EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000018871 (Gene tree)
Gene ID: 102920777
Gene Symbol: -
Alias: -
Full Name: zinc finger CCCH-type%2C RNA binding motif and serine/arginine rich 2
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 24873 bases
Position: chrKI615346.1:4201701-4226573
Accession: 102920777
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000021141	zf-CCCH	PF00642.24	3.2e-13	1	1
ENSPEMP00000021147	zf-CCCH	PF00642.24	4.7e-13	1	1
ENSPEMP00000021144	zf-CCCH	PF00642.24	5.8e-13	1	1
ENSPEMP00000021141	RRM_1	PF00076.22	6.2e-05	1	1
ENSPEMP00000021147	RRM_1	PF00076.22	7.5e-05	1	1
ENSPEMP00000021144	RRM_1	PF00076.22	8.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000025496	-	1296	-	ENSPEMP00000021141	431 (aa)	-	-
ENSPEMT00000025502	-	1485	XM_006973210	ENSPEMP00000021147	494 (aa)	XP_006973272	-
ENSPEMT00000025499	-	1617	-	ENSPEMP00000021144	538 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000018871's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000018871's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000018871	-	88	77.573	ENSPEMG00000013373	Zrsr1	96	74.645
ENSPEMG00000018871	-	55	30.962	ENSPEMG00000013477	-	98	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000018871	-	88	82.586	ENSANAG00000036245	-	81	79.856	Aotus_nancymaae
ENSPEMG00000018871	-	74	70.405	ENSCAFG00000025134	-	80	65.043	Canis_familiaris
ENSPEMG00000018871	-	66	68.403	ENSGAFG00000008284	-	64	56.201	Gambusia_affinis
ENSPEMG00000018871	-	95	87.073	MGP_CAROLIEiJ_G0033555	Zrsr2	80	87.234	Mus_caroli
ENSPEMG00000018871	-	87	90.349	ENSMUSG00000031370	Zrsr2	78	87.470	Mus_musculus
ENSPEMG00000018871	-	87	90.349	MGP_PahariEiJ_G0032094	Zrsr2	82	86.175	Mus_pahari
ENSPEMG00000018871	-	95	87.286	MGP_SPRETEiJ_G0034725	Zrsr2	80	86.480	Mus_spretus
ENSPEMG00000018871	-	95	90.488	ENSRNOG00000033176	Zrsr2	78	90.544	Rattus_norvegicus
ENSPEMG00000018871	-	73	62.776	ENSSLDG00000009759	-	58	65.141	Seriola_lalandi_dorsalis
ENSPEMG00000018871	-	60	82.857	ENSSARG00000000116	-	58	81.739	Sorex_araneus