EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000018369 (Gene tree)
Gene ID: 102925442
Gene Symbol: Slbp
Alias: -
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 13126 bases
Position: chrKI615344.1:551783-564908
Accession: 102925442
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000020391	SLBP_RNA_bind	PF15247.6	5.1e-29	1	1
ENSPEMP00000020389	SLBP_RNA_bind	PF15247.6	5.8e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000024739	-	768	-	ENSPEMP00000020391	255 (aa)	-	-
ENSPEMT00000024737	-	1937	XM_006972890	ENSPEMP00000020389	275 (aa)	XP_006972952	UPI00042AA79E

Gene Model

Click here to download ENSPEMG00000018369's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000018369's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000018369	Slbp	100	86.909	ENSG00000163950	SLBP	100	86.182	Homo_sapiens
ENSPEMG00000018369	Slbp	84	50.000	ENSAPOG00000004953	slbp	90	50.584	Acanthochromis_polyacanthus
ENSPEMG00000018369	Slbp	79	94.931	ENSAMEG00000016915	SLBP	100	94.931	Ailuropoda_melanoleuca
ENSPEMG00000018369	Slbp	84	52.778	ENSACIG00000022308	slbp	95	51.210	Amphilophus_citrinellus
ENSPEMG00000018369	Slbp	90	49.248	ENSAOCG00000024545	slbp	88	49.430	Amphiprion_ocellaris
ENSPEMG00000018369	Slbp	85	49.808	ENSAPEG00000017629	slbp	88	49.430	Amphiprion_percula
ENSPEMG00000018369	Slbp	84	50.958	ENSATEG00000016358	slbp	74	57.820	Anabas_testudineus
ENSPEMG00000018369	Slbp	79	75.455	ENSAPLG00000015989	-	100	79.545	Anas_platyrhynchos
ENSPEMG00000018369	Slbp	100	84.043	ENSANAG00000034769	SLBP	100	83.333	Aotus_nancymaae
ENSPEMG00000018369	Slbp	82	52.400	ENSACLG00000007036	-	78	52.535	Astatotilapia_calliptera
ENSPEMG00000018369	Slbp	83	57.143	ENSAMXG00000014527	slbp	77	63.333	Astyanax_mexicanus
ENSPEMG00000018369	Slbp	100	85.818	ENSBTAG00000001328	SLBP	100	85.818	Bos_taurus
ENSPEMG00000018369	Slbp	100	82.624	ENSCJAG00000001790	SLBP	100	82.624	Callithrix_jacchus
ENSPEMG00000018369	Slbp	100	86.909	ENSCAFG00000015016	SLBP	100	86.909	Canis_familiaris
ENSPEMG00000018369	Slbp	100	86.909	ENSCAFG00020012334	SLBP	100	86.909	Canis_lupus_dingo
ENSPEMG00000018369	Slbp	100	85.455	ENSCHIG00000019364	SLBP	100	85.455	Capra_hircus
ENSPEMG00000018369	Slbp	100	87.636	ENSTSYG00000000376	SLBP	100	86.545	Carlito_syrichta
ENSPEMG00000018369	Slbp	66	90.055	ENSCAPG00000016340	SLBP	100	90.055	Cavia_aperea
ENSPEMG00000018369	Slbp	100	84.588	ENSCPOG00000000031	SLBP	100	84.588	Cavia_porcellus
ENSPEMG00000018369	Slbp	67	84.762	ENSCCAG00000026134	SLBP	85	82.857	Cebus_capucinus
ENSPEMG00000018369	Slbp	100	86.909	ENSCATG00000029173	SLBP	100	86.182	Cercocebus_atys
ENSPEMG00000018369	Slbp	100	85.455	ENSCLAG00000008157	SLBP	100	85.455	Chinchilla_lanigera
ENSPEMG00000018369	Slbp	100	73.571	ENSCSAG00000015628	SLBP	100	73.571	Chlorocebus_sabaeus
ENSPEMG00000018369	Slbp	93	72.901	ENSCPBG00000000746	SLBP	100	72.340	Chrysemys_picta_bellii
ENSPEMG00000018369	Slbp	79	89.815	ENSCANG00000041008	SLBP	100	88.889	Colobus_angolensis_palliatus
ENSPEMG00000018369	Slbp	100	94.182	ENSCGRG00001012991	-	100	94.182	Cricetulus_griseus_chok1gshd
ENSPEMG00000018369	Slbp	100	97.455	ENSCGRG00001009760	-	100	97.455	Cricetulus_griseus_chok1gshd
ENSPEMG00000018369	Slbp	100	97.455	ENSCGRG00000004506	Slbp	100	97.455	Cricetulus_griseus_crigri
ENSPEMG00000018369	Slbp	83	52.000	ENSCSEG00000020337	-	76	57.346	Cynoglossus_semilaevis
ENSPEMG00000018369	Slbp	71	55.288	ENSCVAG00000019592	-	76	55.610	Cyprinodon_variegatus
ENSPEMG00000018369	Slbp	84	56.098	ENSDARG00000100558	slbp	67	62.069	Danio_rerio
ENSPEMG00000018369	Slbp	100	79.152	ENSDNOG00000047539	SLBP	100	79.152	Dasypus_novemcinctus
ENSPEMG00000018369	Slbp	79	92.130	ENSDORG00000003028	Slbp	100	92.130	Dipodomys_ordii
ENSPEMG00000018369	Slbp	86	79.916	ENSETEG00000004641	SLBP	99	79.916	Echinops_telfairi
ENSPEMG00000018369	Slbp	70	93.229	ENSEASG00005022714	SLBP	100	93.229	Equus_asinus_asinus
ENSPEMG00000018369	Slbp	87	80.753	ENSECAG00000011689	SLBP	69	90.000	Equus_caballus
ENSPEMG00000018369	Slbp	87	51.515	ENSELUG00000012854	slbp	92	49.042	Esox_lucius
ENSPEMG00000018369	Slbp	100	88.364	ENSFCAG00000000169	SLBP	100	88.364	Felis_catus
ENSPEMG00000018369	Slbp	100	69.395	ENSFALG00000010003	-	100	69.039	Ficedula_albicollis
ENSPEMG00000018369	Slbp	92	90.119	ENSFDAG00000007592	SLBP	99	90.119	Fukomys_damarensis
ENSPEMG00000018369	Slbp	82	50.607	ENSFHEG00000007497	slbp	77	51.923	Fundulus_heteroclitus
ENSPEMG00000018369	Slbp	53	71.333	ENSGMOG00000015352	slbp	96	71.333	Gadus_morhua
ENSPEMG00000018369	Slbp	100	69.039	ENSGALG00000015712	SLBP	100	71.174	Gallus_gallus
ENSPEMG00000018369	Slbp	82	52.209	ENSGAFG00000019577	slbp	80	55.450	Gambusia_affinis
ENSPEMG00000018369	Slbp	71	55.072	ENSGACG00000019596	slbp	82	55.392	Gasterosteus_aculeatus
ENSPEMG00000018369	Slbp	86	68.852	ENSGAGG00000012096	SLBP	91	72.687	Gopherus_agassizii
ENSPEMG00000018369	Slbp	100	86.909	ENSGGOG00000003167	SLBP	100	86.182	Gorilla_gorilla
ENSPEMG00000018369	Slbp	82	52.174	ENSHBUG00000003338	-	78	52.535	Haplochromis_burtoni
ENSPEMG00000018369	Slbp	89	85.088	ENSHGLG00000008313	-	100	80.784	Heterocephalus_glaber_female
ENSPEMG00000018369	Slbp	100	76.000	ENSHGLG00000005955	-	100	76.000	Heterocephalus_glaber_female
ENSPEMG00000018369	Slbp	84	84.475	ENSHGLG00000010461	-	96	84.483	Heterocephalus_glaber_female
ENSPEMG00000018369	Slbp	89	85.965	ENSHGLG00100010510	-	100	81.569	Heterocephalus_glaber_male
ENSPEMG00000018369	Slbp	84	84.475	ENSHGLG00100014906	-	96	84.483	Heterocephalus_glaber_male
ENSPEMG00000018369	Slbp	100	87.273	ENSHGLG00100014018	-	100	87.273	Heterocephalus_glaber_male
ENSPEMG00000018369	Slbp	84	49.802	ENSHCOG00000013425	slbp	75	54.808	Hippocampus_comes
ENSPEMG00000018369	Slbp	70	67.172	ENSIPUG00000016780	slbp	74	67.172	Ictalurus_punctatus
ENSPEMG00000018369	Slbp	100	90.909	ENSSTOG00000003262	SLBP	100	90.909	Ictidomys_tridecemlineatus
ENSPEMG00000018369	Slbp	100	92.000	ENSJJAG00000020549	-	100	92.000	Jaculus_jaculus
ENSPEMG00000018369	Slbp	100	90.545	ENSJJAG00000002394	-	100	90.545	Jaculus_jaculus
ENSPEMG00000018369	Slbp	82	51.181	ENSKMAG00000008187	slbp	77	54.128	Kryptolebias_marmoratus
ENSPEMG00000018369	Slbp	84	51.765	ENSLBEG00000024709	slbp	76	53.333	Labrus_bergylta
ENSPEMG00000018369	Slbp	93	56.667	ENSLACG00000014623	SLBP	96	56.296	Latimeria_chalumnae
ENSPEMG00000018369	Slbp	92	51.079	ENSLOCG00000011027	slbp	93	51.079	Lepisosteus_oculatus
ENSPEMG00000018369	Slbp	86	85.185	ENSLAFG00000012933	SLBP	100	85.185	Loxodonta_africana
ENSPEMG00000018369	Slbp	91	88.048	ENSMFAG00000030130	SLBP	95	73.643	Macaca_fascicularis
ENSPEMG00000018369	Slbp	93	85.496	ENSMMUG00000032303	SLBP	96	89.401	Macaca_mulatta
ENSPEMG00000018369	Slbp	100	67.730	ENSMNEG00000008082	SLBP	100	67.021	Macaca_nemestrina
ENSPEMG00000018369	Slbp	94	79.070	ENSMLEG00000024639	SLBP	99	78.295	Mandrillus_leucophaeus
ENSPEMG00000018369	Slbp	85	47.490	ENSMAMG00000001046	-	90	47.656	Mastacembelus_armatus
ENSPEMG00000018369	Slbp	82	52.174	ENSMZEG00005017261	-	78	52.535	Maylandia_zebra
ENSPEMG00000018369	Slbp	79	76.498	ENSMGAG00000013085	SLBP	100	79.263	Meleagris_gallopavo
ENSPEMG00000018369	Slbp	100	97.818	ENSMAUG00000009490	Slbp	100	97.818	Mesocricetus_auratus
ENSPEMG00000018369	Slbp	100	86.545	ENSMICG00000014244	SLBP	100	85.455	Microcebus_murinus
ENSPEMG00000018369	Slbp	100	97.091	ENSMOCG00000015826	Slbp	99	97.091	Microtus_ochrogaster
ENSPEMG00000018369	Slbp	85	50.633	ENSMMOG00000010181	slbp	93	50.424	Mola_mola
ENSPEMG00000018369	Slbp	93	81.609	ENSMODG00000004304	SLBP	100	81.609	Monodelphis_domestica
ENSPEMG00000018369	Slbp	84	48.077	ENSMALG00000013883	-	54	55.502	Monopterus_albus
ENSPEMG00000018369	Slbp	100	95.636	MGP_CAROLIEiJ_G0027117	Slbp	100	95.636	Mus_caroli
ENSPEMG00000018369	Slbp	100	96.000	ENSMUSG00000004642	Slbp	100	96.000	Mus_musculus
ENSPEMG00000018369	Slbp	100	96.000	MGP_PahariEiJ_G0016901	Slbp	100	96.000	Mus_pahari
ENSPEMG00000018369	Slbp	100	96.000	MGP_SPRETEiJ_G0028113	Slbp	100	96.000	Mus_spretus
ENSPEMG00000018369	Slbp	67	92.391	ENSMPUG00000011139	SLBP	94	92.391	Mustela_putorius_furo
ENSPEMG00000018369	Slbp	79	88.532	ENSMLUG00000004425	SLBP	93	88.532	Myotis_lucifugus
ENSPEMG00000018369	Slbp	100	90.182	ENSNGAG00000020799	Slbp	100	90.182	Nannospalax_galili
ENSPEMG00000018369	Slbp	80	52.066	ENSNBRG00000006044	-	87	53.043	Neolamprologus_brichardi
ENSPEMG00000018369	Slbp	100	84.752	ENSNLEG00000000048	SLBP	100	84.043	Nomascus_leucogenys
ENSPEMG00000018369	Slbp	65	88.202	ENSMEUG00000002501	SLBP	100	88.202	Notamacropus_eugenii
ENSPEMG00000018369	Slbp	100	85.091	ENSODEG00000012641	SLBP	100	85.091	Octodon_degus
ENSPEMG00000018369	Slbp	82	52.569	ENSONIG00000017469	-	78	52.074	Oreochromis_niloticus
ENSPEMG00000018369	Slbp	79	83.871	ENSOANG00000014243	SLBP	95	85.714	Ornithorhynchus_anatinus
ENSPEMG00000018369	Slbp	83	51.653	ENSORLG00000024887	-	74	54.040	Oryzias_latipes
ENSPEMG00000018369	Slbp	84	51.029	ENSORLG00020007798	slbp	73	53.535	Oryzias_latipes_hni
ENSPEMG00000018369	Slbp	83	52.066	ENSORLG00015016656	slbp	73	54.545	Oryzias_latipes_hsok
ENSPEMG00000018369	Slbp	84	51.029	ENSOMEG00000010818	slbp	73	55.779	Oryzias_melastigma
ENSPEMG00000018369	Slbp	100	86.182	ENSOGAG00000009750	SLBP	100	85.455	Otolemur_garnettii
ENSPEMG00000018369	Slbp	79	91.705	ENSOARG00000016090	SLBP	100	91.705	Ovis_aries
ENSPEMG00000018369	Slbp	100	86.909	ENSPPAG00000033300	SLBP	100	86.182	Pan_paniscus
ENSPEMG00000018369	Slbp	91	90.000	ENSPPRG00000016897	SLBP	100	90.000	Panthera_pardus
ENSPEMG00000018369	Slbp	70	93.229	ENSPTIG00000015057	SLBP	100	93.229	Panthera_tigris_altaica
ENSPEMG00000018369	Slbp	100	86.545	ENSPTRG00000015832	SLBP	100	85.818	Pan_troglodytes
ENSPEMG00000018369	Slbp	100	83.099	ENSPANG00000004932	SLBP	100	82.394	Papio_anubis
ENSPEMG00000018369	Slbp	88	53.257	ENSPKIG00000006183	slbp	94	51.282	Paramormyrops_kingsleyae
ENSPEMG00000018369	Slbp	80	51.542	ENSPMGG00000017684	-	88	59.887	Periophthalmus_magnuspinnatus
ENSPEMG00000018369	Slbp	100	75.084	ENSPCIG00000013575	SLBP	86	75.084	Phascolarctos_cinereus
ENSPEMG00000018369	Slbp	82	51.613	ENSPFOG00000000462	slbp	76	55.450	Poecilia_formosa
ENSPEMG00000018369	Slbp	82	52.016	ENSPLAG00000008300	slbp	81	53.271	Poecilia_latipinna
ENSPEMG00000018369	Slbp	82	51.613	ENSPMEG00000020807	slbp	76	55.450	Poecilia_mexicana
ENSPEMG00000018369	Slbp	82	51.613	ENSPREG00000004561	slbp	76	55.450	Poecilia_reticulata
ENSPEMG00000018369	Slbp	100	87.273	ENSPPYG00000014529	SLBP	100	86.545	Pongo_abelii
ENSPEMG00000018369	Slbp	100	87.273	ENSPCOG00000017399	SLBP	100	86.182	Propithecus_coquereli
ENSPEMG00000018369	Slbp	100	80.727	ENSPVAG00000002807	SLBP	100	80.727	Pteropus_vampyrus
ENSPEMG00000018369	Slbp	82	52.174	ENSPNYG00000005451	-	78	52.535	Pundamilia_nyererei
ENSPEMG00000018369	Slbp	82	58.750	ENSPNAG00000018503	slbp	89	58.750	Pygocentrus_nattereri
ENSPEMG00000018369	Slbp	100	95.636	ENSRNOG00000037162	Slbp	100	95.636	Rattus_norvegicus
ENSPEMG00000018369	Slbp	100	86.909	ENSRBIG00000039159	SLBP	100	86.182	Rhinopithecus_bieti
ENSPEMG00000018369	Slbp	97	85.338	ENSRROG00000030081	SLBP	98	84.586	Rhinopithecus_roxellana
ENSPEMG00000018369	Slbp	70	89.583	ENSSBOG00000033897	SLBP	100	88.542	Saimiri_boliviensis_boliviensis
ENSPEMG00000018369	Slbp	100	74.916	ENSSHAG00000013939	SLBP	100	74.916	Sarcophilus_harrisii
ENSPEMG00000018369	Slbp	85	57.200	ENSSFOG00015019429	slbp	89	53.815	Scleropages_formosus
ENSPEMG00000018369	Slbp	73	51.802	ENSSMAG00000016028	-	77	52.055	Scophthalmus_maximus
ENSPEMG00000018369	Slbp	82	50.800	ENSSDUG00000000855	-	77	55.399	Seriola_dumerili
ENSPEMG00000018369	Slbp	70	42.188	ENSSLDG00000007554	-	66	42.188	Seriola_lalandi_dorsalis
ENSPEMG00000018369	Slbp	50	53.333	ENSSLDG00000022893	-	86	54.110	Seriola_lalandi_dorsalis
ENSPEMG00000018369	Slbp	92	69.412	ENSSPUG00000016007	SLBP	97	69.412	Sphenodon_punctatus
ENSPEMG00000018369	Slbp	82	51.984	ENSSPAG00000004021	slbp	80	57.212	Stegastes_partitus
ENSPEMG00000018369	Slbp	100	84.727	ENSSSCG00000008676	SLBP	100	84.727	Sus_scrofa
ENSPEMG00000018369	Slbp	93	69.732	ENSTGUG00000010626	-	100	71.648	Taeniopygia_guttata
ENSPEMG00000018369	Slbp	90	50.373	ENSTRUG00000000688	slbp	93	48.485	Takifugu_rubripes
ENSPEMG00000018369	Slbp	88	46.923	ENSTNIG00000000484	-	82	49.091	Tetraodon_nigroviridis
ENSPEMG00000018369	Slbp	68	94.118	ENSTBEG00000004085	SLBP	100	68.110	Tupaia_belangeri
ENSPEMG00000018369	Slbp	79	93.981	ENSTTRG00000010901	-	100	93.981	Tursiops_truncatus
ENSPEMG00000018369	Slbp	65	88.764	ENSTTRG00000004010	-	100	88.764	Tursiops_truncatus
ENSPEMG00000018369	Slbp	100	88.087	ENSUAMG00000012990	SLBP	100	88.087	Ursus_americanus
ENSPEMG00000018369	Slbp	70	93.229	ENSUMAG00000006119	SLBP	100	93.229	Ursus_maritimus
ENSPEMG00000018369	Slbp	100	86.182	ENSVVUG00000015578	-	100	86.182	Vulpes_vulpes
ENSPEMG00000018369	Slbp	98	53.986	ENSXETG00000003876	slbp	97	56.985	Xenopus_tropicalis
ENSPEMG00000018369	Slbp	72	55.093	ENSXCOG00000008275	slbp	81	55.399	Xiphophorus_couchianus
ENSPEMG00000018369	Slbp	82	51.613	ENSXMAG00000001331	-	75	55.450	Xiphophorus_maculatus