EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000018767 (Gene tree)
Gene ID: 102903119
Gene Symbol: Synj1
Alias: -
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 79812 bases
Position: chrKI615516.1:1047562-1127373
Accession: 102903119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000020992	Exo_endo_phos	PF03372.23	5.3e-15	1	1
ENSPEMP00000020989	Exo_endo_phos	PF03372.23	1.3e-07	1	1
ENSPEMP00000020992	DUF1866	PF08952.11	3.4e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000025346	-	4281	XM_016002078	ENSPEMP00000020992	1308 (aa)	XP_015857564	-
ENSPEMT00000025343	-	6953	-	ENSPEMP00000020989	693 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000018767's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000018767's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000018767	Synj1	100	55.758	ENSPEMG00000006247	Synj2	91	60.208

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000018767	Synj1	100	96.970	ENSG00000159082	SYNJ1	100	96.629	Homo_sapiens
ENSPEMG00000018767	Synj1	100	83.597	ENSAPOG00000002809	synj1	97	69.665	Acanthochromis_polyacanthus
ENSPEMG00000018767	Synj1	100	95.292	ENSAMEG00000015028	SYNJ1	81	93.410	Ailuropoda_melanoleuca
ENSPEMG00000018767	Synj1	100	80.000	ENSACIG00000008857	synj1	97	68.227	Amphilophus_citrinellus
ENSPEMG00000018767	Synj1	100	83.022	ENSAOCG00000009835	synj1	97	69.191	Amphiprion_ocellaris
ENSPEMG00000018767	Synj1	100	83.022	ENSAPEG00000021010	synj1	77	66.815	Amphiprion_percula
ENSPEMG00000018767	Synj1	100	82.590	ENSATEG00000002306	synj1	73	68.450	Anabas_testudineus
ENSPEMG00000018767	Synj1	100	91.335	ENSAPLG00000011832	SYNJ1	83	84.453	Anas_platyrhynchos
ENSPEMG00000018767	Synj1	100	90.157	ENSACAG00000003006	-	100	83.409	Anolis_carolinensis
ENSPEMG00000018767	Synj1	100	96.681	ENSANAG00000027325	SYNJ1	100	92.454	Aotus_nancymaae
ENSPEMG00000018767	Synj1	100	82.878	ENSACLG00000002255	synj1	100	67.341	Astatotilapia_calliptera
ENSPEMG00000018767	Synj1	100	83.333	ENSAMXG00000008208	synj1	77	68.509	Astyanax_mexicanus
ENSPEMG00000018767	Synj1	100	96.970	ENSBTAG00000003063	SYNJ1	100	92.418	Bos_taurus
ENSPEMG00000018767	Synj1	100	97.258	ENSCJAG00000009187	SYNJ1	100	92.835	Callithrix_jacchus
ENSPEMG00000018767	Synj1	100	96.537	ENSCAFG00000009041	SYNJ1	99	87.634	Canis_familiaris
ENSPEMG00000018767	Synj1	100	96.970	ENSCAFG00020025776	SYNJ1	98	87.948	Canis_lupus_dingo
ENSPEMG00000018767	Synj1	100	96.970	ENSCHIG00000005095	SYNJ1	84	90.115	Capra_hircus
ENSPEMG00000018767	Synj1	100	96.681	ENSTSYG00000014541	SYNJ1	100	92.220	Carlito_syrichta
ENSPEMG00000018767	Synj1	89	87.081	ENSCAPG00000014483	SYNJ1	84	78.601	Cavia_aperea
ENSPEMG00000018767	Synj1	100	97.114	ENSCPOG00000012182	SYNJ1	100	93.211	Cavia_porcellus
ENSPEMG00000018767	Synj1	100	96.681	ENSCCAG00000020825	SYNJ1	100	92.226	Cebus_capucinus
ENSPEMG00000018767	Synj1	100	97.114	ENSCATG00000033891	SYNJ1	100	92.754	Cercocebus_atys
ENSPEMG00000018767	Synj1	100	96.825	ENSCLAG00000009796	SYNJ1	100	96.825	Chinchilla_lanigera
ENSPEMG00000018767	Synj1	100	95.435	ENSCSAG00000009654	SYNJ1	100	93.745	Chlorocebus_sabaeus
ENSPEMG00000018767	Synj1	83	100.000	ENSCHOG00000012390	SYNJ1	68	90.228	Choloepus_hoffmanni
ENSPEMG00000018767	Synj1	100	92.929	ENSCPBG00000006402	SYNJ1	97	87.298	Chrysemys_picta_bellii
ENSPEMG00000018767	Synj1	100	97.114	ENSCANG00000031359	SYNJ1	100	92.754	Colobus_angolensis_palliatus
ENSPEMG00000018767	Synj1	100	98.124	ENSCGRG00001010861	Synj1	100	96.407	Cricetulus_griseus_chok1gshd
ENSPEMG00000018767	Synj1	100	98.124	ENSCGRG00000015749	Synj1	100	98.124	Cricetulus_griseus_crigri
ENSPEMG00000018767	Synj1	100	81.366	ENSCSEG00000019614	synj1	99	68.298	Cynoglossus_semilaevis
ENSPEMG00000018767	Synj1	100	77.778	ENSCVAG00000019250	synj1	100	65.146	Cyprinodon_variegatus
ENSPEMG00000018767	Synj1	100	82.077	ENSDARG00000025011	synj1	100	68.889	Danio_rerio
ENSPEMG00000018767	Synj1	100	88.952	ENSDNOG00000010732	SYNJ1	83	89.787	Dasypus_novemcinctus
ENSPEMG00000018767	Synj1	100	97.114	ENSDORG00000014735	-	100	97.114	Dipodomys_ordii
ENSPEMG00000018767	Synj1	86	95.726	ENSETEG00000018674	SYNJ1	73	95.726	Echinops_telfairi
ENSPEMG00000018767	Synj1	100	97.258	ENSEASG00005006287	SYNJ1	98	93.347	Equus_asinus_asinus
ENSPEMG00000018767	Synj1	100	97.114	ENSECAG00000004829	SYNJ1	100	88.356	Equus_caballus
ENSPEMG00000018767	Synj1	83	100.000	ENSEEUG00000005150	SYNJ1	79	86.867	Erinaceus_europaeus
ENSPEMG00000018767	Synj1	100	81.871	ENSELUG00000009731	synj1	95	63.208	Esox_lucius
ENSPEMG00000018767	Synj1	100	96.825	ENSFCAG00000012498	SYNJ1	100	91.933	Felis_catus
ENSPEMG00000018767	Synj1	74	78.243	ENSFALG00000004680	SYNJ1	78	78.243	Ficedula_albicollis
ENSPEMG00000018767	Synj1	100	97.258	ENSFDAG00000016818	SYNJ1	100	97.258	Fukomys_damarensis
ENSPEMG00000018767	Synj1	100	81.366	ENSFHEG00000017689	synj1	78	67.006	Fundulus_heteroclitus
ENSPEMG00000018767	Synj1	93	79.573	ENSGMOG00000014852	synj1	77	72.915	Gadus_morhua
ENSPEMG00000018767	Synj1	100	92.641	ENSGALG00000034317	SYNJ1	82	80.670	Gallus_gallus
ENSPEMG00000018767	Synj1	100	82.878	ENSGAFG00000019466	synj1	76	67.452	Gambusia_affinis
ENSPEMG00000018767	Synj1	98	76.301	ENSGACG00000020575	synj1	94	64.058	Gasterosteus_aculeatus
ENSPEMG00000018767	Synj1	100	93.074	ENSGAGG00000022523	SYNJ1	100	84.586	Gopherus_agassizii
ENSPEMG00000018767	Synj1	100	96.970	ENSGGOG00000015945	SYNJ1	100	92.525	Gorilla_gorilla
ENSPEMG00000018767	Synj1	100	81.508	ENSHBUG00000007774	synj1	100	67.341	Haplochromis_burtoni
ENSPEMG00000018767	Synj1	100	97.258	ENSHGLG00000006420	SYNJ1	100	97.258	Heterocephalus_glaber_female
ENSPEMG00000018767	Synj1	100	97.258	ENSHGLG00100012591	SYNJ1	100	97.258	Heterocephalus_glaber_male
ENSPEMG00000018767	Synj1	100	77.122	ENSHCOG00000012774	synj1	96	64.286	Hippocampus_comes
ENSPEMG00000018767	Synj1	100	83.165	ENSIPUG00000010691	SYNJ1	83	70.260	Ictalurus_punctatus
ENSPEMG00000018767	Synj1	100	97.258	ENSSTOG00000015806	SYNJ1	100	95.271	Ictidomys_tridecemlineatus
ENSPEMG00000018767	Synj1	99	89.076	ENSJJAG00000020168	Synj1	82	89.076	Jaculus_jaculus
ENSPEMG00000018767	Synj1	100	82.446	ENSKMAG00000004221	synj1	87	77.134	Kryptolebias_marmoratus
ENSPEMG00000018767	Synj1	100	81.962	ENSLBEG00000015081	synj1	82	75.407	Labrus_bergylta
ENSPEMG00000018767	Synj1	100	86.544	ENSLACG00000005928	SYNJ1	82	77.477	Latimeria_chalumnae
ENSPEMG00000018767	Synj1	100	84.637	ENSLOCG00000009230	synj1	88	76.564	Lepisosteus_oculatus
ENSPEMG00000018767	Synj1	100	94.864	ENSLAFG00000011806	SYNJ1	83	92.035	Loxodonta_africana
ENSPEMG00000018767	Synj1	98	92.896	ENSMFAG00000018883	SYNJ1	99	93.548	Macaca_fascicularis
ENSPEMG00000018767	Synj1	100	95.863	ENSMMUG00000004624	SYNJ1	100	93.607	Macaca_mulatta
ENSPEMG00000018767	Synj1	100	97.114	ENSMNEG00000040077	SYNJ1	94	93.822	Macaca_nemestrina
ENSPEMG00000018767	Synj1	100	97.114	ENSMLEG00000037029	SYNJ1	100	92.754	Mandrillus_leucophaeus
ENSPEMG00000018767	Synj1	100	83.309	ENSMAMG00000013404	synj1	78	69.096	Mastacembelus_armatus
ENSPEMG00000018767	Synj1	100	82.878	ENSMZEG00005024358	synj1	100	67.148	Maylandia_zebra
ENSPEMG00000018767	Synj1	100	89.250	ENSMGAG00000014522	SYNJ1	83	83.976	Meleagris_gallopavo
ENSPEMG00000018767	Synj1	100	98.413	ENSMAUG00000009743	Synj1	100	98.413	Mesocricetus_auratus
ENSPEMG00000018767	Synj1	100	97.114	ENSMICG00000034953	SYNJ1	100	92.982	Microcebus_murinus
ENSPEMG00000018767	Synj1	100	81.560	ENSMMOG00000010203	synj1	97	67.963	Mola_mola
ENSPEMG00000018767	Synj1	100	85.877	ENSMODG00000021073	SYNJ1	100	79.939	Monodelphis_domestica
ENSPEMG00000018767	Synj1	100	83.022	ENSMALG00000014015	synj1	76	69.413	Monopterus_albus
ENSPEMG00000018767	Synj1	100	98.124	MGP_CAROLIEiJ_G0020951	Synj1	100	98.124	Mus_caroli
ENSPEMG00000018767	Synj1	100	98.557	ENSMUSG00000022973	Synj1	100	98.557	Mus_musculus
ENSPEMG00000018767	Synj1	100	98.557	MGP_PahariEiJ_G0016656	Synj1	100	98.557	Mus_pahari
ENSPEMG00000018767	Synj1	100	98.846	MGP_SPRETEiJ_G0021857	Synj1	100	98.846	Mus_spretus
ENSPEMG00000018767	Synj1	100	95.745	ENSMPUG00000001153	SYNJ1	83	92.912	Mustela_putorius_furo
ENSPEMG00000018767	Synj1	62	83.456	ENSMLUG00000005764	-	76	83.456	Myotis_lucifugus
ENSPEMG00000018767	Synj1	94	94.793	ENSMLUG00000026584	-	100	94.667	Myotis_lucifugus
ENSPEMG00000018767	Synj1	100	97.691	ENSNGAG00000000453	Synj1	100	97.691	Nannospalax_galili
ENSPEMG00000018767	Synj1	100	83.022	ENSNBRG00000011936	synj1	99	64.894	Neolamprologus_brichardi
ENSPEMG00000018767	Synj1	88	89.303	ENSNLEG00000003734	SYNJ1	100	87.870	Nomascus_leucogenys
ENSPEMG00000018767	Synj1	89	79.399	ENSMEUG00000004158	-	73	76.660	Notamacropus_eugenii
ENSPEMG00000018767	Synj1	100	90.300	ENSOPRG00000013602	SYNJ1	75	92.805	Ochotona_princeps
ENSPEMG00000018767	Synj1	100	97.114	ENSODEG00000002409	-	100	97.114	Octodon_degus
ENSPEMG00000018767	Synj1	100	81.935	ENSONIG00000004667	synj1	91	72.082	Oreochromis_niloticus
ENSPEMG00000018767	Synj1	94	91.071	ENSOANG00000006929	SYNJ1	83	84.657	Ornithorhynchus_anatinus
ENSPEMG00000018767	Synj1	100	95.720	ENSOCUG00000001420	SYNJ1	83	89.808	Oryctolagus_cuniculus
ENSPEMG00000018767	Synj1	100	81.727	ENSORLG00000004320	synj1	96	67.930	Oryzias_latipes
ENSPEMG00000018767	Synj1	100	78.236	ENSORLG00020011994	synj1	95	68.277	Oryzias_latipes_hni
ENSPEMG00000018767	Synj1	100	81.871	ENSORLG00015018077	synj1	77	66.349	Oryzias_latipes_hsok
ENSPEMG00000018767	Synj1	100	82.446	ENSOMEG00000014322	synj1	95	67.221	Oryzias_melastigma
ENSPEMG00000018767	Synj1	100	89.605	ENSOGAG00000006010	SYNJ1	81	89.605	Otolemur_garnettii
ENSPEMG00000018767	Synj1	100	95.319	ENSOARG00000013414	SYNJ1	81	91.845	Ovis_aries
ENSPEMG00000018767	Synj1	100	96.970	ENSPPAG00000026784	SYNJ1	100	92.830	Pan_paniscus
ENSPEMG00000018767	Synj1	100	96.970	ENSPPRG00000023469	SYNJ1	100	92.085	Panthera_pardus
ENSPEMG00000018767	Synj1	100	96.825	ENSPTIG00000007930	SYNJ1	100	92.009	Panthera_tigris_altaica
ENSPEMG00000018767	Synj1	100	96.970	ENSPTRG00000023787	SYNJ1	100	92.830	Pan_troglodytes
ENSPEMG00000018767	Synj1	100	96.970	ENSPTRG00000048135	-	100	88.889	Pan_troglodytes
ENSPEMG00000018767	Synj1	100	97.114	ENSPANG00000022531	SYNJ1	100	93.898	Papio_anubis
ENSPEMG00000018767	Synj1	100	84.029	ENSPKIG00000022603	synj1	95	76.083	Paramormyrops_kingsleyae
ENSPEMG00000018767	Synj1	100	82.878	ENSPMGG00000016831	synj1	91	67.447	Periophthalmus_magnuspinnatus
ENSPEMG00000018767	Synj1	100	63.983	ENSPMAG00000002887	synj1	96	53.328	Petromyzon_marinus
ENSPEMG00000018767	Synj1	100	91.919	ENSPCIG00000016372	SYNJ1	100	85.508	Phascolarctos_cinereus
ENSPEMG00000018767	Synj1	100	81.250	ENSPFOG00000016886	synj1	100	67.261	Poecilia_formosa
ENSPEMG00000018767	Synj1	100	82.158	ENSPLAG00000017559	synj1	100	64.255	Poecilia_latipinna
ENSPEMG00000018767	Synj1	100	82.014	ENSPMEG00000007643	synj1	79	66.442	Poecilia_mexicana
ENSPEMG00000018767	Synj1	100	82.446	ENSPREG00000012412	synj1	100	67.152	Poecilia_reticulata
ENSPEMG00000018767	Synj1	100	95.435	ENSPPYG00000011365	SYNJ1	94	93.364	Pongo_abelii
ENSPEMG00000018767	Synj1	83	92.857	ENSPCAG00000009906	SYNJ1	69	92.857	Procavia_capensis
ENSPEMG00000018767	Synj1	85	99.465	ENSPCOG00000024841	SYNJ1	95	89.356	Propithecus_coquereli
ENSPEMG00000018767	Synj1	100	95.292	ENSPVAG00000000892	SYNJ1	83	88.966	Pteropus_vampyrus
ENSPEMG00000018767	Synj1	100	82.878	ENSPNYG00000022989	synj1	100	66.278	Pundamilia_nyererei
ENSPEMG00000018767	Synj1	100	83.165	ENSPNAG00000021119	synj1	89	78.087	Pygocentrus_nattereri
ENSPEMG00000018767	Synj1	100	97.575	ENSRNOG00000002051	Synj1	100	96.262	Rattus_norvegicus
ENSPEMG00000018767	Synj1	100	96.970	ENSRBIG00000034477	SYNJ1	100	92.601	Rhinopithecus_bieti
ENSPEMG00000018767	Synj1	100	95.578	ENSRROG00000039256	SYNJ1	100	92.754	Rhinopithecus_roxellana
ENSPEMG00000018767	Synj1	100	97.114	ENSSBOG00000021001	SYNJ1	100	92.378	Saimiri_boliviensis_boliviensis
ENSPEMG00000018767	Synj1	100	91.775	ENSSHAG00000008538	SYNJ1	84	83.536	Sarcophilus_harrisii
ENSPEMG00000018767	Synj1	100	83.309	ENSSFOG00015006095	synj1	79	70.666	Scleropages_formosus
ENSPEMG00000018767	Synj1	100	82.302	ENSSMAG00000018066	synj1	95	66.295	Scophthalmus_maximus
ENSPEMG00000018767	Synj1	100	82.878	ENSSDUG00000013058	synj1	77	70.488	Seriola_dumerili
ENSPEMG00000018767	Synj1	100	82.446	ENSSLDG00000021406	synj1	100	69.963	Seriola_lalandi_dorsalis
ENSPEMG00000018767	Synj1	76	93.271	ENSSARG00000009490	SYNJ1	60	95.113	Sorex_araneus
ENSPEMG00000018767	Synj1	100	92.785	ENSSPUG00000012552	SYNJ1	82	80.198	Sphenodon_punctatus
ENSPEMG00000018767	Synj1	89	83.280	ENSSPAG00000006812	SYNJ1	75	66.773	Stegastes_partitus
ENSPEMG00000018767	Synj1	100	83.309	ENSSPAG00000017029	synj1	98	65.517	Stegastes_partitus
ENSPEMG00000018767	Synj1	100	97.114	ENSSSCG00000012035	SYNJ1	100	92.798	Sus_scrofa
ENSPEMG00000018767	Synj1	100	90.935	ENSTGUG00000013445	SYNJ1	83	83.536	Taeniopygia_guttata
ENSPEMG00000018767	Synj1	100	81.871	ENSTRUG00000006907	synj1	96	67.913	Takifugu_rubripes
ENSPEMG00000018767	Synj1	100	77.279	ENSTNIG00000009940	synj1	97	68.429	Tetraodon_nigroviridis
ENSPEMG00000018767	Synj1	92	99.465	ENSTBEG00000016298	SYNJ1	75	86.957	Tupaia_belangeri
ENSPEMG00000018767	Synj1	100	89.158	ENSTTRG00000002222	SYNJ1	83	81.895	Tursiops_truncatus
ENSPEMG00000018767	Synj1	100	96.970	ENSUAMG00000018606	SYNJ1	99	94.802	Ursus_americanus
ENSPEMG00000018767	Synj1	100	96.970	ENSUMAG00000018419	SYNJ1	99	94.802	Ursus_maritimus
ENSPEMG00000018767	Synj1	87	98.571	ENSVPAG00000001241	SYNJ1	70	98.571	Vicugna_pacos
ENSPEMG00000018767	Synj1	100	97.114	ENSVVUG00000023125	SYNJ1	100	93.745	Vulpes_vulpes
ENSPEMG00000018767	Synj1	100	85.127	ENSXETG00000009899	synj1	84	77.978	Xenopus_tropicalis
ENSPEMG00000018767	Synj1	100	81.366	ENSXCOG00000011896	synj1	99	67.212	Xiphophorus_couchianus
ENSPEMG00000018767	Synj1	100	81.081	ENSXMAG00000017524	synj1	100	66.836	Xiphophorus_maculatus