHIG00000023549	RBFOX1	98	97.194	Capra_hircus
ENSPEMG00000017607	Rbfox1	98	95.630	ENSTSYG00000005334	RBFOX1	100	97.686	Carlito_syrichta
ENSPEMG00000017607	Rbfox1	100	96.890	ENSCAPG00000017669	RBFOX1	100	97.423	Cavia_aperea
ENSPEMG00000017607	Rbfox1	100	97.481	ENSCPOG00000011314	RBFOX1	100	97.481	Cavia_porcellus
ENSPEMG00000017607	Rbfox1	100	97.368	ENSCCAG00000023031	RBFOX1	100	97.368	Cebus_capucinus
ENSPEMG00000017607	Rbfox1	100	97.847	ENSCATG00000033816	RBFOX1	100	97.847	Cercocebus_atys
ENSPEMG00000017607	Rbfox1	100	97.481	ENSCLAG00000012761	RBFOX1	100	97.481	Chinchilla_lanigera
ENSPEMG00000017607	Rbfox1	84	95.522	ENSCSAG00000008739	RBFOX1	89	95.522	Chlorocebus_sabaeus
ENSPEMG00000017607	Rbfox1	100	75.837	ENSCHOG00000012843	RBFOX1	100	75.837	Choloepus_hoffmanni
ENSPEMG00000017607	Rbfox1	98	94.072	ENSCPBG00000026626	RBFOX1	98	93.367	Chrysemys_picta_bellii
ENSPEMG00000017607	Rbfox1	100	97.847	ENSCANG00000033125	RBFOX1	100	97.847	Colobus_angolensis_palliatus
ENSPEMG00000017607	Rbfox1	100	99.760	ENSCGRG00001013729	Rbfox1	100	99.760	Cricetulus_griseus_chok1gshd
ENSPEMG00000017607	Rbfox1	100	99.760	ENSCGRG00000003272	Rbfox1	100	99.760	Cricetulus_griseus_crigri
ENSPEMG00000017607	Rbfox1	95	71.285	ENSCSEG00000008840	rbfox1	100	71.285	Cynoglossus_semilaevis
ENSPEMG00000017607	Rbfox1	100	80.402	ENSDARG00000014746	rbfox1	100	85.854	Danio_rerio
ENSPEMG00000017607	Rbfox1	98	97.436	ENSDNOG00000043612	RBFOX1	94	97.436	Dasypus_novemcinctus
ENSPEMG00000017607	Rbfox1	100	93.300	ENSDORG00000010024	Rbfox1	100	93.300	Dipodomys_ordii
ENSPEMG00000017607	Rbfox1	100	78.417	ENSETEG00000003771	RBFOX1	100	78.417	Echinops_telfairi
ENSPEMG00000017607	Rbfox1	98	98.201	ENSEASG00005011599	RBFOX1	98	97.959	Equus_asinus_asinus
ENSPEMG00000017607	Rbfox1	97	97.531	ENSECAG00000012667	RBFOX1	98	97.531	Equus_caballus
ENSPEMG00000017607	Rbfox1	84	66.390	ENSELUG00000013096	rbfox1	100	52.393	Esox_lucius
ENSPEMG00000017607	Rbfox1	98	97.943	ENSFCAG00000025322	RBFOX1	89	97.943	Felis_catus
ENSPEMG00000017607	Rbfox1	83	91.592	ENSFALG00000004027	RBFOX1	100	91.592	Ficedula_albicollis
ENSPEMG00000017607	Rbfox1	100	97.985	ENSFDAG00000007388	RBFOX1	100	97.985	Fukomys_damarensis
ENSPEMG00000017607	Rbfox1	100	92.584	ENSGALG00000034325	RBFOX1	100	92.584	Gallus_gallus
ENSPEMG00000017607	Rbfox1	100	91.866	ENSGAGG00000023681	RBFOX1	100	94.164	Gopherus_agassizii
ENSPEMG00000017607	Rbfox1	100	97.847	ENSGGOG00000016871	-	100	97.847	Gorilla_gorilla
ENSPEMG00000017607	Rbfox1	100	97.733	ENSHGLG00000016944	RBFOX1	100	97.733	Heterocephalus_glaber_female
ENSPEMG00000017607	Rbfox1	100	97.733	ENSHGLG00100003272	RBFOX1	100	97.733	Heterocephalus_glaber_male
ENSPEMG00000017607	Rbfox1	85	70.893	ENSHCOG00000016419	rbfox1	91	70.977	Hippocampus_comes
ENSPEMG00000017607	Rbfox1	95	83.245	ENSIPUG00000015215	rbfox1	100	83.245	Ictalurus_punctatus
ENSPEMG00000017607	Rbfox1	100	97.229	ENSSTOG00000000322	RBFOX1	100	97.229	Ictidomys_tridecemlineatus
ENSPEMG00000017607	Rbfox1	100	94.724	ENSJJAG00000002575	Rbfox1	100	94.724	Jaculus_jaculus
ENSPEMG00000017607	Rbfox1	99	72.705	ENSLBEG00000014659	rbfox1	99	72.457	Labrus_bergylta
ENSPEMG00000017607	Rbfox1	98	86.260	ENSLOCG00000006675	rbfox1	99	86.260	Lepisosteus_oculatus
ENSPEMG00000017607	Rbfox1	78	98.701	ENSLAFG00000011480	RBFOX1	100	99.026	Loxodonta_africana
ENSPEMG00000017607	Rbfox1	100	97.608	ENSMFAG00000036447	RBFOX1	100	97.608	Macaca_fascicularis
ENSPEMG00000017607	Rbfox1	100	97.608	ENSMMUG00000003458	RBFOX1	100	97.608	Macaca_mulatta
ENSPEMG00000017607	Rbfox1	100	97.608	ENSMNEG00000032034	RBFOX1	100	97.608	Macaca_nemestrina
ENSPEMG00000017607	Rbfox1	100	97.847	ENSMLEG00000015382	RBFOX1	100	97.847	Mandrillus_leucophaeus
ENSPEMG00000017607	Rbfox1	95	74.490	ENSMAMG00000003142	rbfox1	100	75.000	Mastacembelus_armatus
ENSPEMG00000017607	Rbfox1	71	88.256	ENSMGAG00000008606	RBFOX1	96	87.770	Meleagris_gallopavo
ENSPEMG00000017607	Rbfox1	99	58.481	ENSMAUG00000020570	Rbfox1	99	57.722	Mesocricetus_auratus
ENSPEMG00000017607	Rbfox1	98	90.513	ENSMICG00000034286	RBFOX1	100	88.834	Microcebus_murinus
ENSPEMG00000017607	Rbfox1	100	99.760	ENSMOCG00000020932	Rbfox1	100	99.760	Microtus_ochrogaster
ENSPEMG00000017607	Rbfox1	86	70.435	ENSMMOG00000009716	rbfox1	86	70.796	Mola_mola
ENSPEMG00000017607	Rbfox1	80	94.671	ENSMODG00000005826	RBFOX1	90	94.671	Monodelphis_domestica
ENSPEMG00000017607	Rbfox1	100	75.550	ENSMALG00000003337	rbfox1	100	75.550	Monopterus_albus
ENSPEMG00000017607	Rbfox1	100	100.000	MGP_CAROLIEiJ_G0020427	Rbfox1	100	100.000	Mus_caroli
ENSPEMG00000017607	Rbfox1	100	99.760	ENSMUSG00000008658	Rbfox1	100	100.000	Mus_musculus
ENSPEMG00000017607	Rbfox1	100	100.000	MGP_PahariEiJ_G0016135	Rbfox1	100	100.000	Mus_pahari
ENSPEMG00000017607	Rbfox1	100	99.520	MGP_SPRETEiJ_G0021321	Rbfox1	100	99.520	Mus_spretus
ENSPEMG00000017607	Rbfox1	84	95.783	ENSMPUG00000014822	RBFOX1	91	93.611	Mustela_putorius_furo
ENSPEMG00000017607	Rbfox1	78	99.349	ENSMLUG00000015896	RBFOX1	100	99.349	Myotis_lucifugus
ENSPEMG00000017607	Rbfox1	100	98.565	ENSNGAG00000023276	Rbfox1	100	98.565	Nannospalax_galili
ENSPEMG00000017607	Rbfox1	98	60.482	ENSNBRG00000011084	rbfox1	98	59.302	Neolamprologus_brichardi
ENSPEMG00000017607	Rbfox1	100	97.608	ENSNLEG00000010017	-	100	97.608	Nomascus_leucogenys
ENSPEMG00000017607	Rbfox1	100	80.144	ENSMEUG00000012525	RBFOX1	100	80.144	Notamacropus_eugenii
ENSPEMG00000017607	Rbfox1	100	79.426	ENSOPRG00000006199	-	100	78.230	Ochotona_princeps
ENSPEMG00000017607	Rbfox1	100	96.977	ENSODEG00000013166	RBFOX1	100	96.977	Octodon_degus
ENSPEMG00000017607	Rbfox1	84	92.537	ENSOANG00000002379	RBFOX1	89	92.537	Ornithorhynchus_anatinus
ENSPEMG00000017607	Rbfox1	57	92.889	ENSOCUG00000001205	-	100	92.889	Oryctolagus_cuniculus
ENSPEMG00000017607	Rbfox1	100	96.474	ENSOGAG00000025535	RBFOX1	100	96.474	Otolemur_garnettii
ENSPEMG00000017607	Rbfox1	63	84.337	ENSOARG00000005135	RBFOX1	100	83.600	Ovis_aries
ENSPEMG00000017607	Rbfox1	98	98.454	ENSPPAG00000036238	-	100	98.454	Pan_paniscus
ENSPEMG00000017607	Rbfox1	100	97.608	ENSPPRG00000006546	RBFOX1	100	97.608	Panthera_pardus
ENSPEMG00000017607	Rbfox1	100	85.642	ENSPTIG00000021154	RBFOX1	99	85.861	Panthera_tigris_altaica
ENSPEMG00000017607	Rbfox1	100	97.847	ENSPTRG00000007744	RBFOX1	100	97.847	Pan_troglodytes
ENSPEMG00000017607	Rbfox1	100	97.847	ENSPANG00000026500	RBFOX1	100	97.847	Papio_anubis
ENSPEMG00000017607	Rbfox1	73	83.103	ENSPKIG00000019353	rbfox1	86	82.877	Paramormyrops_kingsleyae
ENSPEMG00000017607	Rbfox1	100	81.454	ENSPKIG00000009667	-	95	82.880	Paramormyrops_kingsleyae
ENSPEMG00000017607	Rbfox1	99	93.130	ENSPSIG00000006523	RBFOX1	98	93.130	Pelodiscus_sinensis
ENSPEMG00000017607	Rbfox1	73	92.414	ENSPCIG00000026887	RBFOX1	100	92.414	Phascolarctos_cinereus
ENSPEMG00000017607	Rbfox1	84	96.084	ENSPPYG00000007079	-	91	93.889	Pongo_abelii
ENSPEMG00000017607	Rbfox1	90	89.418	ENSPCAG00000002630	RBFOX1	100	89.418	Procavia_capensis
ENSPEMG00000017607	Rbfox1	100	97.368	ENSPCOG00000025687	RBFOX1	100	97.368	Propithecus_coquereli
ENSPEMG00000017607	Rbfox1	100	93.301	ENSPVAG00000013467	RBFOX1	100	93.301	Pteropus_vampyrus
ENSPEMG00000017607	Rbfox1	95	81.313	ENSPNAG00000023109	rbfox1	100	81.313	Pygocentrus_nattereri
ENSPEMG00000017607	Rbfox1	100	97.362	ENSRNOG00000002827	Rbfox1	100	97.362	Rattus_norvegicus
ENSPEMG00000017607	Rbfox1	98	98.454	ENSRBIG00000044478	RBFOX1	100	98.454	Rhinopithecus_bieti
ENSPEMG00000017607	Rbfox1	100	97.847	ENSRROG00000044411	RBFOX1	100	97.847	Rhinopithecus_roxellana
ENSPEMG00000017607	Rbfox1	99	96.947	ENSSBOG00000033726	RBFOX1	98	96.947	Saimiri_boliviensis_boliviensis
ENSPEMG00000017607	Rbfox1	100	92.191	ENSSHAG00000009257	RBFOX1	100	92.191	Sarcophilus_harrisii
ENSPEMG00000017607	Rbfox1	98	67.939	ENSSFOG00015023675	rbfox1	93	87.778	Scleropages_formosus
ENSPEMG00000017607	Rbfox1	88	70.225	ENSSFOG00015009955	-	87	67.819	Scleropages_formosus
ENSPEMG00000017607	Rbfox1	98	76.355	ENSSMAG00000015505	rbfox1	96	72.577	Scophthalmus_maximus
ENSPEMG00000017607	Rbfox1	98	73.980	ENSSDUG00000016413	rbfox1	99	73.724	Seriola_dumerili
ENSPEMG00000017607	Rbfox1	85	71.765	ENSSLDG00000009353	rbfox1	97	71.429	Seriola_lalandi_dorsalis
ENSPEMG00000017607	Rbfox1	85	82.647	ENSSPUG00000009732	RBFOX1	87	82.698	Sphenodon_punctatus
ENSPEMG00000017607	Rbfox1	98	75.616	ENSSPAG00000009723	rbfox1	100	75.369	Stegastes_partitus
ENSPEMG00000017607	Rbfox1	97	97.037	ENSSSCG00000007917	RBFOX1	98	97.037	Sus_scrofa
ENSPEMG00000017607	Rbfox1	98	93.830	ENSTGUG00000004562	RBFOX1	100	93.830	Taeniopygia_guttata
ENSPEMG00000017607	Rbfox1	98	75.123	ENSTRUG00000020940	rbfox1	99	75.123	Takifugu_rubripes
ENSPEMG00000017607	Rbfox1	67	57.006	ENSTNIG00000002567	rbfox1	100	58.599	Tetraodon_nigroviridis
ENSPEMG00000017607	Rbfox1	81	86.207	ENSTBEG00000009169	-	81	86.207	Tupaia_belangeri
ENSPEMG00000017607	Rbfox1	100	97.129	ENSTTRG00000005700	RBFOX1	100	97.129	Tursiops_truncatus
ENSPEMG00000017607	Rbfox1	100	91.688	ENSUAMG00000024633	RBFOX1	100	91.688	Ursus_americanus
ENSPEMG00000017607	Rbfox1	100	82.872	ENSUMAG00000003579	RBFOX1	100	82.872	Ursus_maritimus
ENSPEMG00000017607	Rbfox1	81	99.026	ENSVPAG00000001284	RBFOX1	81	99.026	Vicugna_pacos
ENSPEMG00000017607	Rbfox1	98	97.943	ENSVVUG00000017311	RBFOX1	96	91.148	Vulpes_vulpes