EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000018421 (Gene tree)
Gene ID: 102921571
Gene Symbol: Rrp1
Alias: -
Full Name: ribosomal RNA processing 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 12315 bases
Position: chrKI615734.1:1272626-1284940
Accession: 102921571
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000020470	Nop52	PF05997.12	2.2e-69	1	1
ENSPEMP00000020475	Nop52	PF05997.12	2.4e-69	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000024818	-	1742	XM_006989452	ENSPEMP00000020470	439 (aa)	XP_006989514	UPI00042AABDF
ENSPEMT00000024823	-	1326	-	ENSPEMP00000020475	441 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000018421's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000018421's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000018421	Rrp1	91	76.250	ENSG00000160214	RRP1	98	88.636	Homo_sapiens
ENSPEMG00000018421	Rrp1	99	65.859	ENSAMEG00000011448	RRP1	87	68.148	Ailuropoda_melanoleuca
ENSPEMG00000018421	Rrp1	67	47.000	ENSACIG00000019121	rrp1	57	48.582	Amphilophus_citrinellus
ENSPEMG00000018421	Rrp1	77	52.507	ENSAOCG00000017894	-	75	50.437	Amphiprion_ocellaris
ENSPEMG00000018421	Rrp1	85	50.131	ENSACAG00000017851	RRP1B	52	49.879	Anolis_carolinensis
ENSPEMG00000018421	Rrp1	77	79.228	ENSANAG00000037815	RRP1	85	72.388	Aotus_nancymaae
ENSPEMG00000018421	Rrp1	99	63.453	ENSBTAG00000003981	RRP1	94	63.594	Bos_taurus
ENSPEMG00000018421	Rrp1	87	76.546	ENSCJAG00000043205	RRP1	81	75.622	Callithrix_jacchus
ENSPEMG00000018421	Rrp1	98	66.009	ENSCAFG00000010646	RRP1	97	67.338	Canis_familiaris
ENSPEMG00000018421	Rrp1	98	66.009	ENSCAFG00020018979	RRP1	97	67.338	Canis_lupus_dingo
ENSPEMG00000018421	Rrp1	99	64.430	ENSCHIG00000020948	RRP1	94	64.237	Capra_hircus
ENSPEMG00000018421	Rrp1	100	63.462	ENSTSYG00000012831	RRP1	100	63.931	Carlito_syrichta
ENSPEMG00000018421	Rrp1	88	59.806	ENSCAPG00000008576	RRP1	83	68.882	Cavia_aperea
ENSPEMG00000018421	Rrp1	88	44.924	ENSCPOG00000002396	RRP1B	56	42.686	Cavia_porcellus
ENSPEMG00000018421	Rrp1	99	65.646	ENSCPOG00000038986	RRP1	93	65.919	Cavia_porcellus
ENSPEMG00000018421	Rrp1	91	75.622	ENSCCAG00000029828	RRP1	86	75.062	Cebus_capucinus
ENSPEMG00000018421	Rrp1	82	48.404	ENSCCAG00000029384	RRP1B	51	50.872	Cebus_capucinus
ENSPEMG00000018421	Rrp1	91	74.185	ENSCATG00000015632	RRP1	85	75.250	Cercocebus_atys
ENSPEMG00000018421	Rrp1	99	70.330	ENSCLAG00000011639	RRP1	99	68.722	Chinchilla_lanigera
ENSPEMG00000018421	Rrp1	75	78.550	ENSCSAG00000007936	RRP1	100	76.946	Chlorocebus_sabaeus
ENSPEMG00000018421	Rrp1	76	42.105	ENSCHOG00000002426	-	55	41.691	Choloepus_hoffmanni
ENSPEMG00000018421	Rrp1	77	59.357	ENSCPBG00000010310	RRP1B	50	48.700	Chrysemys_picta_bellii
ENSPEMG00000018421	Rrp1	76	35.380	ENSCING00000003304	-	73	34.503	Ciona_intestinalis
ENSPEMG00000018421	Rrp1	89	65.743	ENSCANG00000042611	RRP1	84	64.962	Colobus_angolensis_palliatus
ENSPEMG00000018421	Rrp1	100	89.569	ENSCGRG00001011920	Rrp1	100	88.662	Cricetulus_griseus_chok1gshd
ENSPEMG00000018421	Rrp1	74	50.893	ENSCGRG00001023882	-	55	69.841	Cricetulus_griseus_chok1gshd
ENSPEMG00000018421	Rrp1	100	89.569	ENSCGRG00000008915	Rrp1	100	88.662	Cricetulus_griseus_crigri
ENSPEMG00000018421	Rrp1	82	49.319	ENSCSEG00000020711	-	64	49.709	Cynoglossus_semilaevis
ENSPEMG00000018421	Rrp1	79	47.839	ENSCVAG00000017568	-	88	47.839	Cyprinodon_variegatus
ENSPEMG00000018421	Rrp1	99	63.100	ENSDNOG00000019880	RRP1	93	63.825	Dasypus_novemcinctus
ENSPEMG00000018421	Rrp1	88	68.627	ENSDORG00000002104	Rrp1	99	67.157	Dipodomys_ordii
ENSPEMG00000018421	Rrp1	75	60.671	ENSETEG00000002963	-	73	60.366	Echinops_telfairi
ENSPEMG00000018421	Rrp1	97	67.500	ENSEASG00005001673	RRP1	90	70.000	Equus_asinus_asinus
ENSPEMG00000018421	Rrp1	97	67.500	ENSECAG00000015703	RRP1	90	70.250	Equus_caballus
ENSPEMG00000018421	Rrp1	91	42.353	ENSELUG00000015885	-	87	50.625	Esox_lucius
ENSPEMG00000018421	Rrp1	93	70.270	ENSFCAG00000008434	RRP1	88	69.900	Felis_catus
ENSPEMG00000018421	Rrp1	99	67.188	ENSFDAG00000013728	RRP1	99	66.147	Fukomys_damarensis
ENSPEMG00000018421	Rrp1	87	54.242	ENSGALG00000035696	RRP1B	53	52.970	Gallus_gallus
ENSPEMG00000018421	Rrp1	90	39.387	ENSGACG00000001438	rrp1	52	49.258	Gasterosteus_aculeatus
ENSPEMG00000018421	Rrp1	79	58.621	ENSGAGG00000000375	RRP1B	53	53.317	Gopherus_agassizii
ENSPEMG00000018421	Rrp1	91	75.750	ENSGGOG00000000173	RRP1	85	74.938	Gorilla_gorilla
ENSPEMG00000018421	Rrp1	77	48.276	ENSHBUG00000003766	-	50	46.272	Haplochromis_burtoni
ENSPEMG00000018421	Rrp1	99	66.593	ENSHGLG00000017085	RRP1	95	65.632	Heterocephalus_glaber_female
ENSPEMG00000018421	Rrp1	81	48.901	ENSHGLG00000004968	RRP1B	59	46.437	Heterocephalus_glaber_female
ENSPEMG00000018421	Rrp1	81	44.134	ENSIPUG00000000673	-	73	41.089	Ictalurus_punctatus
ENSPEMG00000018421	Rrp1	95	69.860	ENSSTOG00000011116	RRP1	91	72.250	Ictidomys_tridecemlineatus
ENSPEMG00000018421	Rrp1	100	77.477	ENSJJAG00000018886	Rrp1	100	75.169	Jaculus_jaculus
ENSPEMG00000018421	Rrp1	75	48.571	ENSKMAG00000005539	rrp1	51	48.127	Kryptolebias_marmoratus
ENSPEMG00000018421	Rrp1	77	47.472	ENSLBEG00000021417	RRP1	89	47.486	Labrus_bergylta
ENSPEMG00000018421	Rrp1	99	61.883	ENSLAFG00000022901	RRP1	99	60.497	Loxodonta_africana
ENSPEMG00000018421	Rrp1	93	49.169	ENSLAFG00000000766	RRP1B	96	49.140	Loxodonta_africana
ENSPEMG00000018421	Rrp1	99	68.670	ENSMFAG00000003202	RRP1	85	75.000	Macaca_fascicularis
ENSPEMG00000018421	Rrp1	99	68.455	ENSMMUG00000012304	RRP1	85	73.449	Macaca_mulatta
ENSPEMG00000018421	Rrp1	99	68.455	ENSMNEG00000031210	RRP1	85	74.750	Macaca_nemestrina
ENSPEMG00000018421	Rrp1	82	73.684	ENSMLEG00000037797	RRP1	84	73.684	Mandrillus_leucophaeus
ENSPEMG00000018421	Rrp1	100	75.169	ENSMAUG00000017653	Rrp1	100	74.550	Mesocricetus_auratus
ENSPEMG00000018421	Rrp1	100	69.042	ENSMICG00000004700	RRP1	100	68.315	Microcebus_murinus
ENSPEMG00000018421	Rrp1	100	71.975	ENSMOCG00000015687	Rrp1	100	73.036	Microtus_ochrogaster
ENSPEMG00000018421	Rrp1	81	44.044	ENSMMOG00000019175	rrp1	86	44.928	Mola_mola
ENSPEMG00000018421	Rrp1	78	58.427	ENSMODG00000021036	-	52	58.840	Monodelphis_domestica
ENSPEMG00000018421	Rrp1	77	49.708	ENSMALG00000010310	rrp1	88	49.708	Monopterus_albus
ENSPEMG00000018421	Rrp1	98	73.566	MGP_CAROLIEiJ_G0015508	Rrp1	82	89.879	Mus_caroli
ENSPEMG00000018421	Rrp1	74	49.091	MGP_CAROLIEiJ_G0021376	Rrp1b	53	66.667	Mus_caroli
ENSPEMG00000018421	Rrp1	74	50.000	ENSMUSG00000058392	Rrp1b	53	68.254	Mus_musculus
ENSPEMG00000018421	Rrp1	97	74.174	ENSMUSG00000061032	Rrp1	98	72.131	Mus_musculus
ENSPEMG00000018421	Rrp1	99	73.992	MGP_PahariEiJ_G0030921	Rrp1	90	90.244	Mus_pahari
ENSPEMG00000018421	Rrp1	75	49.547	MGP_PahariEiJ_G0023695	Rrp1b	53	66.667	Mus_pahari
ENSPEMG00000018421	Rrp1	98	88.800	MGP_SPRETEiJ_G0016321	Rrp1	98	71.311	Mus_spretus
ENSPEMG00000018421	Rrp1	75	50.453	MGP_SPRETEiJ_G0022290	Rrp1b	53	68.254	Mus_spretus
ENSPEMG00000018421	Rrp1	88	64.853	ENSMPUG00000009826	RRP1	93	62.637	Mustela_putorius_furo
ENSPEMG00000018421	Rrp1	98	58.233	ENSMLUG00000017788	RRP1	90	62.418	Myotis_lucifugus
ENSPEMG00000018421	Rrp1	100	60.294	ENSNGAG00000022344	Rrp1	99	60.677	Nannospalax_galili
ENSPEMG00000018421	Rrp1	70	39.550	ENSNBRG00000021980	-	72	40.000	Neolamprologus_brichardi
ENSPEMG00000018421	Rrp1	91	74.250	ENSNLEG00000034734	RRP1	85	73.449	Nomascus_leucogenys
ENSPEMG00000018421	Rrp1	82	65.470	ENSOPRG00000001319	RRP1	97	65.722	Ochotona_princeps
ENSPEMG00000018421	Rrp1	77	46.221	ENSONIG00000004264	rrp1	50	44.565	Oreochromis_niloticus
ENSPEMG00000018421	Rrp1	75	60.725	ENSOANG00000006472	-	98	52.800	Ornithorhynchus_anatinus
ENSPEMG00000018421	Rrp1	69	78.808	ENSOCUG00000022843	-	99	52.683	Oryctolagus_cuniculus
ENSPEMG00000018421	Rrp1	87	42.365	ENSOMEG00000016910	-	51	41.289	Oryzias_melastigma
ENSPEMG00000018421	Rrp1	75	51.662	ENSOGAG00000009872	RRP1B	60	47.355	Otolemur_garnettii
ENSPEMG00000018421	Rrp1	88	71.827	ENSOGAG00000006105	RRP1	87	72.081	Otolemur_garnettii
ENSPEMG00000018421	Rrp1	99	60.714	ENSOARG00000011434	RRP1	94	62.156	Ovis_aries
ENSPEMG00000018421	Rrp1	91	76.000	ENSPPAG00000029050	RRP1	85	75.186	Pan_paniscus
ENSPEMG00000018421	Rrp1	93	70.270	ENSPPRG00000010656	RRP1	79	75.071	Panthera_pardus
ENSPEMG00000018421	Rrp1	83	58.021	ENSPTIG00000019473	RRP1	71	62.300	Panthera_tigris_altaica
ENSPEMG00000018421	Rrp1	72	50.303	ENSPTIG00000016894	RRP1B	50	51.827	Panthera_tigris_altaica
ENSPEMG00000018421	Rrp1	91	75.750	ENSPTRG00000013962	RRP1	85	74.938	Pan_troglodytes
ENSPEMG00000018421	Rrp1	91	73.684	ENSPANG00000015097	RRP1	85	74.750	Papio_anubis
ENSPEMG00000018421	Rrp1	77	40.341	ENSPMGG00000007512	-	84	40.625	Periophthalmus_magnuspinnatus
ENSPEMG00000018421	Rrp1	90	55.831	ENSPCIG00000015523	-	86	52.058	Phascolarctos_cinereus
ENSPEMG00000018421	Rrp1	91	75.000	ENSPPYG00000011474	RRP1	85	74.194	Pongo_abelii
ENSPEMG00000018421	Rrp1	82	53.760	ENSPCAG00000008370	-	95	54.237	Procavia_capensis
ENSPEMG00000018421	Rrp1	99	68.080	ENSPCOG00000017706	RRP1	99	66.518	Propithecus_coquereli
ENSPEMG00000018421	Rrp1	82	57.857	ENSPVAG00000009925	-	82	57.857	Pteropus_vampyrus
ENSPEMG00000018421	Rrp1	100	81.166	ENSRNOG00000001203	Rrp1	100	80.717	Rattus_norvegicus
ENSPEMG00000018421	Rrp1	91	73.684	ENSRBIG00000032082	RRP1	85	73.697	Rhinopithecus_bieti
ENSPEMG00000018421	Rrp1	99	66.667	ENSRROG00000039799	RRP1	85	73.697	Rhinopithecus_roxellana
ENSPEMG00000018421	Rrp1	91	73.618	ENSSBOG00000034689	RRP1	95	68.037	Saimiri_boliviensis_boliviensis
ENSPEMG00000018421	Rrp1	75	56.364	ENSSHAG00000010304	-	93	57.655	Sarcophilus_harrisii
ENSPEMG00000018421	Rrp1	70	45.455	ENSSFOG00015003932	-	51	44.411	Scleropages_formosus
ENSPEMG00000018421	Rrp1	77	50.000	ENSSMAG00000016847	-	84	49.128	Scophthalmus_maximus
ENSPEMG00000018421	Rrp1	81	51.791	ENSSSCG00000021698	RRP1B	51	52.493	Sus_scrofa
ENSPEMG00000018421	Rrp1	88	69.231	ENSSSCG00000037061	RRP1	89	67.980	Sus_scrofa
ENSPEMG00000018421	Rrp1	77	49.429	ENSTRUG00000017592	rrp1	97	49.429	Takifugu_rubripes
ENSPEMG00000018421	Rrp1	91	43.427	ENSTNIG00000005053	rrp1	54	49.133	Tetraodon_nigroviridis
ENSPEMG00000018421	Rrp1	62	74.497	ENSTBEG00000001260	-	56	74.820	Tupaia_belangeri
ENSPEMG00000018421	Rrp1	79	45.730	ENSTBEG00000000422	RRP1B	51	49.834	Tupaia_belangeri
ENSPEMG00000018421	Rrp1	73	73.529	ENSTTRG00000011162	RRP1	71	73.529	Tursiops_truncatus
ENSPEMG00000018421	Rrp1	72	58.631	ENSUAMG00000014189	-	81	63.082	Ursus_americanus
ENSPEMG00000018421	Rrp1	77	49.570	ENSUMAG00000025510	RRP1B	57	51.485	Ursus_maritimus
ENSPEMG00000018421	Rrp1	90	64.806	ENSUMAG00000025507	RRP1	100	61.869	Ursus_maritimus
ENSPEMG00000018421	Rrp1	68	56.522	ENSVVUG00000024498	-	66	61.049	Vulpes_vulpes