EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000017971 (Gene tree)
Gene ID: 102925440
Gene Symbol: Rab5c
Alias: -
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 23225 bases
Position: chrKI615944.1:836043-859267
Accession: 102925440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000019790	MMR_HSR1	PF01926.23	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000024133	-	1916	XM_006992893	ENSPEMP00000019790	216 (aa)	XP_006992955	UPI00038C41FA

Gene Model

Click here to download ENSPEMG00000017971's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000017971's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000017971	Rab5c	91	46.939	ENSPEMG00000009456	Rab31	98	46.939
ENSPEMG00000017971	Rab5c	87	41.579	ENSPEMG00000023981	Rab2b	88	41.579
ENSPEMG00000017971	Rab5c	80	35.838	ENSPEMG00000023271	Rab23	73	35.838
ENSPEMG00000017971	Rab5c	81	33.702	ENSPEMG00000013973	-	94	33.702
ENSPEMG00000017971	Rab5c	89	44.330	ENSPEMG00000014878	-	96	44.330
ENSPEMG00000017971	Rab5c	75	36.585	ENSPEMG00000017587	Rab39b	77	36.585
ENSPEMG00000017971	Rab5c	97	87.081	ENSPEMG00000017625	Rab5b	97	87.081
ENSPEMG00000017971	Rab5c	55	31.707	ENSPEMG00000009150	Arl8a	62	31.707
ENSPEMG00000017971	Rab5c	77	32.934	ENSPEMG00000000572	Kras	90	32.164
ENSPEMG00000017971	Rab5c	71	35.948	ENSPEMG00000024045	Rabl2	67	35.948
ENSPEMG00000017971	Rab5c	90	41.379	ENSPEMG00000007548	Rab25	94	41.379
ENSPEMG00000017971	Rab5c	90	41.262	ENSPEMG00000021125	-	94	41.262
ENSPEMG00000017971	Rab5c	79	35.057	ENSPEMG00000023681	Rab36	64	35.057
ENSPEMG00000017971	Rab5c	78	42.262	ENSPEMG00000023854	Rab30	83	42.262
ENSPEMG00000017971	Rab5c	89	34.343	ENSPEMG00000016854	Rab9	97	34.343
ENSPEMG00000017971	Rab5c	75	47.826	ENSPEMG00000005147	-	77	47.826
ENSPEMG00000017971	Rab5c	81	37.143	ENSPEMG00000017973	Rab15	83	37.143
ENSPEMG00000017971	Rab5c	94	41.379	ENSPEMG00000008933	Rab6b	98	41.379
ENSPEMG00000017971	Rab5c	89	43.077	ENSPEMG00000009340	Rab1a	95	43.077
ENSPEMG00000017971	Rab5c	90	47.423	ENSPEMG00000000644	Rab22a	98	47.423
ENSPEMG00000017971	Rab5c	100	87.037	ENSPEMG00000019311	Rab5a	100	87.037
ENSPEMG00000017971	Rab5c	77	42.442	ENSPEMG00000010928	Rab7	83	42.442
ENSPEMG00000017971	Rab5c	75	40.361	ENSPEMG00000010237	Rab33a	70	40.361
ENSPEMG00000017971	Rab5c	73	31.875	ENSPEMG00000015055	Rab34	62	31.875
ENSPEMG00000017971	Rab5c	78	33.728	ENSPEMG00000010658	-	78	33.728
ENSPEMG00000017971	Rab5c	91	39.594	ENSPEMG00000019445	Rab18	94	39.594
ENSPEMG00000017971	Rab5c	75	31.902	ENSPEMG00000021912	Nras	85	31.902
ENSPEMG00000017971	Rab5c	90	42.512	ENSPEMG00000014536	Rab11b	94	42.512
ENSPEMG00000017971	Rab5c	77	36.047	ENSPEMG00000011803	Rab9b	97	36.364
ENSPEMG00000017971	Rab5c	81	44.000	ENSPEMG00000020880	Rab6a	84	44.000
ENSPEMG00000017971	Rab5c	86	37.824	ENSPEMG00000021032	Rab12	64	37.824
ENSPEMG00000017971	Rab5c	86	39.785	ENSPEMG00000000242	Rab14	87	39.785
ENSPEMG00000017971	Rab5c	55	31.967	ENSPEMG00000016722	Arl8b	62	31.967
ENSPEMG00000017971	Rab5c	93	38.350	ENSPEMG00000017646	Rab33b	89	38.350

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000017971	Rab5c	100	98.148	ENSG00000108774	RAB5C	100	100.000	Homo_sapiens
ENSPEMG00000017971	Rab5c	99	88.837	ENSAPOG00000016864	rab5c	98	91.163	Acanthochromis_polyacanthus
ENSPEMG00000017971	Rab5c	100	98.148	ENSAMEG00000006003	RAB5C	100	98.148	Ailuropoda_melanoleuca
ENSPEMG00000017971	Rab5c	99	88.426	ENSACIG00000010896	rab5c	98	90.741	Amphilophus_citrinellus
ENSPEMG00000017971	Rab5c	99	88.889	ENSAOCG00000016614	rab5c	98	91.204	Amphiprion_ocellaris
ENSPEMG00000017971	Rab5c	97	88.626	ENSAPEG00000017868	-	97	90.995	Amphiprion_percula
ENSPEMG00000017971	Rab5c	100	89.450	ENSATEG00000001937	rab5c	100	91.284	Anabas_testudineus
ENSPEMG00000017971	Rab5c	94	99.020	ENSANAG00000025390	RAB5C	100	99.020	Aotus_nancymaae
ENSPEMG00000017971	Rab5c	99	87.500	ENSACLG00000002706	rab5c	98	90.278	Astatotilapia_calliptera
ENSPEMG00000017971	Rab5c	96	89.100	ENSACLG00000008615	-	99	88.584	Astatotilapia_calliptera
ENSPEMG00000017971	Rab5c	96	89.048	ENSAMXG00000037267	-	99	91.429	Astyanax_mexicanus
ENSPEMG00000017971	Rab5c	99	89.401	ENSAMXG00000043717	rab5c	98	91.705	Astyanax_mexicanus
ENSPEMG00000017971	Rab5c	100	98.148	ENSBTAG00000006982	RAB5C	100	98.148	Bos_taurus
ENSPEMG00000017971	Rab5c	99	75.463	WBGene00004268	rab-5	99	75.463	Caenorhabditis_elegans
ENSPEMG00000017971	Rab5c	100	98.611	ENSCAFG00000015629	RAB5C	100	98.611	Canis_familiaris
ENSPEMG00000017971	Rab5c	100	98.611	ENSCAFG00020013537	RAB5C	100	98.611	Canis_lupus_dingo
ENSPEMG00000017971	Rab5c	100	98.148	ENSCHIG00000012960	RAB5C	100	98.148	Capra_hircus
ENSPEMG00000017971	Rab5c	100	98.611	ENSTSYG00000030531	RAB5C	100	98.611	Carlito_syrichta
ENSPEMG00000017971	Rab5c	100	98.611	ENSCCAG00000025940	RAB5C	100	98.611	Cebus_capucinus
ENSPEMG00000017971	Rab5c	100	98.148	ENSCATG00000040873	RAB5C	100	98.148	Cercocebus_atys
ENSPEMG00000017971	Rab5c	100	98.148	ENSCLAG00000016650	RAB5C	100	98.148	Chinchilla_lanigera
ENSPEMG00000017971	Rab5c	82	99.438	ENSCHOG00000009886	RAB5C	100	99.438	Choloepus_hoffmanni
ENSPEMG00000017971	Rab5c	99	76.168	ENSCING00000003340	-	99	76.168	Ciona_intestinalis
ENSPEMG00000017971	Rab5c	99	74.545	ENSCSAVG00000000613	-	99	83.333	Ciona_savignyi
ENSPEMG00000017971	Rab5c	100	99.074	ENSCGRG00001014226	Rab5c	100	99.074	Cricetulus_griseus_chok1gshd
ENSPEMG00000017971	Rab5c	100	99.074	ENSCGRG00000007534	Rab5c	100	99.074	Cricetulus_griseus_crigri
ENSPEMG00000017971	Rab5c	99	91.204	ENSCSEG00000017024	rab5c	98	91.204	Cynoglossus_semilaevis
ENSPEMG00000017971	Rab5c	99	88.889	ENSCVAG00000009550	rab5c	98	91.204	Cyprinodon_variegatus
ENSPEMG00000017971	Rab5c	100	98.148	ENSDNOG00000038853	RAB5C	100	98.148	Dasypus_novemcinctus
ENSPEMG00000017971	Rab5c	100	97.685	ENSDORG00000006819	Rab5c	100	97.685	Dipodomys_ordii
ENSPEMG00000017971	Rab5c	99	73.709	FBgn0014010	Rab5	95	73.709	Drosophila_melanogaster
ENSPEMG00000017971	Rab5c	99	79.070	ENSEBUG00000014794	rab5c	100	79.070	Eptatretus_burgeri
ENSPEMG00000017971	Rab5c	100	98.148	ENSEASG00005009281	RAB5C	100	98.148	Equus_asinus_asinus
ENSPEMG00000017971	Rab5c	100	98.611	ENSECAG00000025054	RAB5C	100	98.611	Equus_caballus
ENSPEMG00000017971	Rab5c	100	98.148	ENSEEUG00000002790	RAB5C	100	98.148	Erinaceus_europaeus
ENSPEMG00000017971	Rab5c	99	88.426	ENSELUG00000010439	-	98	88.426	Esox_lucius
ENSPEMG00000017971	Rab5c	99	87.500	ENSELUG00000018516	rab5c	99	90.278	Esox_lucius
ENSPEMG00000017971	Rab5c	100	98.148	ENSFCAG00000002148	RAB5C	100	98.148	Felis_catus
ENSPEMG00000017971	Rab5c	100	96.296	ENSFDAG00000021541	RAB5C	100	96.296	Fukomys_damarensis
ENSPEMG00000017971	Rab5c	99	88.889	ENSFHEG00000012117	rab5c	98	91.204	Fundulus_heteroclitus
ENSPEMG00000017971	Rab5c	99	91.705	ENSFHEG00000015268	-	99	91.705	Fundulus_heteroclitus
ENSPEMG00000017971	Rab5c	99	87.500	ENSGMOG00000015096	rab5c	98	90.278	Gadus_morhua
ENSPEMG00000017971	Rab5c	78	88.166	ENSGMOG00000001876	-	98	88.166	Gadus_morhua
ENSPEMG00000017971	Rab5c	99	89.352	ENSGAFG00000000884	rab5c	98	91.667	Gambusia_affinis
ENSPEMG00000017971	Rab5c	96	91.429	ENSGAFG00000003642	-	99	88.636	Gambusia_affinis
ENSPEMG00000017971	Rab5c	87	94.681	ENSGACG00000008659	rab5c	98	87.037	Gasterosteus_aculeatus
ENSPEMG00000017971	Rab5c	100	98.148	ENSGGOG00000005472	RAB5C	100	98.148	Gorilla_gorilla
ENSPEMG00000017971	Rab5c	99	87.500	ENSHBUG00000002014	rab5c	98	90.278	Haplochromis_burtoni
ENSPEMG00000017971	Rab5c	96	89.100	ENSHBUG00000006823	-	99	88.584	Haplochromis_burtoni
ENSPEMG00000017971	Rab5c	100	95.370	ENSHGLG00000012067	RAB5C	100	95.370	Heterocephalus_glaber_female
ENSPEMG00000017971	Rab5c	99	89.401	ENSHCOG00000004662	rab5c	97	91.244	Hippocampus_comes
ENSPEMG00000017971	Rab5c	97	82.075	ENSHCOG00000020238	-	100	80.455	Hippocampus_comes
ENSPEMG00000017971	Rab5c	96	87.619	ENSIPUG00000020082	rab5c	98	88.532	Ictalurus_punctatus
ENSPEMG00000017971	Rab5c	100	97.685	ENSSTOG00000006620	RAB5C	100	97.685	Ictidomys_tridecemlineatus
ENSPEMG00000017971	Rab5c	100	98.611	ENSJJAG00000021181	Rab5c	100	98.611	Jaculus_jaculus
ENSPEMG00000017971	Rab5c	99	88.940	ENSKMAG00000017417	-	99	88.940	Kryptolebias_marmoratus
ENSPEMG00000017971	Rab5c	99	88.426	ENSKMAG00000020038	rab5c	98	91.204	Kryptolebias_marmoratus
ENSPEMG00000017971	Rab5c	99	89.815	ENSLBEG00000004128	rab5c	98	92.130	Labrus_bergylta
ENSPEMG00000017971	Rab5c	100	88.073	ENSLBEG00000010408	-	99	88.073	Labrus_bergylta
ENSPEMG00000017971	Rab5c	99	93.925	ENSLOCG00000012566	rab5c	100	93.925	Lepisosteus_oculatus
ENSPEMG00000017971	Rab5c	100	98.148	ENSMFAG00000039627	RAB5C	100	98.148	Macaca_fascicularis
ENSPEMG00000017971	Rab5c	100	98.148	ENSMNEG00000000355	RAB5C	100	98.148	Macaca_nemestrina
ENSPEMG00000017971	Rab5c	99	87.963	ENSMAMG00000022322	rab5c	98	90.741	Mastacembelus_armatus
ENSPEMG00000017971	Rab5c	99	88.479	ENSMAMG00000016207	-	99	88.479	Mastacembelus_armatus
ENSPEMG00000017971	Rab5c	99	87.500	ENSMZEG00005022735	rab5c	98	90.278	Maylandia_zebra
ENSPEMG00000017971	Rab5c	96	89.100	ENSMZEG00005021090	-	99	88.584	Maylandia_zebra
ENSPEMG00000017971	Rab5c	100	99.074	ENSMAUG00000015005	Rab5c	100	99.074	Mesocricetus_auratus
ENSPEMG00000017971	Rab5c	100	98.148	ENSMICG00000041608	RAB5C	100	98.148	Microcebus_murinus
ENSPEMG00000017971	Rab5c	100	100.000	ENSMOCG00000018531	-	100	100.000	Microtus_ochrogaster
ENSPEMG00000017971	Rab5c	100	89.908	ENSMMOG00000020621	rab5c	99	89.908	Mola_mola
ENSPEMG00000017971	Rab5c	97	84.360	ENSMALG00000006052	rab5c	96	84.186	Monopterus_albus
ENSPEMG00000017971	Rab5c	99	87.615	ENSMALG00000022348	-	99	87.615	Monopterus_albus
ENSPEMG00000017971	Rab5c	100	98.611	MGP_CAROLIEiJ_G0017184	Rab5c	100	98.611	Mus_caroli
ENSPEMG00000017971	Rab5c	100	98.611	ENSMUSG00000019173	Rab5c	100	98.611	Mus_musculus
ENSPEMG00000017971	Rab5c	100	98.611	MGP_PahariEiJ_G0018314	Rab5c	100	98.611	Mus_pahari
ENSPEMG00000017971	Rab5c	100	98.611	MGP_SPRETEiJ_G0018027	Rab5c	100	98.611	Mus_spretus
ENSPEMG00000017971	Rab5c	100	98.148	ENSMPUG00000010554	RAB5C	100	98.148	Mustela_putorius_furo
ENSPEMG00000017971	Rab5c	100	98.148	ENSNGAG00000010286	Rab5c	100	98.148	Nannospalax_galili
ENSPEMG00000017971	Rab5c	99	88.426	ENSNBRG00000018165	rab5c	98	91.204	Neolamprologus_brichardi
ENSPEMG00000017971	Rab5c	96	89.100	ENSNBRG00000016922	-	99	88.584	Neolamprologus_brichardi
ENSPEMG00000017971	Rab5c	82	92.697	ENSOPRG00000008255	RAB5C	100	92.697	Ochotona_princeps
ENSPEMG00000017971	Rab5c	100	97.222	ENSODEG00000017920	RAB5C	100	97.222	Octodon_degus
ENSPEMG00000017971	Rab5c	99	88.426	ENSONIG00000001113	rab5c	98	91.204	Oreochromis_niloticus
ENSPEMG00000017971	Rab5c	100	88.073	ENSORLG00000003882	rab5c	100	89.908	Oryzias_latipes
ENSPEMG00000017971	Rab5c	100	89.450	ENSORLG00020008388	rab5c	100	89.450	Oryzias_latipes_hni
ENSPEMG00000017971	Rab5c	100	88.073	ENSORLG00015021900	rab5c	100	89.908	Oryzias_latipes_hsok
ENSPEMG00000017971	Rab5c	100	88.073	ENSOMEG00000023078	rab5c	100	89.908	Oryzias_melastigma
ENSPEMG00000017971	Rab5c	100	98.148	ENSOGAG00000009456	RAB5C	100	98.148	Otolemur_garnettii
ENSPEMG00000017971	Rab5c	100	98.148	ENSOARG00000018768	RAB5C	100	98.148	Ovis_aries
ENSPEMG00000017971	Rab5c	100	98.148	ENSPPAG00000037206	RAB5C	100	98.148	Pan_paniscus
ENSPEMG00000017971	Rab5c	100	98.148	ENSPPRG00000005745	RAB5C	100	98.148	Panthera_pardus
ENSPEMG00000017971	Rab5c	100	98.148	ENSPTIG00000008177	RAB5C	100	98.148	Panthera_tigris_altaica
ENSPEMG00000017971	Rab5c	100	98.148	ENSPTRG00000009194	RAB5C	100	98.148	Pan_troglodytes
ENSPEMG00000017971	Rab5c	99	89.302	ENSPKIG00000001237	-	99	89.302	Paramormyrops_kingsleyae
ENSPEMG00000017971	Rab5c	99	87.963	ENSPKIG00000020112	-	99	87.963	Paramormyrops_kingsleyae
ENSPEMG00000017971	Rab5c	99	86.111	ENSPMGG00000010792	rab5c	97	90.521	Periophthalmus_magnuspinnatus
ENSPEMG00000017971	Rab5c	99	78.829	ENSPMAG00000000008	rab5c	100	78.829	Petromyzon_marinus
ENSPEMG00000017971	Rab5c	99	78.605	ENSPMAG00000007867	rab5c	100	78.605	Petromyzon_marinus
ENSPEMG00000017971	Rab5c	99	79.535	ENSPMAG00000001399	rab5c	100	79.535	Petromyzon_marinus
ENSPEMG00000017971	Rab5c	100	97.222	ENSPCIG00000020225	-	100	97.222	Phascolarctos_cinereus
ENSPEMG00000017971	Rab5c	99	90.323	ENSPLAG00000016333	-	99	90.323	Poecilia_latipinna
ENSPEMG00000017971	Rab5c	99	89.352	ENSPLAG00000004790	rab5c	98	91.667	Poecilia_latipinna
ENSPEMG00000017971	Rab5c	98	88.732	ENSPMEG00000012614	-	98	89.041	Poecilia_mexicana
ENSPEMG00000017971	Rab5c	99	89.352	ENSPMEG00000011336	rab5c	98	91.667	Poecilia_mexicana
ENSPEMG00000017971	Rab5c	87	92.593	ENSPREG00000022167	-	89	93.989	Poecilia_reticulata
ENSPEMG00000017971	Rab5c	99	89.352	ENSPREG00000010146	rab5c	98	91.667	Poecilia_reticulata
ENSPEMG00000017971	Rab5c	100	98.148	ENSPPYG00000008398	RAB5C	100	98.148	Pongo_abelii
ENSPEMG00000017971	Rab5c	100	97.222	ENSPCAG00000016412	RAB5C	100	97.222	Procavia_capensis
ENSPEMG00000017971	Rab5c	100	97.222	ENSPCOG00000026327	RAB5C	100	97.222	Propithecus_coquereli
ENSPEMG00000017971	Rab5c	100	98.611	ENSPVAG00000003867	RAB5C	100	98.611	Pteropus_vampyrus
ENSPEMG00000017971	Rab5c	99	87.500	ENSPNYG00000010615	rab5c	98	90.278	Pundamilia_nyererei
ENSPEMG00000017971	Rab5c	96	89.100	ENSPNYG00000015851	-	99	88.584	Pundamilia_nyererei
ENSPEMG00000017971	Rab5c	99	91.244	ENSPNAG00000028138	rab5c	98	91.244	Pygocentrus_nattereri
ENSPEMG00000017971	Rab5c	97	87.264	ENSPNAG00000002218	-	99	89.623	Pygocentrus_nattereri
ENSPEMG00000017971	Rab5c	100	99.074	ENSRNOG00000018568	Rab5c	100	99.074	Rattus_norvegicus
ENSPEMG00000017971	Rab5c	100	98.148	ENSRBIG00000031376	RAB5C	100	98.148	Rhinopithecus_bieti
ENSPEMG00000017971	Rab5c	100	98.148	ENSRROG00000032895	RAB5C	100	98.148	Rhinopithecus_roxellana
ENSPEMG00000017971	Rab5c	100	98.611	ENSSBOG00000032552	-	100	98.611	Saimiri_boliviensis_boliviensis
ENSPEMG00000017971	Rab5c	100	97.685	ENSSHAG00000005267	-	100	97.685	Sarcophilus_harrisii
ENSPEMG00000017971	Rab5c	99	87.558	ENSSFOG00015009988	-	99	87.558	Scleropages_formosus
ENSPEMG00000017971	Rab5c	96	92.308	ENSSMAG00000007323	rab5c	98	90.278	Scophthalmus_maximus
ENSPEMG00000017971	Rab5c	99	91.667	ENSSDUG00000023008	rab5c	98	91.667	Seriola_dumerili
ENSPEMG00000017971	Rab5c	99	91.204	ENSSLDG00000017771	rab5c	98	91.204	Seriola_lalandi_dorsalis
ENSPEMG00000017971	Rab5c	100	96.296	ENSSPUG00000012950	-	100	96.296	Sphenodon_punctatus
ENSPEMG00000017971	Rab5c	99	89.352	ENSSPAG00000006436	rab5c	98	92.130	Stegastes_partitus
ENSPEMG00000017971	Rab5c	100	98.148	ENSSSCG00000032467	RAB5C	100	98.148	Sus_scrofa
ENSPEMG00000017971	Rab5c	99	87.963	ENSTRUG00000015590	rab5c	98	90.278	Takifugu_rubripes
ENSPEMG00000017971	Rab5c	96	90.909	ENSTNIG00000011711	rab5c	95	90.909	Tetraodon_nigroviridis
ENSPEMG00000017971	Rab5c	100	98.148	ENSTBEG00000007092	RAB5C	100	98.148	Tupaia_belangeri
ENSPEMG00000017971	Rab5c	100	97.685	ENSTTRG00000006673	RAB5C	100	97.685	Tursiops_truncatus
ENSPEMG00000017971	Rab5c	100	98.148	ENSUAMG00000024343	RAB5C	100	98.148	Ursus_americanus
ENSPEMG00000017971	Rab5c	100	98.148	ENSUMAG00000023270	RAB5C	100	98.148	Ursus_maritimus
ENSPEMG00000017971	Rab5c	99	88.889	ENSXCOG00000016788	rab5c	98	91.667	Xiphophorus_couchianus
ENSPEMG00000017971	Rab5c	96	91.905	ENSXCOG00000006300	-	99	88.688	Xiphophorus_couchianus
ENSPEMG00000017971	Rab5c	99	90.783	ENSXMAG00000022179	-	99	90.783	Xiphophorus_maculatus
ENSPEMG00000017971	Rab5c	99	89.352	ENSXMAG00000003266	rab5c	98	91.667	Xiphophorus_maculatus