EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000017769 (Gene tree)
Gene ID: -
Gene Symbol: Rbm12
Alias: -
Full Name: copine 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 3039 bases
Position: chrKI615677.1:1192975-1196013
Accession: 102920140
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000019489	RRM_1	PF00076.22	2.4e-29	1	3
ENSPEMP00000019489	RRM_1	PF00076.22	2.4e-29	2	3
ENSPEMP00000019489	RRM_1	PF00076.22	2.4e-29	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000023830	-	3009	XM_006988267	ENSPEMP00000019489	1002 (aa)	XP_006988329	-

Gene Model

Click here to download ENSPEMG00000017769's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000017769's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000017769	Rbm12	54	71.264	ENSPEMG00000008279	-	67	71.264

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000017769	Rbm12	100	81.845	ENSG00000244462	RBM12	100	98.601	Homo_sapiens
ENSPEMG00000017769	Rbm12	100	85.359	ENSAMEG00000019189	RBM12	100	80.139	Ailuropoda_melanoleuca
ENSPEMG00000017769	Rbm12	89	81.860	ENSACAG00000006330	RBM12	81	75.951	Anolis_carolinensis
ENSPEMG00000017769	Rbm12	100	81.132	ENSANAG00000032596	RBM12	98	79.584	Aotus_nancymaae
ENSPEMG00000017769	Rbm12	100	87.649	ENSBTAG00000044015	RBM12	100	88.048	Bos_taurus
ENSPEMG00000017769	Rbm12	89	97.090	ENSCAFG00000008256	RBM12	98	97.090	Canis_familiaris
ENSPEMG00000017769	Rbm12	88	96.813	ENSCAFG00020005650	RBM12	100	80.578	Canis_lupus_dingo
ENSPEMG00000017769	Rbm12	100	84.562	ENSCHIG00000024592	RBM12	100	78.947	Capra_hircus
ENSPEMG00000017769	Rbm12	94	95.118	ENSTSYG00000030563	RBM12	73	95.118	Carlito_syrichta
ENSPEMG00000017769	Rbm12	86	89.382	ENSCAPG00000006176	RBM12	96	89.474	Cavia_aperea
ENSPEMG00000017769	Rbm12	100	89.187	ENSCPOG00000035170	RBM12	100	89.484	Cavia_porcellus
ENSPEMG00000017769	Rbm12	87	89.894	ENSCCAG00000035899	-	100	90.164	Cebus_capucinus
ENSPEMG00000017769	Rbm12	96	79.751	ENSCCAG00000036056	-	98	77.490	Cebus_capucinus
ENSPEMG00000017769	Rbm12	100	81.548	ENSCATG00000030934	RBM12	98	79.761	Cercocebus_atys
ENSPEMG00000017769	Rbm12	100	93.371	ENSCLAG00000017230	RBM12	100	89.920	Chinchilla_lanigera
ENSPEMG00000017769	Rbm12	100	85.119	ENSCANG00000030552	RBM12	98	79.860	Colobus_angolensis_palliatus
ENSPEMG00000017769	Rbm12	100	96.108	ENSCGRG00001021144	Rbm12	100	96.108	Cricetulus_griseus_chok1gshd
ENSPEMG00000017769	Rbm12	100	96.108	ENSCGRG00000012719	Rbm12	100	96.108	Cricetulus_griseus_crigri
ENSPEMG00000017769	Rbm12	100	88.955	ENSDORG00000028509	-	100	89.641	Dipodomys_ordii
ENSPEMG00000017769	Rbm12	100	83.450	ENSDORG00000000606	-	100	83.333	Dipodomys_ordii
ENSPEMG00000017769	Rbm12	100	86.056	ENSECAG00000021997	RBM12	76	94.722	Equus_caballus
ENSPEMG00000017769	Rbm12	59	95.699	ENSEEUG00000008858	-	56	95.699	Erinaceus_europaeus
ENSPEMG00000017769	Rbm12	100	93.866	ENSFDAG00000014663	RBM12	100	79.661	Fukomys_damarensis
ENSPEMG00000017769	Rbm12	89	85.253	ENSGALG00000030253	RBM12	100	79.945	Gallus_gallus
ENSPEMG00000017769	Rbm12	100	81.647	ENSGGOG00000028500	RBM12	98	79.860	Gorilla_gorilla
ENSPEMG00000017769	Rbm12	100	94.437	ENSHGLG00000013208	RBM12	100	89.542	Heterocephalus_glaber_female
ENSPEMG00000017769	Rbm12	83	96.708	ENSHGLG00100019158	RBM12	90	96.708	Heterocephalus_glaber_male
ENSPEMG00000017769	Rbm12	100	86.527	ENSSTOG00000019739	RBM12	100	79.269	Ictidomys_tridecemlineatus
ENSPEMG00000017769	Rbm12	98	76.618	ENSJJAG00000009879	-	100	70.080	Jaculus_jaculus
ENSPEMG00000017769	Rbm12	100	80.876	ENSLAFG00000010341	RBM12	100	86.653	Loxodonta_africana
ENSPEMG00000017769	Rbm12	100	81.746	ENSMFAG00000032583	RBM12	98	79.761	Macaca_fascicularis
ENSPEMG00000017769	Rbm12	100	84.722	ENSMMUG00000020960	CPNE1	100	79.860	Macaca_mulatta
ENSPEMG00000017769	Rbm12	100	81.647	ENSMNEG00000045365	RBM12	98	79.860	Macaca_nemestrina
ENSPEMG00000017769	Rbm12	100	81.647	ENSMLEG00000032492	RBM12	98	79.860	Mandrillus_leucophaeus
ENSPEMG00000017769	Rbm12	89	85.561	ENSMGAG00000001502	RBM12	100	80.082	Meleagris_gallopavo
ENSPEMG00000017769	Rbm12	100	96.806	ENSMAUG00000012800	Rbm12	100	96.806	Mesocricetus_auratus
ENSPEMG00000017769	Rbm12	97	82.319	ENSMICG00000029540	-	73	67.013	Microcebus_murinus
ENSPEMG00000017769	Rbm12	94	95.751	ENSMICG00000032761	-	98	78.728	Microcebus_murinus
ENSPEMG00000017769	Rbm12	100	96.407	ENSMOCG00000012950	Rbm12	100	96.407	Microtus_ochrogaster
ENSPEMG00000017769	Rbm12	90	89.189	ENSMODG00000001591	RBM12	98	84.435	Monodelphis_domestica
ENSPEMG00000017769	Rbm12	100	96.226	MGP_CAROLIEiJ_G0024551	Rbm12	100	96.226	Mus_caroli
ENSPEMG00000017769	Rbm12	100	95.808	ENSMUSG00000089824	Rbm12	100	95.808	Mus_musculus
ENSPEMG00000017769	Rbm12	100	96.922	MGP_PahariEiJ_G0025996	Rbm12	100	96.922	Mus_pahari
ENSPEMG00000017769	Rbm12	100	96.407	MGP_SPRETEiJ_G0025473	Rbm12	100	96.407	Mus_spretus
ENSPEMG00000017769	Rbm12	97	94.760	ENSMPUG00000017789	-	75	94.540	Mustela_putorius_furo
ENSPEMG00000017769	Rbm12	100	85.956	ENSMLUG00000011217	RBM12	98	80.060	Myotis_lucifugus
ENSPEMG00000017769	Rbm12	100	94.112	ENSNGAG00000015846	Rbm12	100	94.112	Nannospalax_galili
ENSPEMG00000017769	Rbm12	100	81.647	ENSNLEG00000010268	RBM12	98	79.860	Nomascus_leucogenys
ENSPEMG00000017769	Rbm12	90	88.288	ENSMEUG00000007621	RBM12	74	83.621	Notamacropus_eugenii
ENSPEMG00000017769	Rbm12	100	83.383	ENSOPRG00000005687	RBM12	76	91.983	Ochotona_princeps
ENSPEMG00000017769	Rbm12	100	86.413	ENSODEG00000013870	RBM12	100	86.608	Octodon_degus
ENSPEMG00000017769	Rbm12	100	81.845	ENSPPAG00000040719	RBM12	98	80.060	Pan_paniscus
ENSPEMG00000017769	Rbm12	100	81.845	ENSPTRG00000040708	-	98	80.060	Pan_troglodytes
ENSPEMG00000017769	Rbm12	100	81.845	ENSPTRG00000013446	RBM12	98	80.060	Pan_troglodytes
ENSPEMG00000017769	Rbm12	100	81.647	ENSPANG00000020003	CPNE1	98	79.860	Papio_anubis
ENSPEMG00000017769	Rbm12	82	85.385	ENSPSIG00000007369	RBM12	98	85.385	Pelodiscus_sinensis
ENSPEMG00000017769	Rbm12	55	82.609	ENSPFOG00000023551	rbm12	93	78.873	Poecilia_formosa
ENSPEMG00000017769	Rbm12	100	81.485	ENSPPYG00000010960	RBM12	100	79.761	Pongo_abelii
ENSPEMG00000017769	Rbm12	99	92.197	ENSPCAG00000008653	RBM12	76	92.297	Procavia_capensis
ENSPEMG00000017769	Rbm12	100	81.132	ENSPCOG00000023724	RBM12	98	79.880	Propithecus_coquereli
ENSPEMG00000017769	Rbm12	100	85.259	ENSPVAG00000014937	RBM12	100	80.578	Pteropus_vampyrus
ENSPEMG00000017769	Rbm12	70	96.028	ENSRNOG00000049913	LOC100910990	100	91.957	Rattus_norvegicus
ENSPEMG00000017769	Rbm12	70	96.028	ENSRNOG00000019723	Rbm12	100	91.957	Rattus_norvegicus
ENSPEMG00000017769	Rbm12	100	85.119	ENSRBIG00000042965	RBM12	98	79.860	Rhinopithecus_bieti
ENSPEMG00000017769	Rbm12	100	85.119	ENSRROG00000037485	RBM12	98	79.860	Rhinopithecus_roxellana
ENSPEMG00000017769	Rbm12	100	84.508	ENSSBOG00000027633	RBM12	98	79.584	Saimiri_boliviensis_boliviensis
ENSPEMG00000017769	Rbm12	90	89.189	ENSSHAG00000018585	RBM12	100	84.435	Sarcophilus_harrisii
ENSPEMG00000017769	Rbm12	100	82.388	ENSSSCG00000036156	RBM12	100	80.677	Sus_scrofa
ENSPEMG00000017769	Rbm12	91	85.366	ENSTGUG00000003002	RBM12	100	85.366	Taeniopygia_guttata
ENSPEMG00000017769	Rbm12	100	86.155	ENSTTRG00000017035	RBM12	100	79.051	Tursiops_truncatus
ENSPEMG00000017769	Rbm12	100	85.857	ENSUAMG00000010430	RBM12	100	79.743	Ursus_americanus
ENSPEMG00000017769	Rbm12	74	100.000	ENSVPAG00000003812	RBM12	90	100.000	Vicugna_pacos
ENSPEMG00000017769	Rbm12	87	65.809	ENSXETG00000033541	RBM12	72	62.768	Xenopus_tropicalis