EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000019634 (Gene tree)
Gene ID: 102902820
Gene Symbol: -
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 32398 bases
Position: chrKI615568.1:1256068-1288465
Accession: 102902820
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000022202	SRP54	PF00448.22	1.2e-77	1	1
ENSPEMP00000022201	SRP54	PF00448.22	1.5e-77	1	1
ENSPEMP00000022201	SRP54_N	PF02881.19	1.5e-20	1	1
ENSPEMP00000022202	SRP54_N	PF02881.19	3.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000026566	-	1236	XM_016003767	ENSPEMP00000022202	411 (aa)	XP_015859253	-
ENSPEMT00000026565	-	1422	-	ENSPEMP00000022201	473 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000019634's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000019634's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000019634	-	100	86.905	ENSG00000100883	SRP54	100	100.000	Homo_sapiens
ENSPEMG00000019634	-	100	83.929	ENSAPOG00000011314	srp54	100	83.929	Acanthochromis_polyacanthus
ENSPEMG00000019634	-	100	86.905	ENSAMEG00000015544	SRP54	100	86.905	Ailuropoda_melanoleuca
ENSPEMG00000019634	-	93	80.587	ENSACIG00000022831	srp54	96	83.747	Amphilophus_citrinellus
ENSPEMG00000019634	-	100	83.929	ENSAOCG00000019401	srp54	100	83.929	Amphiprion_ocellaris
ENSPEMG00000019634	-	100	83.929	ENSAPEG00000001977	srp54	100	83.929	Amphiprion_percula
ENSPEMG00000019634	-	100	84.325	ENSATEG00000013877	srp54	100	84.325	Anabas_testudineus
ENSPEMG00000019634	-	94	85.654	ENSAPLG00000010125	SRP54	95	85.654	Anas_platyrhynchos
ENSPEMG00000019634	-	63	66.565	ENSACAG00000001124	-	100	66.565	Anolis_carolinensis
ENSPEMG00000019634	-	85	81.567	ENSACAG00000010631	-	100	81.567	Anolis_carolinensis
ENSPEMG00000019634	-	100	86.680	ENSACAG00000002103	-	100	86.680	Anolis_carolinensis
ENSPEMG00000019634	-	100	86.905	ENSANAG00000022133	SRP54	100	86.905	Aotus_nancymaae
ENSPEMG00000019634	-	100	84.127	ENSACLG00000015866	srp54	100	84.127	Astatotilapia_calliptera
ENSPEMG00000019634	-	100	83.929	ENSAMXG00000032669	SRP54	100	83.929	Astyanax_mexicanus
ENSPEMG00000019634	-	100	86.905	ENSBTAG00000019085	SRP54	100	86.905	Bos_taurus
ENSPEMG00000019634	-	100	75.309	WBGene00009012	F21D5.7	100	62.651	Caenorhabditis_elegans
ENSPEMG00000019634	-	100	86.905	ENSCJAG00000006581	SRP54	100	86.905	Callithrix_jacchus
ENSPEMG00000019634	-	100	86.905	ENSCAFG00000013331	SRP54	100	86.905	Canis_familiaris
ENSPEMG00000019634	-	100	86.905	ENSCAFG00020023427	SRP54	100	86.905	Canis_lupus_dingo
ENSPEMG00000019634	-	100	86.905	ENSCHIG00000026345	SRP54	100	86.905	Capra_hircus
ENSPEMG00000019634	-	100	86.706	ENSTSYG00000002680	-	100	86.706	Carlito_syrichta
ENSPEMG00000019634	-	94	75.957	ENSTSYG00000035333	-	93	75.957	Carlito_syrichta
ENSPEMG00000019634	-	91	60.870	ENSCAPG00000008780	SRP54	100	57.050	Cavia_aperea
ENSPEMG00000019634	-	100	86.508	ENSCPOG00000003691	SRP54	100	86.508	Cavia_porcellus
ENSPEMG00000019634	-	89	84.048	ENSCCAG00000024179	SRP54	100	84.248	Cebus_capucinus
ENSPEMG00000019634	-	100	86.905	ENSCATG00000034083	SRP54	100	86.905	Cercocebus_atys
ENSPEMG00000019634	-	100	86.905	ENSCLAG00000015076	SRP54	100	86.905	Chinchilla_lanigera
ENSPEMG00000019634	-	100	86.905	ENSCSAG00000015575	SRP54	100	86.905	Chlorocebus_sabaeus
ENSPEMG00000019634	-	95	76.101	ENSCHOG00000008986	SRP54	100	76.101	Choloepus_hoffmanni
ENSPEMG00000019634	-	100	86.905	ENSCPBG00000026195	SRP54	100	86.905	Chrysemys_picta_bellii
ENSPEMG00000019634	-	100	72.619	ENSCING00000007380	-	100	72.619	Ciona_intestinalis
ENSPEMG00000019634	-	100	86.905	ENSCANG00000028532	SRP54	100	86.905	Colobus_angolensis_palliatus
ENSPEMG00000019634	-	100	86.905	ENSCGRG00001009525	-	100	86.905	Cricetulus_griseus_chok1gshd
ENSPEMG00000019634	-	79	99.383	ENSCGRG00000009453	-	83	91.690	Cricetulus_griseus_crigri
ENSPEMG00000019634	-	100	83.333	ENSCSEG00000012392	srp54	100	83.333	Cynoglossus_semilaevis
ENSPEMG00000019634	-	100	83.929	ENSCVAG00000010395	srp54	100	83.929	Cyprinodon_variegatus
ENSPEMG00000019634	-	100	84.325	ENSDARG00000098367	srp54	100	84.325	Danio_rerio
ENSPEMG00000019634	-	100	86.905	ENSDNOG00000032525	SRP54	100	86.905	Dasypus_novemcinctus
ENSPEMG00000019634	-	93	80.510	ENSDORG00000005159	-	96	81.944	Dipodomys_ordii
ENSPEMG00000019634	-	93	81.481	FBgn0010747	Srp54k	86	81.481	Drosophila_melanogaster
ENSPEMG00000019634	-	100	85.714	ENSETEG00000016307	-	100	85.714	Echinops_telfairi
ENSPEMG00000019634	-	82	49.877	ENSETEG00000012102	-	99	49.877	Echinops_telfairi
ENSPEMG00000019634	-	100	76.190	ENSEBUG00000009437	-	100	76.190	Eptatretus_burgeri
ENSPEMG00000019634	-	100	86.905	ENSEASG00005002057	SRP54	100	86.905	Equus_asinus_asinus
ENSPEMG00000019634	-	99	86.546	ENSECAG00000018042	SRP54	98	86.546	Equus_caballus
ENSPEMG00000019634	-	100	70.635	ENSEEUG00000001511	SRP54	100	70.635	Erinaceus_europaeus
ENSPEMG00000019634	-	100	83.730	ENSELUG00000003395	srp54	100	83.730	Esox_lucius
ENSPEMG00000019634	-	100	86.706	ENSFCAG00000032033	SRP54	100	86.706	Felis_catus
ENSPEMG00000019634	-	100	86.508	ENSFALG00000005995	SRP54	100	86.508	Ficedula_albicollis
ENSPEMG00000019634	-	100	86.905	ENSFDAG00000016767	SRP54	100	86.905	Fukomys_damarensis
ENSPEMG00000019634	-	100	83.532	ENSFHEG00000004263	srp54	100	83.532	Fundulus_heteroclitus
ENSPEMG00000019634	-	95	77.615	ENSGMOG00000011391	srp54	100	77.615	Gadus_morhua
ENSPEMG00000019634	-	100	86.508	ENSGALG00000023135	SRP54	100	86.508	Gallus_gallus
ENSPEMG00000019634	-	100	84.127	ENSGAFG00000011586	srp54	100	84.127	Gambusia_affinis
ENSPEMG00000019634	-	100	83.532	ENSGACG00000004181	srp54	100	83.532	Gasterosteus_aculeatus
ENSPEMG00000019634	-	100	86.905	ENSGAGG00000014766	SRP54	100	86.905	Gopherus_agassizii
ENSPEMG00000019634	-	100	86.905	ENSGGOG00000002926	SRP54	100	86.905	Gorilla_gorilla
ENSPEMG00000019634	-	100	84.127	ENSHBUG00000005678	srp54	100	84.127	Haplochromis_burtoni
ENSPEMG00000019634	-	100	86.905	ENSHGLG00000002850	SRP54	100	86.905	Heterocephalus_glaber_female
ENSPEMG00000019634	-	100	61.066	ENSHGLG00100007281	-	100	61.066	Heterocephalus_glaber_male
ENSPEMG00000019634	-	100	86.905	ENSHGLG00100005263	SRP54	100	86.905	Heterocephalus_glaber_male
ENSPEMG00000019634	-	100	82.143	ENSHCOG00000021127	srp54	100	82.143	Hippocampus_comes
ENSPEMG00000019634	-	100	83.532	ENSIPUG00000001420	srp54	100	83.532	Ictalurus_punctatus
ENSPEMG00000019634	-	100	86.905	ENSSTOG00000016023	SRP54	100	86.905	Ictidomys_tridecemlineatus
ENSPEMG00000019634	-	100	89.353	ENSJJAG00000013417	-	100	89.353	Jaculus_jaculus
ENSPEMG00000019634	-	86	64.151	ENSJJAG00000016404	-	100	64.151	Jaculus_jaculus
ENSPEMG00000019634	-	100	83.532	ENSKMAG00000007707	srp54	100	83.532	Kryptolebias_marmoratus
ENSPEMG00000019634	-	100	83.929	ENSLBEG00000018690	srp54	100	83.929	Labrus_bergylta
ENSPEMG00000019634	-	100	83.929	ENSLBEG00000021122	srp54	100	83.929	Labrus_bergylta
ENSPEMG00000019634	-	100	84.325	ENSLACG00000017890	SRP54	100	84.325	Latimeria_chalumnae
ENSPEMG00000019634	-	100	84.921	ENSLOCG00000009440	srp54	100	84.921	Lepisosteus_oculatus
ENSPEMG00000019634	-	100	86.905	ENSLAFG00000012007	SRP54	100	86.905	Loxodonta_africana
ENSPEMG00000019634	-	100	86.905	ENSMFAG00000044371	SRP54	100	86.905	Macaca_fascicularis
ENSPEMG00000019634	-	100	86.905	ENSMMUG00000015073	FAM177A1	100	86.905	Macaca_mulatta
ENSPEMG00000019634	-	100	86.905	ENSMNEG00000006947	SRP54	100	86.905	Macaca_nemestrina
ENSPEMG00000019634	-	100	86.905	ENSMLEG00000042251	SRP54	100	86.905	Mandrillus_leucophaeus
ENSPEMG00000019634	-	100	84.127	ENSMAMG00000004803	srp54	100	84.127	Mastacembelus_armatus
ENSPEMG00000019634	-	100	84.127	ENSMZEG00005027528	srp54	100	84.127	Maylandia_zebra
ENSPEMG00000019634	-	100	81.818	ENSMGAG00000012481	SRP54	100	81.818	Meleagris_gallopavo
ENSPEMG00000019634	-	100	87.103	ENSMAUG00000014447	-	100	87.103	Mesocricetus_auratus
ENSPEMG00000019634	-	100	86.905	ENSMICG00000010270	SRP54	100	86.905	Microcebus_murinus
ENSPEMG00000019634	-	86	85.227	ENSMOCG00000000948	-	100	85.227	Microtus_ochrogaster
ENSPEMG00000019634	-	93	79.458	ENSMMOG00000020303	srp54	97	82.619	Mola_mola
ENSPEMG00000019634	-	100	86.706	ENSMODG00000012925	-	100	86.706	Monodelphis_domestica
ENSPEMG00000019634	-	100	86.706	ENSMODG00000023150	-	100	86.706	Monodelphis_domestica
ENSPEMG00000019634	-	93	80.361	ENSMALG00000009163	srp54	99	82.774	Monopterus_albus
ENSPEMG00000019634	-	100	87.103	MGP_CAROLIEiJ_G0017754	-	100	87.103	Mus_caroli
ENSPEMG00000019634	-	100	87.103	ENSMUSG00000112449	Srp54b	92	95.238	Mus_musculus
ENSPEMG00000019634	-	100	87.103	ENSMUSG00000073079	Srp54a	100	100.000	Mus_musculus
ENSPEMG00000019634	-	100	86.310	ENSMUSG00000079108	Srp54c	100	86.310	Mus_musculus
ENSPEMG00000019634	-	100	87.103	MGP_PahariEiJ_G0029510	-	100	87.103	Mus_pahari
ENSPEMG00000019634	-	100	86.905	ENSMPUG00000016302	SRP54	100	86.905	Mustela_putorius_furo
ENSPEMG00000019634	-	100	86.905	ENSMLUG00000008958	SRP54	100	86.905	Myotis_lucifugus
ENSPEMG00000019634	-	100	77.183	ENSNGAG00000019806	-	100	77.183	Nannospalax_galili
ENSPEMG00000019634	-	86	82.045	ENSNBRG00000006000	srp54	100	82.045	Neolamprologus_brichardi
ENSPEMG00000019634	-	100	86.905	ENSNLEG00000003496	SRP54	100	86.905	Nomascus_leucogenys
ENSPEMG00000019634	-	67	100.000	ENSMEUG00000000138	-	76	100.000	Notamacropus_eugenii
ENSPEMG00000019634	-	53	89.474	ENSOPRG00000014502	-	52	89.474	Ochotona_princeps
ENSPEMG00000019634	-	100	86.905	ENSODEG00000004865	SRP54	100	86.905	Octodon_degus
ENSPEMG00000019634	-	100	84.127	ENSONIG00000011768	srp54	100	84.127	Oreochromis_niloticus
ENSPEMG00000019634	-	100	86.905	ENSOANG00000014051	SRP54	100	86.905	Ornithorhynchus_anatinus
ENSPEMG00000019634	-	100	86.879	ENSOCUG00000007838	SRP54	100	86.879	Oryctolagus_cuniculus
ENSPEMG00000019634	-	100	83.929	ENSORLG00000010027	srp54	100	83.929	Oryzias_latipes
ENSPEMG00000019634	-	100	83.929	ENSORLG00020001878	srp54	100	83.929	Oryzias_latipes_hni
ENSPEMG00000019634	-	100	83.929	ENSORLG00015021866	srp54	100	83.929	Oryzias_latipes_hsok
ENSPEMG00000019634	-	100	83.730	ENSOMEG00000020952	srp54	100	83.730	Oryzias_melastigma
ENSPEMG00000019634	-	100	86.905	ENSOGAG00000012188	SRP54	100	86.905	Otolemur_garnettii
ENSPEMG00000019634	-	100	86.905	ENSOARG00000007160	SRP54	100	86.905	Ovis_aries
ENSPEMG00000019634	-	100	86.905	ENSPPAG00000017434	SRP54	100	86.905	Pan_paniscus
ENSPEMG00000019634	-	100	85.714	ENSPPRG00000014047	SRP54	100	85.714	Panthera_pardus
ENSPEMG00000019634	-	100	86.706	ENSPTIG00000000744	SRP54	96	86.706	Panthera_tigris_altaica
ENSPEMG00000019634	-	100	86.905	ENSPTRG00000006259	FAM177A1	100	86.905	Pan_troglodytes
ENSPEMG00000019634	-	100	86.905	ENSPANG00000023853	SRP54	100	86.905	Papio_anubis
ENSPEMG00000019634	-	100	83.929	ENSPKIG00000001953	srp54	100	83.929	Paramormyrops_kingsleyae
ENSPEMG00000019634	-	100	86.706	ENSPSIG00000006476	SRP54	100	86.706	Pelodiscus_sinensis
ENSPEMG00000019634	-	97	78.091	ENSPMGG00000004127	srp54	97	83.221	Periophthalmus_magnuspinnatus
ENSPEMG00000019634	-	100	77.579	ENSPMAG00000006078	-	100	77.579	Petromyzon_marinus
ENSPEMG00000019634	-	100	86.706	ENSPCIG00000016175	SRP54	100	86.706	Phascolarctos_cinereus
ENSPEMG00000019634	-	100	84.127	ENSPFOG00000008870	srp54	100	84.127	Poecilia_formosa
ENSPEMG00000019634	-	100	84.127	ENSPLAG00000009889	srp54	100	84.127	Poecilia_latipinna
ENSPEMG00000019634	-	100	84.127	ENSPMEG00000008601	srp54	100	84.127	Poecilia_mexicana
ENSPEMG00000019634	-	100	84.127	ENSPREG00000004505	srp54	100	84.127	Poecilia_reticulata
ENSPEMG00000019634	-	100	81.746	ENSPPYG00000005739	SRP54	100	81.746	Pongo_abelii
ENSPEMG00000019634	-	100	82.738	ENSPCAG00000006268	SRP54	100	82.738	Procavia_capensis
ENSPEMG00000019634	-	100	84.950	ENSPCOG00000022473	SRP54	100	84.950	Propithecus_coquereli
ENSPEMG00000019634	-	62	100.000	ENSPVAG00000010056	SRP54	76	100.000	Pteropus_vampyrus
ENSPEMG00000019634	-	100	84.127	ENSPNYG00000009717	srp54	100	84.127	Pundamilia_nyererei
ENSPEMG00000019634	-	100	84.127	ENSPNAG00000008544	srp54	100	84.127	Pygocentrus_nattereri
ENSPEMG00000019634	-	100	86.905	ENSRNOG00000032776	Srp54a	100	86.905	Rattus_norvegicus
ENSPEMG00000019634	-	100	86.905	ENSRROG00000041292	SRP54	100	86.905	Rhinopithecus_roxellana
ENSPEMG00000019634	-	99	45.283	YPR088C	SRP54	95	43.762	Saccharomyces_cerevisiae
ENSPEMG00000019634	-	94	86.076	ENSSBOG00000035145	SRP54	100	86.076	Saimiri_boliviensis_boliviensis
ENSPEMG00000019634	-	66	80.758	ENSSHAG00000000671	SRP54	100	80.758	Sarcophilus_harrisii
ENSPEMG00000019634	-	100	84.325	ENSSFOG00015013920	srp54	100	84.325	Scleropages_formosus
ENSPEMG00000019634	-	100	100.000	ENSSMAG00000002441	srp54	89	100.000	Scophthalmus_maximus
ENSPEMG00000019634	-	100	83.929	ENSSDUG00000018586	srp54	100	83.929	Seriola_dumerili
ENSPEMG00000019634	-	100	83.730	ENSSLDG00000010476	srp54	100	83.730	Seriola_lalandi_dorsalis
ENSPEMG00000019634	-	100	86.905	ENSSARG00000002744	SRP54	100	86.905	Sorex_araneus
ENSPEMG00000019634	-	100	86.905	ENSSPUG00000013101	SRP54	100	86.905	Sphenodon_punctatus
ENSPEMG00000019634	-	100	83.929	ENSSPAG00000002354	srp54	100	83.929	Stegastes_partitus
ENSPEMG00000019634	-	100	86.905	ENSSSCG00000001955	SRP54	100	86.905	Sus_scrofa
ENSPEMG00000019634	-	94	85.654	ENSTGUG00000011945	-	95	85.654	Taeniopygia_guttata
ENSPEMG00000019634	-	100	83.135	ENSTRUG00000007057	srp54	100	83.135	Takifugu_rubripes
ENSPEMG00000019634	-	100	82.411	ENSTNIG00000002589	srp54	100	82.411	Tetraodon_nigroviridis
ENSPEMG00000019634	-	86	98.127	ENSTBEG00000011409	SRP54	86	98.127	Tupaia_belangeri
ENSPEMG00000019634	-	100	77.183	ENSTTRG00000000928	SRP54	100	77.183	Tursiops_truncatus
ENSPEMG00000019634	-	64	99.237	ENSUAMG00000012385	SRP54	100	99.237	Ursus_americanus
ENSPEMG00000019634	-	100	86.905	ENSUMAG00000011234	SRP54	100	86.905	Ursus_maritimus
ENSPEMG00000019634	-	94	86.258	ENSVPAG00000005668	SRP54	100	86.258	Vicugna_pacos
ENSPEMG00000019634	-	100	86.905	ENSVVUG00000019962	SRP54	100	86.905	Vulpes_vulpes
ENSPEMG00000019634	-	100	74.184	ENSXETG00000012290	srp54	100	70.898	Xenopus_tropicalis
ENSPEMG00000019634	-	93	80.813	ENSXCOG00000004658	srp54	97	83.408	Xiphophorus_couchianus
ENSPEMG00000019634	-	100	84.127	ENSXMAG00000018315	srp54	100	84.127	Xiphophorus_maculatus