EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000017893 (Gene tree)
Gene ID: 102904971
Gene Symbol: Trub2
Alias: -
Full Name: TruB pseudouridine synthase family member 2
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 40798 bases
Position: chrKI615514.1:1242409-1283206
Accession: 102904971
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000019690	TruB_N	PF01509.18	5.3e-27	1	1
ENSPEMP00000019683	TruB_N	PF01509.18	2.8e-14	1	1
ENSPEMP00000019695	TruB_N	PF01509.18	2.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000024025	-	618	-	ENSPEMP00000019683	205 (aa)	-	-
ENSPEMT00000024037	-	564	-	ENSPEMP00000019695	187 (aa)	-	-
ENSPEMT00000024032	-	2191	XM_006983378	ENSPEMP00000019690	332 (aa)	XP_006983440	UPI00042A98BA

Gene Model

Click here to download ENSPEMG00000017893's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000017893's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000017893	Trub2	100	80.723	ENSG00000167112	TRUB2	100	80.723	Homo_sapiens
ENSPEMG00000017893	Trub2	84	43.011	ENSAPOG00000018284	-	76	58.394	Acanthochromis_polyacanthus
ENSPEMG00000017893	Trub2	62	56.585	ENSAPOG00000015733	trub2	74	56.585	Acanthochromis_polyacanthus
ENSPEMG00000017893	Trub2	99	79.154	ENSAMEG00000015395	TRUB2	99	79.154	Ailuropoda_melanoleuca
ENSPEMG00000017893	Trub2	92	47.977	ENSACIG00000016500	trub2	84	52.330	Amphilophus_citrinellus
ENSPEMG00000017893	Trub2	92	50.289	ENSAOCG00000002330	trub2	82	55.197	Amphiprion_ocellaris
ENSPEMG00000017893	Trub2	92	50.867	ENSAPEG00000013177	trub2	82	55.556	Amphiprion_percula
ENSPEMG00000017893	Trub2	92	51.445	ENSATEG00000011371	trub2	95	51.656	Anabas_testudineus
ENSPEMG00000017893	Trub2	87	56.552	ENSAPLG00000009254	TRUB2	94	56.314	Anas_platyrhynchos
ENSPEMG00000017893	Trub2	92	59.302	ENSACAG00000007331	TRUB2	89	62.799	Anolis_carolinensis
ENSPEMG00000017893	Trub2	96	83.799	ENSANAG00000036234	TRUB2	100	83.013	Aotus_nancymaae
ENSPEMG00000017893	Trub2	91	49.419	ENSACLG00000010793	trub2	84	53.047	Astatotilapia_calliptera
ENSPEMG00000017893	Trub2	93	52.299	ENSAMXG00000031679	trub2	83	54.422	Astyanax_mexicanus
ENSPEMG00000017893	Trub2	88	82.424	ENSBTAG00000004663	TRUB2	100	82.424	Bos_taurus
ENSPEMG00000017893	Trub2	53	80.791	ENSBTAG00000055269	-	80	80.791	Bos_taurus
ENSPEMG00000017893	Trub2	100	80.723	ENSCJAG00000020009	TRUB2	100	80.723	Callithrix_jacchus
ENSPEMG00000017893	Trub2	99	79.456	ENSCAFG00000020068	TRUB2	99	79.456	Canis_familiaris
ENSPEMG00000017893	Trub2	96	82.123	ENSCAFG00020017325	-	100	82.682	Canis_lupus_dingo
ENSPEMG00000017893	Trub2	99	81.571	ENSCHIG00000021160	TRUB2	99	81.571	Capra_hircus
ENSPEMG00000017893	Trub2	99	82.121	ENSTSYG00000034163	TRUB2	99	82.121	Carlito_syrichta
ENSPEMG00000017893	Trub2	87	81.661	ENSCAPG00000000223	TRUB2	97	81.661	Cavia_aperea
ENSPEMG00000017893	Trub2	96	86.111	ENSCPOG00000013535	TRUB2	98	81.902	Cavia_porcellus
ENSPEMG00000017893	Trub2	98	77.301	ENSCCAG00000028463	-	98	76.615	Cebus_capucinus
ENSPEMG00000017893	Trub2	96	83.240	ENSCCAG00000026531	-	98	80.997	Cebus_capucinus
ENSPEMG00000017893	Trub2	100	81.325	ENSCATG00000038234	TRUB2	100	81.325	Cercocebus_atys
ENSPEMG00000017893	Trub2	98	84.153	ENSCLAG00000001702	TRUB2	99	82.822	Chinchilla_lanigera
ENSPEMG00000017893	Trub2	99	77.410	ENSCSAG00000014117	TRUB2	99	77.410	Chlorocebus_sabaeus
ENSPEMG00000017893	Trub2	100	80.422	ENSCHOG00000001555	TRUB2	100	80.422	Choloepus_hoffmanni
ENSPEMG00000017893	Trub2	95	58.989	ENSCPBG00000025186	TRUB2	87	61.745	Chrysemys_picta_bellii
ENSPEMG00000017893	Trub2	91	35.057	ENSCSAVG00000003930	-	90	33.559	Ciona_savignyi
ENSPEMG00000017893	Trub2	100	73.795	ENSCANG00000016135	TRUB2	100	73.795	Colobus_angolensis_palliatus
ENSPEMG00000017893	Trub2	100	90.909	ENSCGRG00001024441	Trub2	100	90.909	Cricetulus_griseus_chok1gshd
ENSPEMG00000017893	Trub2	100	89.759	ENSCGRG00000005633	Trub2	100	89.759	Cricetulus_griseus_crigri
ENSPEMG00000017893	Trub2	91	49.708	ENSCSEG00000001331	trub2	89	50.168	Cynoglossus_semilaevis
ENSPEMG00000017893	Trub2	89	51.515	ENSCVAG00000009901	trub2	88	51.515	Cyprinodon_variegatus
ENSPEMG00000017893	Trub2	95	51.124	ENSDARG00000028379	trub2	86	50.327	Danio_rerio
ENSPEMG00000017893	Trub2	91	58.086	ENSDNOG00000043967	-	92	58.086	Dasypus_novemcinctus
ENSPEMG00000017893	Trub2	99	77.879	ENSDNOG00000045679	-	99	77.879	Dasypus_novemcinctus
ENSPEMG00000017893	Trub2	99	80.120	ENSDORG00000016222	Trub2	97	82.258	Dipodomys_ordii
ENSPEMG00000017893	Trub2	88	32.558	FBgn0033060	CG7849	94	32.558	Drosophila_melanogaster
ENSPEMG00000017893	Trub2	95	78.652	ENSETEG00000009114	TRUB2	92	81.940	Echinops_telfairi
ENSPEMG00000017893	Trub2	90	37.569	ENSEBUG00000015723	trub2	82	51.471	Eptatretus_burgeri
ENSPEMG00000017893	Trub2	100	81.325	ENSEASG00005016819	TRUB2	100	81.325	Equus_asinus_asinus
ENSPEMG00000017893	Trub2	100	81.325	ENSECAG00000023520	TRUB2	100	81.325	Equus_caballus
ENSPEMG00000017893	Trub2	95	84.831	ENSEEUG00000008908	TRUB2	98	82.609	Erinaceus_europaeus
ENSPEMG00000017893	Trub2	91	50.270	ENSELUG00000002376	trub2	91	53.767	Esox_lucius
ENSPEMG00000017893	Trub2	96	82.873	ENSFCAG00000005839	TRUB2	100	78.443	Felis_catus
ENSPEMG00000017893	Trub2	80	60.755	ENSFALG00000001364	TRUB2	85	61.887	Ficedula_albicollis
ENSPEMG00000017893	Trub2	100	82.353	ENSFDAG00000021374	TRUB2	99	82.779	Fukomys_damarensis
ENSPEMG00000017893	Trub2	86	48.097	ENSFHEG00000014655	trub2	85	48.097	Fundulus_heteroclitus
ENSPEMG00000017893	Trub2	91	38.596	ENSGMOG00000000981	trub2	92	45.487	Gadus_morhua
ENSPEMG00000017893	Trub2	95	54.749	ENSGALG00000004920	TRUB2	73	59.532	Gallus_gallus
ENSPEMG00000017893	Trub2	91	50.292	ENSGAFG00000010107	trub2	87	51.877	Gambusia_affinis
ENSPEMG00000017893	Trub2	96	50.156	ENSGACG00000001476	trub2	94	50.156	Gasterosteus_aculeatus
ENSPEMG00000017893	Trub2	91	63.158	ENSGAGG00000022872	TRUB2	86	64.605	Gopherus_agassizii
ENSPEMG00000017893	Trub2	100	81.024	ENSGGOG00000014780	TRUB2	100	81.024	Gorilla_gorilla
ENSPEMG00000017893	Trub2	91	49.419	ENSHBUG00000022384	trub2	84	53.763	Haplochromis_burtoni
ENSPEMG00000017893	Trub2	99	82.175	ENSHGLG00000016715	TRUB2	99	82.175	Heterocephalus_glaber_female
ENSPEMG00000017893	Trub2	99	82.175	ENSHGLG00100016548	TRUB2	99	82.175	Heterocephalus_glaber_male
ENSPEMG00000017893	Trub2	93	50.575	ENSHCOG00000017748	trub2	85	54.676	Hippocampus_comes
ENSPEMG00000017893	Trub2	93	48.851	ENSIPUG00000017725	hdhd3	51	52.381	Ictalurus_punctatus
ENSPEMG00000017893	Trub2	99	81.098	ENSSTOG00000022617	-	99	81.098	Ictidomys_tridecemlineatus
ENSPEMG00000017893	Trub2	100	80.723	ENSSTOG00000008024	-	100	80.723	Ictidomys_tridecemlineatus
ENSPEMG00000017893	Trub2	98	77.469	ENSJJAG00000019181	Trub2	97	77.469	Jaculus_jaculus
ENSPEMG00000017893	Trub2	91	49.123	ENSKMAG00000007861	trub2	83	53.237	Kryptolebias_marmoratus
ENSPEMG00000017893	Trub2	93	50.867	ENSLBEG00000000907	trub2	89	50.825	Labrus_bergylta
ENSPEMG00000017893	Trub2	91	61.765	ENSLACG00000001515	TRUB2	85	62.369	Latimeria_chalumnae
ENSPEMG00000017893	Trub2	91	57.803	ENSLOCG00000000885	trub2	96	56.997	Lepisosteus_oculatus
ENSPEMG00000017893	Trub2	96	83.240	ENSLAFG00000002174	TRUB2	99	85.333	Loxodonta_africana
ENSPEMG00000017893	Trub2	100	80.723	ENSMFAG00000000881	TRUB2	100	80.723	Macaca_fascicularis
ENSPEMG00000017893	Trub2	100	80.422	ENSMMUG00000014146	TRUB2	100	80.422	Macaca_mulatta
ENSPEMG00000017893	Trub2	100	80.422	ENSMNEG00000011189	TRUB2	100	80.422	Macaca_nemestrina
ENSPEMG00000017893	Trub2	100	81.325	ENSMLEG00000037270	TRUB2	100	81.325	Mandrillus_leucophaeus
ENSPEMG00000017893	Trub2	92	50.289	ENSMAMG00000023643	trub2	92	54.480	Mastacembelus_armatus
ENSPEMG00000017893	Trub2	91	49.419	ENSMZEG00005016018	trub2	84	53.405	Maylandia_zebra
ENSPEMG00000017893	Trub2	60	64.322	ENSMGAG00000003894	TRUB2	99	64.322	Meleagris_gallopavo
ENSPEMG00000017893	Trub2	98	93.989	ENSMAUG00000010403	Trub2	100	91.867	Mesocricetus_auratus
ENSPEMG00000017893	Trub2	99	81.269	ENSMICG00000047032	TRUB2	99	81.269	Microcebus_murinus
ENSPEMG00000017893	Trub2	100	89.756	ENSMOCG00000014291	Trub2	99	94.020	Microtus_ochrogaster
ENSPEMG00000017893	Trub2	92	53.179	ENSMMOG00000021674	trub2	86	54.839	Mola_mola
ENSPEMG00000017893	Trub2	94	68.571	ENSMODG00000005940	TRUB2	99	72.696	Monodelphis_domestica
ENSPEMG00000017893	Trub2	92	52.273	ENSMALG00000021231	trub2	83	55.674	Monopterus_albus
ENSPEMG00000017893	Trub2	100	89.157	MGP_CAROLIEiJ_G0023368	Trub2	100	89.157	Mus_caroli
ENSPEMG00000017893	Trub2	100	89.157	ENSMUSG00000039826	Trub2	100	89.157	Mus_musculus
ENSPEMG00000017893	Trub2	100	88.554	MGP_PahariEiJ_G0024826	Trub2	100	88.554	Mus_pahari
ENSPEMG00000017893	Trub2	100	89.458	MGP_SPRETEiJ_G0024286	Trub2	100	89.458	Mus_spretus
ENSPEMG00000017893	Trub2	100	77.410	ENSMPUG00000013206	TRUB2	91	77.410	Mustela_putorius_furo
ENSPEMG00000017893	Trub2	98	80.864	ENSMLUG00000005256	TRUB2	97	80.864	Myotis_lucifugus
ENSPEMG00000017893	Trub2	100	85.241	ENSNGAG00000018679	Trub2	100	85.241	Nannospalax_galili
ENSPEMG00000017893	Trub2	91	49.419	ENSNBRG00000016294	trub2	84	53.047	Neolamprologus_brichardi
ENSPEMG00000017893	Trub2	100	79.819	ENSNLEG00000017556	TRUB2	100	79.819	Nomascus_leucogenys
ENSPEMG00000017893	Trub2	96	71.508	ENSMEUG00000000484	TRUB2	95	74.747	Notamacropus_eugenii
ENSPEMG00000017893	Trub2	99	79.456	ENSOPRG00000001981	TRUB2	100	79.456	Ochotona_princeps
ENSPEMG00000017893	Trub2	98	81.040	ENSODEG00000017292	TRUB2	99	81.040	Octodon_degus
ENSPEMG00000017893	Trub2	91	49.419	ENSONIG00000004230	trub2	84	53.047	Oreochromis_niloticus
ENSPEMG00000017893	Trub2	76	76.224	ENSOANG00000029023	-	83	76.064	Ornithorhynchus_anatinus
ENSPEMG00000017893	Trub2	99	80.909	ENSOCUG00000026296	TRUB2	91	81.024	Oryctolagus_cuniculus
ENSPEMG00000017893	Trub2	89	50.671	ENSORLG00000020011	trub2	89	50.671	Oryzias_latipes
ENSPEMG00000017893	Trub2	89	51.178	ENSORLG00020011028	trub2	86	51.178	Oryzias_latipes_hni
ENSPEMG00000017893	Trub2	89	51.178	ENSORLG00015007494	trub2	90	51.178	Oryzias_latipes_hsok
ENSPEMG00000017893	Trub2	92	52.023	ENSOMEG00000006702	trub2	84	54.839	Oryzias_melastigma
ENSPEMG00000017893	Trub2	84	82.166	ENSOGAG00000003511	-	95	82.166	Otolemur_garnettii
ENSPEMG00000017893	Trub2	76	80.080	ENSOARG00000003785	-	99	80.080	Ovis_aries
ENSPEMG00000017893	Trub2	99	81.269	ENSOARG00000010579	-	99	81.269	Ovis_aries
ENSPEMG00000017893	Trub2	100	81.024	ENSPPAG00000043146	TRUB2	100	81.024	Pan_paniscus
ENSPEMG00000017893	Trub2	96	82.873	ENSPPRG00000006307	TRUB2	100	78.443	Panthera_pardus
ENSPEMG00000017893	Trub2	96	82.320	ENSPTIG00000012366	TRUB2	100	78.144	Panthera_tigris_altaica
ENSPEMG00000017893	Trub2	100	80.723	ENSPTRG00000021423	TRUB2	100	80.723	Pan_troglodytes
ENSPEMG00000017893	Trub2	100	80.723	ENSPTRG00000052151	-	100	80.723	Pan_troglodytes
ENSPEMG00000017893	Trub2	100	81.627	ENSPANG00000025856	TRUB2	100	81.627	Papio_anubis
ENSPEMG00000017893	Trub2	91	54.386	ENSPKIG00000019769	trub2	91	54.643	Paramormyrops_kingsleyae
ENSPEMG00000017893	Trub2	88	58.763	ENSPSIG00000015701	TRUB2	97	58.763	Pelodiscus_sinensis
ENSPEMG00000017893	Trub2	96	50.000	ENSPMGG00000010206	trub2	98	50.476	Periophthalmus_magnuspinnatus
ENSPEMG00000017893	Trub2	96	70.950	ENSPCIG00000026731	TRUB2	95	73.737	Phascolarctos_cinereus
ENSPEMG00000017893	Trub2	91	49.708	ENSPFOG00000018018	trub2	77	51.712	Poecilia_formosa
ENSPEMG00000017893	Trub2	91	49.708	ENSPLAG00000010484	trub2	83	51.712	Poecilia_latipinna
ENSPEMG00000017893	Trub2	91	49.708	ENSPMEG00000012913	trub2	86	51.370	Poecilia_mexicana
ENSPEMG00000017893	Trub2	91	49.123	ENSPREG00000002549	trub2	86	51.034	Poecilia_reticulata
ENSPEMG00000017893	Trub2	98	80.734	ENSPPYG00000019650	TRUB2	100	80.734	Pongo_abelii
ENSPEMG00000017893	Trub2	100	80.723	ENSPCAG00000015068	TRUB2	100	80.723	Procavia_capensis
ENSPEMG00000017893	Trub2	100	82.530	ENSPCOG00000017100	TRUB2	100	82.530	Propithecus_coquereli
ENSPEMG00000017893	Trub2	90	82.550	ENSPVAG00000001224	TRUB2	99	82.550	Pteropus_vampyrus
ENSPEMG00000017893	Trub2	91	49.419	ENSPNYG00000013666	trub2	84	53.405	Pundamilia_nyererei
ENSPEMG00000017893	Trub2	93	52.299	ENSPNAG00000017292	trub2	80	54.643	Pygocentrus_nattereri
ENSPEMG00000017893	Trub2	96	88.268	ENSRNOG00000043189	Trub2	98	87.774	Rattus_norvegicus
ENSPEMG00000017893	Trub2	100	74.096	ENSRBIG00000006965	TRUB2	100	74.096	Rhinopithecus_bieti
ENSPEMG00000017893	Trub2	100	81.627	ENSRROG00000042928	TRUB2	100	81.627	Rhinopithecus_roxellana
ENSPEMG00000017893	Trub2	100	80.422	ENSSBOG00000022439	TRUB2	100	80.422	Saimiri_boliviensis_boliviensis
ENSPEMG00000017893	Trub2	91	53.529	ENSSFOG00015013391	trub2	89	55.556	Scleropages_formosus
ENSPEMG00000017893	Trub2	96	51.250	ENSSMAG00000020820	trub2	96	51.250	Scophthalmus_maximus
ENSPEMG00000017893	Trub2	92	49.711	ENSSDUG00000016928	trub2	83	53.405	Seriola_dumerili
ENSPEMG00000017893	Trub2	92	50.289	ENSSLDG00000024701	trub2	83	53.763	Seriola_lalandi_dorsalis
ENSPEMG00000017893	Trub2	96	55.249	ENSSPUG00000015515	TRUB2	90	57.807	Sphenodon_punctatus
ENSPEMG00000017893	Trub2	91	51.462	ENSSPAG00000017865	trub2	84	55.556	Stegastes_partitus
ENSPEMG00000017893	Trub2	100	81.627	ENSSSCG00000005645	TRUB2	99	81.081	Sus_scrofa
ENSPEMG00000017893	Trub2	79	63.359	ENSTGUG00000003704	TRUB2	99	63.359	Taeniopygia_guttata
ENSPEMG00000017893	Trub2	93	45.143	ENSTRUG00000015499	trub2	86	50.890	Takifugu_rubripes
ENSPEMG00000017893	Trub2	93	49.432	ENSTNIG00000014721	trub2	96	52.837	Tetraodon_nigroviridis
ENSPEMG00000017893	Trub2	68	76.444	ENSTBEG00000000586	TRUB2	100	76.444	Tupaia_belangeri
ENSPEMG00000017893	Trub2	96	81.564	ENSTTRG00000016486	TRUB2	100	76.807	Tursiops_truncatus
ENSPEMG00000017893	Trub2	99	80.363	ENSUAMG00000020276	TRUB2	96	80.363	Ursus_americanus
ENSPEMG00000017893	Trub2	99	80.363	ENSUMAG00000022051	TRUB2	96	80.363	Ursus_maritimus
ENSPEMG00000017893	Trub2	95	71.910	ENSVPAG00000005793	TRUB2	100	61.950	Vicugna_pacos
ENSPEMG00000017893	Trub2	96	82.682	ENSVVUG00000013451	TRUB2	85	83.667	Vulpes_vulpes
ENSPEMG00000017893	Trub2	91	59.468	ENSXETG00000003973	trub2	92	59.468	Xenopus_tropicalis
ENSPEMG00000017893	Trub2	91	50.292	ENSXCOG00000008759	trub2	83	53.047	Xiphophorus_couchianus
ENSPEMG00000017893	Trub2	91	49.708	ENSXMAG00000015478	trub2	83	53.047	Xiphophorus_maculatus