EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPEMG00000017668 (Gene tree)
Gene ID
-
Gene Symbol
Cpsf3
Alias
-
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Peromyscus_maniculatus_bairdii
Status
putative
Strand
Minus strand
Length
42077 bases
Position
chrKI615395.1:6094488-6136564
Accession
102904101
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPEMP00000019362CPSF73-100_CPF11718.88.5e-5511
ENSPEMP00000019362Beta-CaspPF10996.83.1e-3311
ENSPEMP00000019362Lactamase_BPF00753.271.1e-1811
ENSPEMP00000019362RMMBLPF07521.121.6e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPEMT00000023702-2055XM_006976619ENSPEMP00000019362684 (aa)XP_006976681UPI00042AD4AF
Gene Model
Click here to download ENSPEMG00000017668's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000017668's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPEMG00000017668Cpsf36539.780ENSPEMG00000018526Ints117439.780
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPEMG00000017668Cpsf310098.538ENSG00000119203CPSF3100100.000Homo_sapiens
ENSPEMG00000017668Cpsf37396.593ENSAPOG00000012241CPSF39096.579Acanthochromis_polyacanthus
ENSPEMG00000017668Cpsf39985.272ENSAPOG00000022087cpsf39885.125Acanthochromis_polyacanthus
ENSPEMG00000017668Cpsf310098.538ENSAMEG00000008493CPSF310098.538Ailuropoda_melanoleuca
ENSPEMG00000017668Cpsf39282.643ENSACIG00000009846cpsf39982.484Amphilophus_citrinellus
ENSPEMG00000017668Cpsf39286.667ENSACIG00000023663CPSF39986.667Amphilophus_citrinellus
ENSPEMG00000017668Cpsf39988.235ENSAOCG00000010077CPSF39888.235Amphiprion_ocellaris
ENSPEMG00000017668Cpsf39985.272ENSAOCG00000022056cpsf39490.986Amphiprion_ocellaris
ENSPEMG00000017668Cpsf39988.235ENSAPEG00000021167CPSF39888.235Amphiprion_percula
ENSPEMG00000017668Cpsf39985.420ENSAPEG00000019526cpsf39786.574Amphiprion_percula
ENSPEMG00000017668Cpsf39985.420ENSATEG00000003959cpsf39885.272Anabas_testudineus
ENSPEMG00000017668Cpsf39983.529ENSATEG00000014525CPSF39883.529Anabas_testudineus
ENSPEMG00000017668Cpsf39894.494ENSAPLG00000006941CPSF39894.494Anas_platyrhynchos
ENSPEMG00000017668Cpsf39392.126ENSACAG00000001759CPSF39991.811Anolis_carolinensis
ENSPEMG00000017668Cpsf310091.667ENSANAG00000031254CPSF310091.667Aotus_nancymaae
ENSPEMG00000017668Cpsf39785.564ENSACLG00000014484cpsf39985.414Astatotilapia_calliptera
ENSPEMG00000017668Cpsf39286.508ENSACLG00000018846CPSF39986.508Astatotilapia_calliptera
ENSPEMG00000017668Cpsf39987.500ENSAMXG00000004786cpsf39887.500Astyanax_mexicanus
ENSPEMG00000017668Cpsf310098.392ENSBTAG00000019735CPSF310098.392Bos_taurus
ENSPEMG00000017668Cpsf39159.055WBGene00013460cpsf-38959.055Caenorhabditis_elegans
ENSPEMG00000017668Cpsf310098.246ENSCJAG00000006276CPSF310098.246Callithrix_jacchus
ENSPEMG00000017668Cpsf310098.538ENSCAFG00000003375CPSF39598.538Canis_familiaris
ENSPEMG00000017668Cpsf39098.869ENSCAFG00020026799CPSF310098.869Canis_lupus_dingo
ENSPEMG00000017668Cpsf310098.392ENSCHIG00000013973CPSF310098.392Capra_hircus
ENSPEMG00000017668Cpsf310098.246ENSTSYG00000002967CPSF310098.246Carlito_syrichta
ENSPEMG00000017668Cpsf39897.001ENSCAPG00000013851CPSF310097.001Cavia_aperea
ENSPEMG00000017668Cpsf310097.076ENSCPOG00000011299CPSF310097.076Cavia_porcellus
ENSPEMG00000017668Cpsf310098.099ENSCCAG00000036730CPSF310098.099Cebus_capucinus
ENSPEMG00000017668Cpsf310095.620ENSCATG00000014770CPSF39998.967Cercocebus_atys
ENSPEMG00000017668Cpsf310096.930ENSCLAG00000002727CPSF310096.930Chinchilla_lanigera
ENSPEMG00000017668Cpsf310090.789ENSCSAG00000007125CPSF310090.789Chlorocebus_sabaeus
ENSPEMG00000017668Cpsf386100.000ENSCHOG00000000180CPSF38570.877Choloepus_hoffmanni
ENSPEMG00000017668Cpsf39994.868ENSCPBG00000014074CPSF39994.868Chrysemys_picta_bellii
ENSPEMG00000017668Cpsf39967.737ENSCING00000007214-9867.591Ciona_intestinalis
ENSPEMG00000017668Cpsf310085.234ENSCANG00000034435CPSF310085.234Colobus_angolensis_palliatus
ENSPEMG00000017668Cpsf310098.830ENSCGRG00001013134Cpsf310098.830Cricetulus_griseus_chok1gshd
ENSPEMG00000017668Cpsf310098.830ENSCGRG00000018319Cpsf310098.830Cricetulus_griseus_crigri
ENSPEMG00000017668Cpsf39987.078ENSCSEG00000002021CPSF39986.553Cynoglossus_semilaevis
ENSPEMG00000017668Cpsf39988.676ENSCVAG00000015067CPSF39888.676Cyprinodon_variegatus
ENSPEMG00000017668Cpsf39988.971ENSDARG00000027649cpsf39888.971Danio_rerio
ENSPEMG00000017668Cpsf310096.496ENSDNOG00000008940CPSF39596.496Dasypus_novemcinctus
ENSPEMG00000017668Cpsf39598.003ENSDORG00000014263Cpsf310098.003Dipodomys_ordii
ENSPEMG00000017668Cpsf39967.305FBgn0261065Cpsf739867.158Drosophila_melanogaster
ENSPEMG00000017668Cpsf39585.100ENSETEG00000003893CPSF310085.100Echinops_telfairi
ENSPEMG00000017668Cpsf39978.223ENSEBUG00000009018cpsf39877.937Eptatretus_burgeri
ENSPEMG00000017668Cpsf310098.538ENSEASG00005003970CPSF310098.538Equus_asinus_asinus
ENSPEMG00000017668Cpsf310098.538ENSECAG00000019911CPSF310098.538Equus_caballus
ENSPEMG00000017668Cpsf310083.187ENSEEUG00000015422CPSF310083.187Erinaceus_europaeus
ENSPEMG00000017668Cpsf39988.088ENSELUG00000013775cpsf39888.088Esox_lucius
ENSPEMG00000017668Cpsf310098.392ENSFCAG00000007852CPSF310098.392Felis_catus
ENSPEMG00000017668Cpsf39594.900ENSFALG00000006572CPSF310094.900Ficedula_albicollis
ENSPEMG00000017668Cpsf39996.334ENSFDAG00000006317CPSF39996.334Fukomys_damarensis
ENSPEMG00000017668Cpsf39984.978ENSFHEG00000014774cpsf39884.831Fundulus_heteroclitus
ENSPEMG00000017668Cpsf35969.268ENSFHEG00000012186CPSF39969.268Fundulus_heteroclitus
ENSPEMG00000017668Cpsf39986.471ENSGMOG00000003157cpsf39886.176Gadus_morhua
ENSPEMG00000017668Cpsf39994.126ENSGALG00000016424CPSF39994.126Gallus_gallus
ENSPEMG00000017668Cpsf39282.671ENSGAFG00000019449cpsf39982.512Gambusia_affinis
ENSPEMG00000017668Cpsf39988.660ENSGAFG00000008016CPSF39888.660Gambusia_affinis
ENSPEMG00000017668Cpsf36892.505ENSGAGG00000025583CPSF39392.505Gopherus_agassizii
ENSPEMG00000017668Cpsf310095.994ENSGGOG00000001757CPSF310098.268Gorilla_gorilla
ENSPEMG00000017668Cpsf35981.481ENSHBUG00000014332CPSF39981.481Haplochromis_burtoni
ENSPEMG00000017668Cpsf39985.463ENSHBUG00000001188cpsf39985.316Haplochromis_burtoni
ENSPEMG00000017668Cpsf310096.491ENSHGLG00000000666CPSF39996.491Heterocephalus_glaber_female
ENSPEMG00000017668Cpsf310096.491ENSHGLG00100007765CPSF39996.491Heterocephalus_glaber_male
ENSPEMG00000017668Cpsf39984.604ENSHCOG00000007251cpsf39984.457Hippocampus_comes
ENSPEMG00000017668Cpsf39986.324ENSHCOG00000015957CPSF39786.324Hippocampus_comes
ENSPEMG00000017668Cpsf39986.618ENSIPUG00000023488cpsf39886.618Ictalurus_punctatus
ENSPEMG00000017668Cpsf310097.953ENSSTOG00000004476CPSF310097.953Ictidomys_tridecemlineatus
ENSPEMG00000017668Cpsf310097.661ENSJJAG00000023415Cpsf310097.661Jaculus_jaculus
ENSPEMG00000017668Cpsf39987.941ENSKMAG00000007317CPSF39887.941Kryptolebias_marmoratus
ENSPEMG00000017668Cpsf39984.683ENSKMAG00000002806cpsf39884.536Kryptolebias_marmoratus
ENSPEMG00000017668Cpsf39979.736ENSLBEG00000020569cpsf39478.645Labrus_bergylta
ENSPEMG00000017668Cpsf35579.625ENSLBEG00000015018-9979.625Labrus_bergylta
ENSPEMG00000017668Cpsf39589.198ENSLBEG00000013492CPSF39889.198Labrus_bergylta
ENSPEMG00000017668Cpsf39984.094ENSLACG00000008308CPSF39884.094Latimeria_chalumnae
ENSPEMG00000017668Cpsf39989.721ENSLOCG00000016823cpsf39889.721Lepisosteus_oculatus
ENSPEMG00000017668Cpsf39996.471ENSLAFG00000009467CPSF310096.471Loxodonta_africana
ENSPEMG00000017668Cpsf310098.246ENSMFAG00000001339CPSF310098.246Macaca_fascicularis
ENSPEMG00000017668Cpsf39598.145ENSMMUG00000018038CPSF310098.145Macaca_mulatta
ENSPEMG00000017668Cpsf310085.526ENSMNEG00000039447CPSF310085.526Macaca_nemestrina
ENSPEMG00000017668Cpsf310098.392ENSMLEG00000026825CPSF310098.392Mandrillus_leucophaeus
ENSPEMG00000017668Cpsf39985.862ENSMAMG00000003076cpsf39885.714Mastacembelus_armatus
ENSPEMG00000017668Cpsf39285.601ENSMAMG00000008835CPSF39985.601Mastacembelus_armatus
ENSPEMG00000017668Cpsf39985.463ENSMZEG00005014358cpsf39985.316Maylandia_zebra
ENSPEMG00000017668Cpsf39988.676ENSMZEG00005006258CPSF39888.676Maylandia_zebra
ENSPEMG00000017668Cpsf39894.153ENSMGAG00000013995CPSF310094.153Meleagris_gallopavo
ENSPEMG00000017668Cpsf35597.074ENSMAUG00000000166Cpsf310097.074Mesocricetus_auratus
ENSPEMG00000017668Cpsf310092.836ENSMICG00000002363CPSF310092.836Microcebus_murinus
ENSPEMG00000017668Cpsf310094.006ENSMOCG00000020067Cpsf310094.006Microtus_ochrogaster
ENSPEMG00000017668Cpsf38071.779ENSMMOG00000011923CPSF38477.857Mola_mola
ENSPEMG00000017668Cpsf39482.016ENSMMOG00000018212CPSF39881.860Mola_mola
ENSPEMG00000017668Cpsf310095.514ENSMODG00000014703CPSF310095.514Monodelphis_domestica
ENSPEMG00000017668Cpsf39383.281ENSMALG00000011474CPSF39983.438Monopterus_albus
ENSPEMG00000017668Cpsf39986.050ENSMALG00000016416cpsf39985.903Monopterus_albus
ENSPEMG00000017668Cpsf310098.684MGP_CAROLIEiJ_G0017640Cpsf310098.684Mus_caroli
ENSPEMG00000017668Cpsf310098.684ENSMUSG00000054309Cpsf310098.684Mus_musculus
ENSPEMG00000017668Cpsf310098.538MGP_PahariEiJ_G0029397Cpsf310098.538Mus_pahari
ENSPEMG00000017668Cpsf310098.684MGP_SPRETEiJ_G0018481Cpsf310098.684Mus_spretus
ENSPEMG00000017668Cpsf310098.099ENSMPUG00000013213CPSF310098.099Mustela_putorius_furo
ENSPEMG00000017668Cpsf310097.518ENSMLUG00000010636CPSF310097.518Myotis_lucifugus
ENSPEMG00000017668Cpsf310098.684ENSNGAG00000019836Cpsf310098.684Nannospalax_galili
ENSPEMG00000017668Cpsf39985.022ENSNBRG00000004770cpsf39984.875Neolamprologus_brichardi
ENSPEMG00000017668Cpsf39286.508ENSNBRG00000010525CPSF39986.508Neolamprologus_brichardi
ENSPEMG00000017668Cpsf310098.246ENSNLEG00000013359CPSF310098.246Nomascus_leucogenys
ENSPEMG00000017668Cpsf310065.058ENSMEUG00000013117-10065.058Notamacropus_eugenii
ENSPEMG00000017668Cpsf310088.889ENSOPRG00000008902CPSF310088.889Ochotona_princeps
ENSPEMG00000017668Cpsf310096.637ENSODEG00000003129CPSF310096.637Octodon_degus
ENSPEMG00000017668Cpsf39985.609ENSONIG00000018812cpsf39985.463Oreochromis_niloticus
ENSPEMG00000017668Cpsf38295.390ENSOANG00000008577CPSF310095.390Ornithorhynchus_anatinus
ENSPEMG00000017668Cpsf310097.953ENSOCUG00000003728CPSF310097.953Oryctolagus_cuniculus
ENSPEMG00000017668Cpsf39983.407ENSORLG00000018854cpsf39983.260Oryzias_latipes
ENSPEMG00000017668Cpsf39983.260ENSORLG00020013331cpsf39983.113Oryzias_latipes_hni
ENSPEMG00000017668Cpsf39983.407ENSORLG00015011017cpsf39983.260Oryzias_latipes_hsok
ENSPEMG00000017668Cpsf39983.554ENSOMEG00000010647cpsf39483.407Oryzias_melastigma
ENSPEMG00000017668Cpsf310088.304ENSOGAG00000001680CPSF310088.304Otolemur_garnettii
ENSPEMG00000017668Cpsf310098.392ENSOARG00000015073CPSF310098.392Ovis_aries
ENSPEMG00000017668Cpsf310098.392ENSPPAG00000042457CPSF310098.392Pan_paniscus
ENSPEMG00000017668Cpsf310098.392ENSPPRG00000016790CPSF310098.392Panthera_pardus
ENSPEMG00000017668Cpsf39998.382ENSPTIG00000003920CPSF310098.268Panthera_tigris_altaica
ENSPEMG00000017668Cpsf310098.392ENSPTRG00000011638CPSF310098.392Pan_troglodytes
ENSPEMG00000017668Cpsf310098.099ENSPANG00000016798CPSF310098.099Papio_anubis
ENSPEMG00000017668Cpsf39989.412ENSPKIG00000023646cpsf39989.147Paramormyrops_kingsleyae
ENSPEMG00000017668Cpsf39993.704ENSPSIG00000016144CPSF310093.704Pelodiscus_sinensis
ENSPEMG00000017668Cpsf38385.166ENSPMGG00000006141-9587.319Periophthalmus_magnuspinnatus
ENSPEMG00000017668Cpsf35979.506ENSPMGG00000015311CPSF39979.506Periophthalmus_magnuspinnatus
ENSPEMG00000017668Cpsf37890.130ENSPMAG00000004841cpsf39990.130Petromyzon_marinus
ENSPEMG00000017668Cpsf39897.301ENSPCIG00000009823CPSF39897.393Phascolarctos_cinereus
ENSPEMG00000017668Cpsf39984.604ENSPFOG00000015922cpsf39984.457Poecilia_formosa
ENSPEMG00000017668Cpsf39988.365ENSPFOG00000010418-9888.365Poecilia_formosa
ENSPEMG00000017668Cpsf39984.604ENSPLAG00000000882cpsf39984.457Poecilia_latipinna
ENSPEMG00000017668Cpsf35981.683ENSPLAG00000021300-9981.683Poecilia_latipinna
ENSPEMG00000017668Cpsf39984.751ENSPMEG00000018309cpsf39984.604Poecilia_mexicana
ENSPEMG00000017668Cpsf39983.063ENSPREG00000004482CPSF39883.063Poecilia_reticulata
ENSPEMG00000017668Cpsf39282.512ENSPREG00000014875cpsf39982.353Poecilia_reticulata
ENSPEMG00000017668Cpsf310093.860ENSPPYG00000012666CPSF310093.860Pongo_abelii
ENSPEMG00000017668Cpsf39562.826ENSPCAG00000015042CPSF310062.826Procavia_capensis
ENSPEMG00000017668Cpsf38892.199ENSPCOG00000023016CPSF39892.199Propithecus_coquereli
ENSPEMG00000017668Cpsf39998.387ENSPVAG00000005324CPSF39998.387Pteropus_vampyrus
ENSPEMG00000017668Cpsf39985.463ENSPNYG00000004405cpsf39985.316Pundamilia_nyererei
ENSPEMG00000017668Cpsf37991.344ENSPNYG00000021047CPSF39191.344Pundamilia_nyererei
ENSPEMG00000017668Cpsf39986.912ENSPNAG00000023060cpsf39886.912Pygocentrus_nattereri
ENSPEMG00000017668Cpsf39998.680ENSRNOG00000052418Cpsf39998.680Rattus_norvegicus
ENSPEMG00000017668Cpsf310092.398ENSRBIG00000041615CPSF39993.663Rhinopithecus_bieti
ENSPEMG00000017668Cpsf310098.392ENSRROG00000033792CPSF310098.392Rhinopithecus_roxellana
ENSPEMG00000017668Cpsf39340.403YLR277CYSH18443.227Saccharomyces_cerevisiae
ENSPEMG00000017668Cpsf310092.029ENSSBOG00000027263CPSF310092.029Saimiri_boliviensis_boliviensis
ENSPEMG00000017668Cpsf310097.222ENSSHAG00000007024CPSF310097.222Sarcophilus_harrisii
ENSPEMG00000017668Cpsf39989.134ENSSFOG00015002108cpsf39989.134Scleropages_formosus
ENSPEMG00000017668Cpsf39587.654ENSSMAG00000020534CPSF39587.654Scophthalmus_maximus
ENSPEMG00000017668Cpsf39985.609ENSSDUG00000002828cpsf39685.463Seriola_dumerili
ENSPEMG00000017668Cpsf39988.382ENSSDUG00000018498CPSF39888.382Seriola_dumerili
ENSPEMG00000017668Cpsf39988.382ENSSLDG00000005234CPSF39888.382Seriola_lalandi_dorsalis
ENSPEMG00000017668Cpsf39985.609ENSSLDG00000008469cpsf39190.678Seriola_lalandi_dorsalis
ENSPEMG00000017668Cpsf310080.263ENSSARG00000005186CPSF310080.263Sorex_araneus
ENSPEMG00000017668Cpsf39892.399ENSSPUG00000015525CPSF39792.399Sphenodon_punctatus
ENSPEMG00000017668Cpsf39988.088ENSSPAG00000002906CPSF39888.088Stegastes_partitus
ENSPEMG00000017668Cpsf39985.420ENSSPAG00000018579cpsf39885.272Stegastes_partitus
ENSPEMG00000017668Cpsf39998.536ENSSSCG00000020799CPSF39998.536Sus_scrofa
ENSPEMG00000017668Cpsf39995.007ENSTGUG00000013016CPSF39995.007Taeniopygia_guttata
ENSPEMG00000017668Cpsf35972.727ENSTRUG00000013905CPSF39972.346Takifugu_rubripes
ENSPEMG00000017668Cpsf39984.853ENSTRUG00000007030cpsf39784.853Takifugu_rubripes
ENSPEMG00000017668Cpsf38593.151ENSTBEG00000002707CPSF38593.151Tupaia_belangeri
ENSPEMG00000017668Cpsf38895.161ENSTTRG00000000861CPSF38895.161Tursiops_truncatus
ENSPEMG00000017668Cpsf39995.601ENSUAMG00000007535CPSF39895.601Ursus_americanus
ENSPEMG00000017668Cpsf39598.454ENSUMAG00000003676CPSF310098.454Ursus_maritimus
ENSPEMG00000017668Cpsf39394.795ENSVPAG00000008041CPSF310094.795Vicugna_pacos
ENSPEMG00000017668Cpsf310098.538ENSVVUG00000002194CPSF310098.538Vulpes_vulpes
ENSPEMG00000017668Cpsf39989.868ENSXETG00000008263cpsf39889.868Xenopus_tropicalis
ENSPEMG00000017668Cpsf39984.897ENSXCOG00000019695cpsf39984.751Xiphophorus_couchianus
ENSPEMG00000017668Cpsf35480.323ENSXCOG00000000957-8780.323Xiphophorus_couchianus
ENSPEMG00000017668Cpsf39988.513ENSXMAG00000027291CPSF39888.513Xiphophorus_maculatus
ENSPEMG00000017668Cpsf39984.604ENSXMAG00000009784cpsf39984.457Xiphophorus_maculatus

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