EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000019340 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 31506 bases
Position: chrKI615646.1:1494308-1525813
Accession: 102919513
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000021801	CPL	PF08144.11	2.2e-18	1	2
ENSPEMP00000021801	CPL	PF08144.11	2.2e-18	2	2
ENSPEMP00000021802	CPL	PF08144.11	5.9e-16	1	2
ENSPEMP00000021802	CPL	PF08144.11	5.9e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000026163	-	1764	XM_016005985	ENSPEMP00000021801	587 (aa)	XP_015861471	-
ENSPEMT00000026164	-	1647	-	ENSPEMP00000021802	548 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000019340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000019340's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000019340	-	90	94.000	ENSPEMG00000022273	-	88	94.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000019340	-	99	89.524	ENSG00000080608	PUM3	98	85.417	Homo_sapiens
ENSPEMG00000019340	-	88	46.154	ENSAPOG00000020252	pum3	99	44.290	Acanthochromis_polyacanthus
ENSPEMG00000019340	-	100	85.849	ENSAMEG00000012187	PUM3	89	85.849	Ailuropoda_melanoleuca
ENSPEMG00000019340	-	84	53.846	ENSACIG00000009786	pum3	92	44.385	Amphilophus_citrinellus
ENSPEMG00000019340	-	88	46.077	ENSAOCG00000004439	pum3	99	44.753	Amphiprion_ocellaris
ENSPEMG00000019340	-	88	46.077	ENSAPEG00000020523	pum3	99	44.753	Amphiprion_percula
ENSPEMG00000019340	-	81	50.187	ENSATEG00000005799	pum3	99	46.322	Anabas_testudineus
ENSPEMG00000019340	-	95	65.471	ENSAPLG00000002920	PUM3	100	59.135	Anas_platyrhynchos
ENSPEMG00000019340	-	92	73.770	ENSACAG00000003174	PUM3	87	73.770	Anolis_carolinensis
ENSPEMG00000019340	-	100	90.566	ENSANAG00000024520	PUM3	89	90.566	Aotus_nancymaae
ENSPEMG00000019340	-	99	45.685	ENSACLG00000001017	pum3	99	45.685	Astatotilapia_calliptera
ENSPEMG00000019340	-	92	60.000	ENSAMXG00000020911	pum3	99	52.997	Astyanax_mexicanus
ENSPEMG00000019340	-	100	86.792	ENSBTAG00000013357	PUM3	89	86.792	Bos_taurus
ENSPEMG00000019340	-	99	90.476	ENSCJAG00000010917	PUM3	89	89.623	Callithrix_jacchus
ENSPEMG00000019340	-	100	83.019	ENSCAFG00000002035	PUM3	99	74.114	Canis_familiaris
ENSPEMG00000019340	-	100	83.019	ENSCAFG00020026867	PUM3	99	74.114	Canis_lupus_dingo
ENSPEMG00000019340	-	100	85.849	ENSCHIG00000021559	PUM3	89	85.849	Capra_hircus
ENSPEMG00000019340	-	100	90.566	ENSTSYG00000007481	PUM3	89	90.566	Carlito_syrichta
ENSPEMG00000019340	-	100	79.787	ENSCAPG00000010592	-	99	70.724	Cavia_aperea
ENSPEMG00000019340	-	100	87.736	ENSCPOG00000008552	-	89	87.736	Cavia_porcellus
ENSPEMG00000019340	-	99	92.381	ENSCCAG00000032650	PUM3	89	92.381	Cebus_capucinus
ENSPEMG00000019340	-	100	87.736	ENSCATG00000024880	PUM3	89	87.736	Cercocebus_atys
ENSPEMG00000019340	-	100	85.849	ENSCLAG00000011892	PUM3	89	85.849	Chinchilla_lanigera
ENSPEMG00000019340	-	99	87.619	ENSCSAG00000008691	PUM3	89	86.792	Chlorocebus_sabaeus
ENSPEMG00000019340	-	100	88.679	ENSCHOG00000002535	PUM3	84	88.679	Choloepus_hoffmanni
ENSPEMG00000019340	-	100	68.142	ENSCPBG00000025470	PUM3	85	68.142	Chrysemys_picta_bellii
ENSPEMG00000019340	-	77	41.429	ENSCING00000024199	-	96	31.934	Ciona_intestinalis
ENSPEMG00000019340	-	84	38.679	ENSCSAVG00000006072	-	99	33.460	Ciona_savignyi
ENSPEMG00000019340	-	99	87.619	ENSCANG00000006142	PUM3	89	86.792	Colobus_angolensis_palliatus
ENSPEMG00000019340	-	100	90.351	ENSCGRG00001016402	Pum3	90	90.351	Cricetulus_griseus_chok1gshd
ENSPEMG00000019340	-	100	90.351	ENSCGRG00000010207	Pum3	90	90.351	Cricetulus_griseus_crigri
ENSPEMG00000019340	-	87	75.000	ENSCSEG00000001565	pum3	87	75.000	Cynoglossus_semilaevis
ENSPEMG00000019340	-	50	58.696	ENSCVAG00000006550	pum3	72	63.158	Cyprinodon_variegatus
ENSPEMG00000019340	-	80	81.818	ENSDARG00000087779	pum3	80	81.818	Danio_rerio
ENSPEMG00000019340	-	100	87.736	ENSDNOG00000008157	PUM3	62	87.736	Dasypus_novemcinctus
ENSPEMG00000019340	-	82	81.132	ENSETEG00000015331	PUM3	73	81.132	Echinops_telfairi
ENSPEMG00000019340	-	77	35.484	ENSEBUG00000011586	pum3	67	43.564	Eptatretus_burgeri
ENSPEMG00000019340	-	99	90.476	ENSEASG00005010350	PUM3	89	90.476	Equus_asinus_asinus
ENSPEMG00000019340	-	99	90.476	ENSECAG00000017193	PUM3	89	90.476	Equus_caballus
ENSPEMG00000019340	-	92	85.484	ENSEEUG00000010314	PUM3	78	94.737	Erinaceus_europaeus
ENSPEMG00000019340	-	87	61.538	ENSELUG00000002215	pum3	90	54.483	Esox_lucius
ENSPEMG00000019340	-	100	64.602	ENSFALG00000010509	PUM3	100	58.563	Ficedula_albicollis
ENSPEMG00000019340	-	100	86.916	ENSFDAG00000021027	PUM3	89	86.916	Fukomys_damarensis
ENSPEMG00000019340	-	87	50.485	ENSFHEG00000015576	pum3	99	41.361	Fundulus_heteroclitus
ENSPEMG00000019340	-	80	54.348	ENSGMOG00000014217	pum3	99	48.141	Gadus_morhua
ENSPEMG00000019340	-	99	63.393	ENSGALG00000010178	PUM3	100	57.580	Gallus_gallus
ENSPEMG00000019340	-	51	42.700	ENSGAFG00000001930	pum3	62	42.700	Gambusia_affinis
ENSPEMG00000019340	-	80	47.378	ENSGACG00000017878	pum3	97	47.467	Gasterosteus_aculeatus
ENSPEMG00000019340	-	100	67.257	ENSGAGG00000018983	PUM3	90	67.257	Gopherus_agassizii
ENSPEMG00000019340	-	99	89.524	ENSGGOG00000006143	PUM3	89	88.679	Gorilla_gorilla
ENSPEMG00000019340	-	99	42.790	ENSHBUG00000012903	pum3	89	53.571	Haplochromis_burtoni
ENSPEMG00000019340	-	100	88.679	ENSHGLG00000015868	-	89	88.679	Heterocephalus_glaber_female
ENSPEMG00000019340	-	100	88.679	ENSHGLG00100018825	PUM3	89	88.679	Heterocephalus_glaber_male
ENSPEMG00000019340	-	91	46.809	ENSHCOG00000010306	pum3	97	45.441	Hippocampus_comes
ENSPEMG00000019340	-	86	55.245	ENSIPUG00000024801	pum3	99	53.081	Ictalurus_punctatus
ENSPEMG00000019340	-	100	90.566	ENSSTOG00000009586	PUM3	89	90.566	Ictidomys_tridecemlineatus
ENSPEMG00000019340	-	99	86.667	ENSJJAG00000012563	Pum3	89	86.667	Jaculus_jaculus
ENSPEMG00000019340	-	80	60.317	ENSKMAG00000010277	pum3	83	60.317	Kryptolebias_marmoratus
ENSPEMG00000019340	-	99	43.750	ENSLBEG00000012213	pum3	99	43.881	Labrus_bergylta
ENSPEMG00000019340	-	100	64.151	ENSLACG00000008312	PUM3	100	55.725	Latimeria_chalumnae
ENSPEMG00000019340	-	95	60.952	ENSLOCG00000012529	pum3	99	53.521	Lepisosteus_oculatus
ENSPEMG00000019340	-	100	84.906	ENSLAFG00000017341	PUM3	89	84.906	Loxodonta_africana
ENSPEMG00000019340	-	99	88.571	ENSMFAG00000001430	PUM3	89	87.736	Macaca_fascicularis
ENSPEMG00000019340	-	99	88.571	ENSMMUG00000002362	PUM3	88	88.571	Macaca_mulatta
ENSPEMG00000019340	-	99	88.571	ENSMNEG00000035288	PUM3	89	87.736	Macaca_nemestrina
ENSPEMG00000019340	-	99	88.571	ENSMLEG00000034820	PUM3	89	87.736	Mandrillus_leucophaeus
ENSPEMG00000019340	-	83	47.266	ENSMAMG00000022861	pum3	98	45.383	Mastacembelus_armatus
ENSPEMG00000019340	-	99	45.821	ENSMZEG00005014205	pum3	97	45.821	Maylandia_zebra
ENSPEMG00000019340	-	87	70.588	ENSMGAG00000002255	PUM3	87	70.588	Meleagris_gallopavo
ENSPEMG00000019340	-	100	90.351	ENSMAUG00000009733	Pum3	90	90.351	Mesocricetus_auratus
ENSPEMG00000019340	-	99	89.524	ENSMICG00000045916	PUM3	77	89.524	Microcebus_murinus
ENSPEMG00000019340	-	100	88.596	ENSMOCG00000014830	-	91	88.596	Microtus_ochrogaster
ENSPEMG00000019340	-	100	92.105	ENSMOCG00000019519	-	90	92.105	Microtus_ochrogaster
ENSPEMG00000019340	-	93	44.706	ENSMMOG00000012184	pum3	99	44.714	Mola_mola
ENSPEMG00000019340	-	100	72.642	ENSMODG00000015417	PUM3	86	72.642	Monodelphis_domestica
ENSPEMG00000019340	-	81	48.321	ENSMALG00000022164	pum3	93	44.882	Monopterus_albus
ENSPEMG00000019340	-	100	88.679	MGP_CAROLIEiJ_G0022845	Pum3	89	88.679	Mus_caroli
ENSPEMG00000019340	-	100	88.679	ENSMUSG00000041360	Pum3	89	88.679	Mus_musculus
ENSPEMG00000019340	-	99	89.524	MGP_PahariEiJ_G0014338	Pum3	99	78.980	Mus_pahari
ENSPEMG00000019340	-	100	87.736	MGP_SPRETEiJ_G0023763	Pum3	99	77.932	Mus_spretus
ENSPEMG00000019340	-	100	81.132	ENSMPUG00000005125	PUM3	100	72.573	Mustela_putorius_furo
ENSPEMG00000019340	-	99	86.667	ENSMLUG00000002309	PUM3	89	86.667	Myotis_lucifugus
ENSPEMG00000019340	-	100	92.453	ENSNGAG00000019468	Pum3	89	92.453	Nannospalax_galili
ENSPEMG00000019340	-	90	46.599	ENSNBRG00000021370	pum3	93	46.599	Neolamprologus_brichardi
ENSPEMG00000019340	-	99	90.476	ENSNLEG00000008712	PUM3	89	89.623	Nomascus_leucogenys
ENSPEMG00000019340	-	63	81.938	ENSMEUG00000013606	-	62	81.893	Notamacropus_eugenii
ENSPEMG00000019340	-	79	93.617	ENSOPRG00000004225	-	65	97.368	Ochotona_princeps
ENSPEMG00000019340	-	100	80.189	ENSODEG00000016477	-	100	69.735	Octodon_degus
ENSPEMG00000019340	-	100	87.736	ENSODEG00000003625	-	89	87.736	Octodon_degus
ENSPEMG00000019340	-	99	44.662	ENSONIG00000012733	pum3	89	54.808	Oreochromis_niloticus
ENSPEMG00000019340	-	82	74.400	ENSOANG00000014995	PUM3	100	64.234	Ornithorhynchus_anatinus
ENSPEMG00000019340	-	100	83.019	ENSOCUG00000004189	-	100	74.268	Oryctolagus_cuniculus
ENSPEMG00000019340	-	99	82.075	ENSOCUG00000026104	-	99	73.602	Oryctolagus_cuniculus
ENSPEMG00000019340	-	91	43.874	ENSORLG00000014935	pum3	99	42.946	Oryzias_latipes
ENSPEMG00000019340	-	91	43.987	ENSORLG00020002841	pum3	99	42.857	Oryzias_latipes_hni
ENSPEMG00000019340	-	95	42.813	ENSORLG00015015906	pum3	86	64.286	Oryzias_latipes_hsok
ENSPEMG00000019340	-	90	51.220	ENSOMEG00000009427	pum3	82	51.220	Oryzias_melastigma
ENSPEMG00000019340	-	100	85.849	ENSOGAG00000008125	-	89	85.849	Otolemur_garnettii
ENSPEMG00000019340	-	99	67.568	ENSOGAG00000033481	-	89	67.568	Otolemur_garnettii
ENSPEMG00000019340	-	100	85.849	ENSOARG00000013337	PUM3	89	85.849	Ovis_aries
ENSPEMG00000019340	-	99	83.051	ENSPPAG00000041337	PUM3	100	76.271	Pan_paniscus
ENSPEMG00000019340	-	100	83.019	ENSPPRG00000000809	PUM3	100	72.881	Panthera_pardus
ENSPEMG00000019340	-	100	83.962	ENSPTIG00000021934	PUM3	100	73.190	Panthera_tigris_altaica
ENSPEMG00000019340	-	99	89.524	ENSPTRG00000020735	PUM3	89	88.679	Pan_troglodytes
ENSPEMG00000019340	-	100	86.792	ENSPANG00000025118	PUM3	100	75.926	Papio_anubis
ENSPEMG00000019340	-	99	52.294	ENSPKIG00000022249	pum3	99	52.295	Paramormyrops_kingsleyae
ENSPEMG00000019340	-	100	63.717	ENSPSIG00000016272	PUM3	100	57.781	Pelodiscus_sinensis
ENSPEMG00000019340	-	72	55.096	ENSPMGG00000021261	pum3	98	47.658	Periophthalmus_magnuspinnatus
ENSPEMG00000019340	-	93	76.190	ENSPCIG00000030598	PUM3	83	76.190	Phascolarctos_cinereus
ENSPEMG00000019340	-	90	45.151	ENSPFOG00000001719	pum3	98	45.151	Poecilia_formosa
ENSPEMG00000019340	-	88	44.905	ENSPLAG00000020010	pum3	89	45.862	Poecilia_latipinna
ENSPEMG00000019340	-	90	45.783	ENSPMEG00000017451	pum3	95	45.274	Poecilia_mexicana
ENSPEMG00000019340	-	67	39.189	ENSPREG00000019478	-	93	39.344	Poecilia_reticulata
ENSPEMG00000019340	-	99	89.524	ENSPPYG00000019255	PUM3	89	88.679	Pongo_abelii
ENSPEMG00000019340	-	100	73.585	ENSPCAG00000005797	PUM3	84	73.585	Procavia_capensis
ENSPEMG00000019340	-	100	88.679	ENSPCOG00000027325	PUM3	89	88.679	Propithecus_coquereli
ENSPEMG00000019340	-	100	82.075	ENSPVAG00000016135	PUM3	95	71.605	Pteropus_vampyrus
ENSPEMG00000019340	-	99	45.536	ENSPNYG00000016124	pum3	99	45.536	Pundamilia_nyererei
ENSPEMG00000019340	-	87	61.905	ENSPNAG00000026524	pum3	92	54.217	Pygocentrus_nattereri
ENSPEMG00000019340	-	100	88.679	ENSRNOG00000012574	Pum3	89	88.679	Rattus_norvegicus
ENSPEMG00000019340	-	100	86.792	ENSRNOG00000048356	RGD1308750	100	76.852	Rattus_norvegicus
ENSPEMG00000019340	-	100	86.792	ENSRBIG00000036924	PUM3	89	86.792	Rhinopithecus_bieti
ENSPEMG00000019340	-	99	87.619	ENSRROG00000041089	PUM3	100	75.926	Rhinopithecus_roxellana
ENSPEMG00000019340	-	99	93.333	ENSSBOG00000028066	PUM3	89	92.453	Saimiri_boliviensis_boliviensis
ENSPEMG00000019340	-	100	78.302	ENSSHAG00000003730	PUM3	89	78.302	Sarcophilus_harrisii
ENSPEMG00000019340	-	90	62.559	ENSSFOG00015018778	pum3	99	53.434	Scleropages_formosus
ENSPEMG00000019340	-	85	48.301	ENSSMAG00000013236	pum3	99	46.308	Scophthalmus_maximus
ENSPEMG00000019340	-	88	46.990	ENSSDUG00000001887	pum3	99	44.593	Seriola_dumerili
ENSPEMG00000019340	-	88	47.157	ENSSLDG00000015766	pum3	99	45.127	Seriola_lalandi_dorsalis
ENSPEMG00000019340	-	95	87.736	ENSSARG00000000579	PUM3	88	87.736	Sorex_araneus
ENSPEMG00000019340	-	100	67.257	ENSSPUG00000001707	PUM3	90	67.257	Sphenodon_punctatus
ENSPEMG00000019340	-	81	48.224	ENSSPAG00000003976	pum3	99	44.242	Stegastes_partitus
ENSPEMG00000019340	-	100	87.736	ENSSSCG00000005227	PUM3	89	87.736	Sus_scrofa
ENSPEMG00000019340	-	100	66.981	ENSTGUG00000005339	PUM3	100	58.706	Taeniopygia_guttata
ENSPEMG00000019340	-	98	45.889	ENSTRUG00000004074	pum3	99	45.889	Takifugu_rubripes
ENSPEMG00000019340	-	85	48.307	ENSTNIG00000010325	pum3	97	46.922	Tetraodon_nigroviridis
ENSPEMG00000019340	-	76	87.736	ENSTBEG00000013058	PUM3	67	87.736	Tupaia_belangeri
ENSPEMG00000019340	-	100	86.792	ENSTTRG00000001062	PUM3	85	86.792	Tursiops_truncatus
ENSPEMG00000019340	-	100	85.849	ENSUMAG00000018443	PUM3	88	85.849	Ursus_maritimus
ENSPEMG00000019340	-	100	86.792	ENSVPAG00000010766	PUM3	88	86.792	Vicugna_pacos
ENSPEMG00000019340	-	100	83.019	ENSVVUG00000006527	PUM3	99	74.114	Vulpes_vulpes
ENSPEMG00000019340	-	96	48.576	ENSXETG00000011707	pum3	97	48.576	Xenopus_tropicalis
ENSPEMG00000019340	-	91	45.394	ENSXCOG00000006725	pum3	99	45.394	Xiphophorus_couchianus
ENSPEMG00000019340	-	90	45.634	ENSXMAG00000002926	pum3	95	45.634	Xiphophorus_maculatus