EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000018439 (Gene tree)
Gene ID: 102904360
Gene Symbol: Parn
Alias: -
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 165188 bases
Position: chrKI615529.1:874351-1039538
Accession: 102904360
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000020512	R3H	PF01424.22	3.5e-07	1	1
ENSPEMP00000020510	R3H	PF01424.22	3.7e-07	1	1
ENSPEMP00000020510	RNA_bind	PF08675.11	1.6e-33	1	1
ENSPEMP00000020512	RNA_bind	PF08675.11	1.7e-33	1	1
ENSPEMP00000020510	CAF1	PF04857.20	7.7e-81	1	1
ENSPEMP00000020512	CAF1	PF04857.20	4.1e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000024860	-	1815	XM_016002394	ENSPEMP00000020512	604 (aa)	XP_015857880	UPI00042AA7DB
ENSPEMT00000024858	-	1872	-	ENSPEMP00000020510	623 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000018439's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000018439's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000018439	Parn	100	83.881	ENSG00000140694	PARN	100	94.915	Homo_sapiens
ENSPEMG00000018439	Parn	100	83.099	ENSAMEG00000011208	PARN	100	83.099	Ailuropoda_melanoleuca
ENSPEMG00000018439	Parn	84	72.150	ENSACIG00000000619	parn	83	72.150	Amphilophus_citrinellus
ENSPEMG00000018439	Parn	91	70.639	ENSAOCG00000003465	parn	83	70.639	Amphiprion_ocellaris
ENSPEMG00000018439	Parn	74	74.153	ENSAPEG00000010661	parn	91	74.153	Amphiprion_percula
ENSPEMG00000018439	Parn	90	72.870	ENSATEG00000004661	parn	83	72.870	Anabas_testudineus
ENSPEMG00000018439	Parn	99	76.619	ENSAPLG00000013914	PARN	99	77.251	Anas_platyrhynchos
ENSPEMG00000018439	Parn	100	71.951	ENSACAG00000004973	PARN	100	73.733	Anolis_carolinensis
ENSPEMG00000018439	Parn	100	82.473	ENSANAG00000031516	PARN	100	94.915	Aotus_nancymaae
ENSPEMG00000018439	Parn	91	71.626	ENSACLG00000004742	parn	84	71.626	Astatotilapia_calliptera
ENSPEMG00000018439	Parn	92	69.707	ENSAMXG00000012390	parn	94	67.814	Astyanax_mexicanus
ENSPEMG00000018439	Parn	100	85.460	ENSBTAG00000018097	PARN	100	85.460	Bos_taurus
ENSPEMG00000018439	Parn	100	83.255	ENSCJAG00000015866	PARN	100	94.915	Callithrix_jacchus
ENSPEMG00000018439	Parn	100	82.915	ENSCAFG00000018795	PARN	100	82.915	Canis_familiaris
ENSPEMG00000018439	Parn	100	83.229	ENSCAFG00020024126	PARN	100	83.229	Canis_lupus_dingo
ENSPEMG00000018439	Parn	100	83.699	ENSCHIG00000018143	PARN	100	83.699	Capra_hircus
ENSPEMG00000018439	Parn	73	59.052	ENSCAPG00000007984	PARN	78	59.052	Cavia_aperea
ENSPEMG00000018439	Parn	100	82.316	ENSCPOG00000002263	PARN	100	82.316	Cavia_porcellus
ENSPEMG00000018439	Parn	100	83.255	ENSCCAG00000030367	PARN	100	94.915	Cebus_capucinus
ENSPEMG00000018439	Parn	100	77.373	ENSCATG00000041368	PARN	100	94.915	Cercocebus_atys
ENSPEMG00000018439	Parn	100	82.316	ENSCLAG00000015406	PARN	100	81.877	Chinchilla_lanigera
ENSPEMG00000018439	Parn	100	83.725	ENSCSAG00000008142	PARN	100	83.725	Chlorocebus_sabaeus
ENSPEMG00000018439	Parn	99	68.938	ENSCHOG00000007014	PARN	100	68.938	Choloepus_hoffmanni
ENSPEMG00000018439	Parn	85	79.228	ENSCPBG00000006609	PARN	94	79.423	Chrysemys_picta_bellii
ENSPEMG00000018439	Parn	81	43.715	ENSCING00000010142	-	99	43.421	Ciona_intestinalis
ENSPEMG00000018439	Parn	100	73.435	ENSCANG00000028849	-	100	94.915	Colobus_angolensis_palliatus
ENSPEMG00000018439	Parn	100	92.160	ENSCGRG00001012096	Parn	100	92.160	Cricetulus_griseus_chok1gshd
ENSPEMG00000018439	Parn	100	92.160	ENSCGRG00000004939	Parn	100	92.160	Cricetulus_griseus_crigri
ENSPEMG00000018439	Parn	90	69.527	ENSCSEG00000002064	parn	100	60.909	Cynoglossus_semilaevis
ENSPEMG00000018439	Parn	91	71.181	ENSCVAG00000014848	parn	83	71.181	Cyprinodon_variegatus
ENSPEMG00000018439	Parn	100	61.574	ENSDARG00000102634	parn	100	73.034	Danio_rerio
ENSPEMG00000018439	Parn	100	83.699	ENSDNOG00000000833	PARN	100	83.699	Dasypus_novemcinctus
ENSPEMG00000018439	Parn	77	85.932	ENSETEG00000014828	-	69	85.932	Echinops_telfairi
ENSPEMG00000018439	Parn	100	83.542	ENSEASG00005011400	PARN	100	83.542	Equus_asinus_asinus
ENSPEMG00000018439	Parn	100	83.699	ENSECAG00000017792	PARN	100	83.699	Equus_caballus
ENSPEMG00000018439	Parn	89	76.018	ENSEEUG00000010370	PARN	86	76.018	Erinaceus_europaeus
ENSPEMG00000018439	Parn	89	70.370	ENSELUG00000013139	parn	74	70.370	Esox_lucius
ENSPEMG00000018439	Parn	100	83.699	ENSFCAG00000044961	PARN	100	94.915	Felis_catus
ENSPEMG00000018439	Parn	99	76.070	ENSFALG00000003911	PARN	98	76.704	Ficedula_albicollis
ENSPEMG00000018439	Parn	100	83.099	ENSFDAG00000009234	PARN	100	83.099	Fukomys_damarensis
ENSPEMG00000018439	Parn	98	60.781	ENSFHEG00000013738	parn	92	74.576	Fundulus_heteroclitus
ENSPEMG00000018439	Parn	84	73.221	ENSGMOG00000003231	parn	97	73.221	Gadus_morhua
ENSPEMG00000018439	Parn	100	75.705	ENSGALG00000003091	PARN	100	76.332	Gallus_gallus
ENSPEMG00000018439	Parn	90	71.080	ENSGAFG00000011061	parn	83	70.812	Gambusia_affinis
ENSPEMG00000018439	Parn	90	70.280	ENSGACG00000019501	parn	100	66.195	Gasterosteus_aculeatus
ENSPEMG00000018439	Parn	53	76.923	ENSGAGG00000023281	PARN	83	76.923	Gopherus_agassizii
ENSPEMG00000018439	Parn	97	84.219	ENSGGOG00000025224	PARN	100	94.915	Gorilla_gorilla
ENSPEMG00000018439	Parn	91	71.626	ENSHBUG00000017906	parn	90	73.507	Haplochromis_burtoni
ENSPEMG00000018439	Parn	100	83.099	ENSHGLG00000010886	PARN	100	83.099	Heterocephalus_glaber_female
ENSPEMG00000018439	Parn	100	83.099	ENSHGLG00100014659	PARN	100	83.099	Heterocephalus_glaber_male
ENSPEMG00000018439	Parn	85	69.259	ENSHCOG00000008683	parn	92	69.259	Hippocampus_comes
ENSPEMG00000018439	Parn	89	60.106	ENSIPUG00000012401	parn	84	60.106	Ictalurus_punctatus
ENSPEMG00000018439	Parn	100	83.229	ENSSTOG00000007519	PARN	100	83.229	Ictidomys_tridecemlineatus
ENSPEMG00000018439	Parn	100	85.103	ENSJJAG00000023049	Parn	100	85.103	Jaculus_jaculus
ENSPEMG00000018439	Parn	91	71.107	ENSKMAG00000009462	parn	83	71.107	Kryptolebias_marmoratus
ENSPEMG00000018439	Parn	91	71.528	ENSLBEG00000009167	parn	89	71.528	Labrus_bergylta
ENSPEMG00000018439	Parn	79	74.354	ENSLACG00000004207	PARN	100	72.104	Latimeria_chalumnae
ENSPEMG00000018439	Parn	92	72.556	ENSLOCG00000000715	parn	85	72.556	Lepisosteus_oculatus
ENSPEMG00000018439	Parn	100	83.994	ENSLAFG00000015036	PARN	100	83.994	Loxodonta_africana
ENSPEMG00000018439	Parn	100	78.750	ENSMFAG00000044852	PARN	100	94.915	Macaca_fascicularis
ENSPEMG00000018439	Parn	100	83.412	ENSMMUG00000018849	PARN	100	94.915	Macaca_mulatta
ENSPEMG00000018439	Parn	100	83.568	ENSMNEG00000045108	PARN	100	94.915	Macaca_nemestrina
ENSPEMG00000018439	Parn	100	83.725	ENSMLEG00000031743	PARN	100	94.915	Mandrillus_leucophaeus
ENSPEMG00000018439	Parn	90	71.280	ENSMAMG00000006939	parn	82	71.280	Mastacembelus_armatus
ENSPEMG00000018439	Parn	91	71.626	ENSMZEG00005013590	parn	95	69.965	Maylandia_zebra
ENSPEMG00000018439	Parn	95	76.480	ENSMGAG00000001004	PARN	95	76.480	Meleagris_gallopavo
ENSPEMG00000018439	Parn	54	33.784	ENSMAUG00000012298	Pnldc1	70	33.784	Mesocricetus_auratus
ENSPEMG00000018439	Parn	100	85.782	ENSMAUG00000008025	Parn	100	85.782	Mesocricetus_auratus
ENSPEMG00000018439	Parn	100	84.639	ENSMICG00000016053	PARN	100	96.610	Microcebus_murinus
ENSPEMG00000018439	Parn	78	93.018	ENSMOCG00000022211	Parn	100	93.018	Microtus_ochrogaster
ENSPEMG00000018439	Parn	100	64.465	ENSMMOG00000011333	parn	87	72.285	Mola_mola
ENSPEMG00000018439	Parn	78	86.492	ENSMODG00000004915	PARN	99	86.492	Monodelphis_domestica
ENSPEMG00000018439	Parn	84	74.813	ENSMALG00000019426	parn	91	74.813	Monopterus_albus
ENSPEMG00000018439	Parn	100	89.904	MGP_CAROLIEiJ_G0020466	Parn	100	89.904	Mus_caroli
ENSPEMG00000018439	Parn	100	90.224	ENSMUSG00000022685	Parn	100	96.341	Mus_musculus
ENSPEMG00000018439	Parn	100	90.064	MGP_PahariEiJ_G0016172	Parn	100	90.064	Mus_pahari
ENSPEMG00000018439	Parn	100	90.224	MGP_SPRETEiJ_G0021361	Parn	100	90.224	Mus_spretus
ENSPEMG00000018439	Parn	100	83.386	ENSMPUG00000014464	PARN	100	83.386	Mustela_putorius_furo
ENSPEMG00000018439	Parn	78	86.032	ENSMLUG00000005414	PARN	100	86.032	Myotis_lucifugus
ENSPEMG00000018439	Parn	84	72.608	ENSNBRG00000006805	parn	90	72.608	Neolamprologus_brichardi
ENSPEMG00000018439	Parn	100	83.725	ENSNLEG00000010241	PARN	100	94.915	Nomascus_leucogenys
ENSPEMG00000018439	Parn	91	69.167	ENSMEUG00000008178	-	91	69.167	Notamacropus_eugenii
ENSPEMG00000018439	Parn	99	78.922	ENSOPRG00000012187	PARN	100	78.922	Ochotona_princeps
ENSPEMG00000018439	Parn	100	75.868	ENSODEG00000001617	PARN	100	75.868	Octodon_degus
ENSPEMG00000018439	Parn	100	66.615	ENSONIG00000000151	parn	100	66.615	Oreochromis_niloticus
ENSPEMG00000018439	Parn	58	76.944	ENSOANG00000020155	-	96	75.532	Ornithorhynchus_anatinus
ENSPEMG00000018439	Parn	99	82.992	ENSOCUG00000000322	PARN	100	82.992	Oryctolagus_cuniculus
ENSPEMG00000018439	Parn	91	71.007	ENSORLG00020010313	parn	85	71.007	Oryzias_latipes_hni
ENSPEMG00000018439	Parn	91	71.181	ENSORLG00015000300	parn	85	71.181	Oryzias_latipes_hsok
ENSPEMG00000018439	Parn	91	71.181	ENSOMEG00000019555	parn	97	64.384	Oryzias_melastigma
ENSPEMG00000018439	Parn	78	86.558	ENSOGAG00000014626	PARN	100	86.558	Otolemur_garnettii
ENSPEMG00000018439	Parn	78	88.866	ENSOARG00000007574	PARN	100	88.866	Ovis_aries
ENSPEMG00000018439	Parn	100	83.568	ENSPPAG00000031438	PARN	100	94.915	Pan_paniscus
ENSPEMG00000018439	Parn	100	83.542	ENSPPRG00000018583	PARN	100	94.915	Panthera_pardus
ENSPEMG00000018439	Parn	100	83.542	ENSPTIG00000012135	PARN	100	94.915	Panthera_tigris_altaica
ENSPEMG00000018439	Parn	100	83.568	ENSPTRG00000007792	PARN	100	94.915	Pan_troglodytes
ENSPEMG00000018439	Parn	100	80.438	ENSPANG00000020099	PARN	100	94.915	Papio_anubis
ENSPEMG00000018439	Parn	91	72.028	ENSPKIG00000022807	parn	91	67.185	Paramormyrops_kingsleyae
ENSPEMG00000018439	Parn	95	78.512	ENSPSIG00000014804	PARN	100	76.083	Pelodiscus_sinensis
ENSPEMG00000018439	Parn	81	73.633	ENSPMGG00000014431	parn	77	69.589	Periophthalmus_magnuspinnatus
ENSPEMG00000018439	Parn	81	63.566	ENSPMAG00000003956	parn	98	63.566	Petromyzon_marinus
ENSPEMG00000018439	Parn	66	77.778	ENSPCIG00000001259	PARN	91	91.525	Phascolarctos_cinereus
ENSPEMG00000018439	Parn	90	71.329	ENSPFOG00000012823	parn	83	71.057	Poecilia_formosa
ENSPEMG00000018439	Parn	90	71.503	ENSPLAG00000006395	parn	83	71.231	Poecilia_latipinna
ENSPEMG00000018439	Parn	90	71.503	ENSPMEG00000007711	parn	83	71.231	Poecilia_mexicana
ENSPEMG00000018439	Parn	90	71.154	ENSPREG00000000147	parn	83	70.884	Poecilia_reticulata
ENSPEMG00000018439	Parn	100	83.307	ENSPPYG00000007123	PARN	100	83.307	Pongo_abelii
ENSPEMG00000018439	Parn	95	74.876	ENSPCAG00000001741	PARN	100	74.876	Procavia_capensis
ENSPEMG00000018439	Parn	100	82.132	ENSPCOG00000019292	PARN	100	96.610	Propithecus_coquereli
ENSPEMG00000018439	Parn	99	79.081	ENSPVAG00000002547	PARN	100	79.081	Pteropus_vampyrus
ENSPEMG00000018439	Parn	91	71.626	ENSPNYG00000006835	parn	95	70.179	Pundamilia_nyererei
ENSPEMG00000018439	Parn	85	69.720	ENSPNAG00000018905	parn	86	69.720	Pygocentrus_nattereri
ENSPEMG00000018439	Parn	100	87.850	ENSRNOG00000002912	Parn	100	93.069	Rattus_norvegicus
ENSPEMG00000018439	Parn	54	81.982	ENSRBIG00000018726	PARN	100	81.982	Rhinopithecus_bieti
ENSPEMG00000018439	Parn	54	81.982	ENSRROG00000011162	-	100	81.982	Rhinopithecus_roxellana
ENSPEMG00000018439	Parn	100	81.690	ENSSBOG00000034726	PARN	100	94.915	Saimiri_boliviensis_boliviensis
ENSPEMG00000018439	Parn	63	30.024	ENSSHAG00000015192	PNLDC1	67	30.476	Sarcophilus_harrisii
ENSPEMG00000018439	Parn	66	84.450	ENSSHAG00000008493	PARN	94	84.450	Sarcophilus_harrisii
ENSPEMG00000018439	Parn	99	68.362	ENSSFOG00015014165	parn	94	71.007	Scleropages_formosus
ENSPEMG00000018439	Parn	100	60.436	ENSSMAG00000000685	parn	100	60.592	Scophthalmus_maximus
ENSPEMG00000018439	Parn	90	71.007	ENSSDUG00000014555	parn	83	71.007	Seriola_dumerili
ENSPEMG00000018439	Parn	81	87.097	ENSSARG00000014339	PARN	89	87.097	Sorex_araneus
ENSPEMG00000018439	Parn	100	77.586	ENSSPUG00000007719	PARN	100	77.586	Sphenodon_punctatus
ENSPEMG00000018439	Parn	91	72.021	ENSSPAG00000007095	parn	89	68.638	Stegastes_partitus
ENSPEMG00000018439	Parn	100	83.229	ENSSSCG00000007878	PARN	89	83.229	Sus_scrofa
ENSPEMG00000018439	Parn	99	75.829	ENSTGUG00000004971	PARN	99	76.461	Taeniopygia_guttata
ENSPEMG00000018439	Parn	55	31.445	ENSTGUG00000011418	PNLDC1	69	31.445	Taeniopygia_guttata
ENSPEMG00000018439	Parn	100	65.987	ENSTNIG00000008252	parn	100	66.144	Tetraodon_nigroviridis
ENSPEMG00000018439	Parn	91	70.639	ENSTBEG00000010407	PARN	100	70.639	Tupaia_belangeri
ENSPEMG00000018439	Parn	99	78.130	ENSTTRG00000002843	PARN	100	78.130	Tursiops_truncatus
ENSPEMG00000018439	Parn	74	70.299	ENSUAMG00000008283	PARN	94	72.936	Ursus_americanus
ENSPEMG00000018439	Parn	100	83.386	ENSUMAG00000004527	PARN	100	83.386	Ursus_maritimus
ENSPEMG00000018439	Parn	96	83.007	ENSVPAG00000008968	PARN	99	83.007	Vicugna_pacos
ENSPEMG00000018439	Parn	100	83.229	ENSVVUG00000019509	PARN	100	83.229	Vulpes_vulpes
ENSPEMG00000018439	Parn	100	70.110	ENSXETG00000010994	parn	100	78.095	Xenopus_tropicalis
ENSPEMG00000018439	Parn	90	67.188	ENSXCOG00000015990	parn	96	66.954	Xiphophorus_couchianus
ENSPEMG00000018439	Parn	91	70.224	ENSXMAG00000014783	parn	83	70.224	Xiphophorus_maculatus