EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000020357 (Gene tree)
Gene ID: 102928928
Gene Symbol: -
Alias: -
Full Name: cold shock domain containing E1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 40179 bases
Position: chrKI615463.1:1050814-1090992
Accession: 102928928
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000023261	CSD	PF00313.22	1.8e-85	1	5
ENSPEMP00000023261	CSD	PF00313.22	1.8e-85	2	5
ENSPEMP00000023261	CSD	PF00313.22	1.8e-85	3	5
ENSPEMP00000023261	CSD	PF00313.22	1.8e-85	4	5
ENSPEMP00000023261	CSD	PF00313.22	1.8e-85	5	5
ENSPEMP00000023260	CSD	PF00313.22	3.9e-69	1	4
ENSPEMP00000023260	CSD	PF00313.22	3.9e-69	2	4
ENSPEMP00000023260	CSD	PF00313.22	3.9e-69	3	4
ENSPEMP00000023260	CSD	PF00313.22	3.9e-69	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000027630	-	3052	-	ENSPEMP00000023260	668 (aa)	-	-
ENSPEMT00000027631	-	2443	XM_006980789	ENSPEMP00000023261	798 (aa)	XP_006980851	UPI00077DE7BE

Gene Model

Click here to download ENSPEMG00000020357's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000020357's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000020357	-	100	91.916	ENSPEMG00000007631	-	99	91.916

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000020357	-	100	98.802	ENSG00000009307	CSDE1	100	100.000	Homo_sapiens
ENSPEMG00000020357	-	100	76.453	ENSAPOG00000015538	csde1	99	76.453	Acanthochromis_polyacanthus
ENSPEMG00000020357	-	100	97.455	ENSAMEG00000017129	CSDE1	93	97.455	Ailuropoda_melanoleuca
ENSPEMG00000020357	-	91	76.757	ENSACIG00000015175	csde1	100	76.757	Amphilophus_citrinellus
ENSPEMG00000020357	-	100	76.453	ENSAOCG00000011510	csde1	99	76.453	Amphiprion_ocellaris
ENSPEMG00000020357	-	100	77.029	ENSAPEG00000007194	csde1	99	76.462	Amphiprion_percula
ENSPEMG00000020357	-	100	76.006	ENSATEG00000003864	csde1	99	76.006	Anabas_testudineus
ENSPEMG00000020357	-	100	90.569	ENSAPLG00000008797	CSDE1	99	90.569	Anas_platyrhynchos
ENSPEMG00000020357	-	100	91.855	ENSACAG00000003120	CSDE1	100	91.855	Anolis_carolinensis
ENSPEMG00000020357	-	100	98.503	ENSANAG00000024665	CSDE1	95	98.503	Aotus_nancymaae
ENSPEMG00000020357	-	92	73.050	ENSANAG00000028396	-	91	73.810	Aotus_nancymaae
ENSPEMG00000020357	-	100	76.625	ENSACLG00000013296	csde1	100	76.625	Astatotilapia_calliptera
ENSPEMG00000020357	-	100	75.744	ENSAMXG00000007436	csde1	100	73.691	Astyanax_mexicanus
ENSPEMG00000020357	-	100	98.503	ENSBTAG00000000678	CSDE1	99	98.503	Bos_taurus
ENSPEMG00000020357	-	100	98.503	ENSCJAG00000012565	CSDE1	95	98.371	Callithrix_jacchus
ENSPEMG00000020357	-	98	98.469	ENSCAFG00000009618	CSDE1	93	98.469	Canis_familiaris
ENSPEMG00000020357	-	100	98.503	ENSCAFG00020000481	CSDE1	99	98.503	Canis_lupus_dingo
ENSPEMG00000020357	-	100	98.503	ENSCHIG00000017250	CSDE1	99	98.503	Capra_hircus
ENSPEMG00000020357	-	100	98.496	ENSTSYG00000003747	CSDE1	100	98.496	Carlito_syrichta
ENSPEMG00000020357	-	100	92.982	ENSCAPG00000015128	CSDE1	100	92.982	Cavia_aperea
ENSPEMG00000020357	-	100	93.734	ENSCPOG00000040388	CSDE1	100	93.734	Cavia_porcellus
ENSPEMG00000020357	-	100	98.503	ENSCCAG00000036794	CSDE1	100	98.371	Cebus_capucinus
ENSPEMG00000020357	-	96	76.238	ENSCCAG00000033677	-	99	76.010	Cebus_capucinus
ENSPEMG00000020357	-	99	73.719	ENSCCAG00000030878	-	91	73.719	Cebus_capucinus
ENSPEMG00000020357	-	100	98.802	ENSCATG00000036962	CSDE1	98	98.812	Cercocebus_atys
ENSPEMG00000020357	-	100	98.872	ENSCLAG00000006618	CSDE1	100	98.872	Chinchilla_lanigera
ENSPEMG00000020357	-	100	98.622	ENSCSAG00000001658	CSDE1	95	98.622	Chlorocebus_sabaeus
ENSPEMG00000020357	-	100	99.387	ENSCHOG00000000918	CSDE1	85	99.387	Choloepus_hoffmanni
ENSPEMG00000020357	-	100	92.105	ENSCPBG00000016547	CSDE1	100	92.105	Chrysemys_picta_bellii
ENSPEMG00000020357	-	98	41.968	ENSCING00000014465	-	96	42.665	Ciona_intestinalis
ENSPEMG00000020357	-	96	42.131	ENSCSAVG00000008100	-	98	42.131	Ciona_savignyi
ENSPEMG00000020357	-	100	98.802	ENSCANG00000035096	CSDE1	98	98.812	Colobus_angolensis_palliatus
ENSPEMG00000020357	-	100	92.870	ENSCANG00000031069	-	100	92.870	Colobus_angolensis_palliatus
ENSPEMG00000020357	-	100	80.689	ENSCGRG00001014011	-	100	79.323	Cricetulus_griseus_chok1gshd
ENSPEMG00000020357	-	100	99.749	ENSCGRG00001016833	-	100	99.749	Cricetulus_griseus_chok1gshd
ENSPEMG00000020357	-	100	79.389	ENSCGRG00000005831	-	99	79.389	Cricetulus_griseus_crigri
ENSPEMG00000020357	-	99	99.777	ENSCGRG00000002225	-	100	99.777	Cricetulus_griseus_crigri
ENSPEMG00000020357	-	100	75.970	ENSCSEG00000002620	csde1	100	73.875	Cynoglossus_semilaevis
ENSPEMG00000020357	-	100	76.250	ENSCVAG00000001344	csde1	100	76.025	Cyprinodon_variegatus
ENSPEMG00000020357	-	100	77.528	ENSDARG00000074758	csde1	98	84.252	Danio_rerio
ENSPEMG00000020357	-	100	98.057	ENSDNOG00000010287	-	92	98.057	Dasypus_novemcinctus
ENSPEMG00000020357	-	100	98.496	ENSDORG00000011609	Csde1	100	98.496	Dipodomys_ordii
ENSPEMG00000020357	-	97	47.644	FBgn0263352	Unr	73	48.795	Drosophila_melanogaster
ENSPEMG00000020357	-	90	68.212	ENSETEG00000007109	-	99	68.212	Echinops_telfairi
ENSPEMG00000020357	-	93	98.347	ENSETEG00000002491	-	74	98.347	Echinops_telfairi
ENSPEMG00000020357	-	89	85.366	ENSETEG00000006280	-	99	85.366	Echinops_telfairi
ENSPEMG00000020357	-	99	76.912	ENSETEG00000013678	-	99	73.400	Echinops_telfairi
ENSPEMG00000020357	-	99	57.037	ENSEBUG00000008647	csde1	99	54.048	Eptatretus_burgeri
ENSPEMG00000020357	-	100	98.802	ENSEASG00005006284	CSDE1	100	98.747	Equus_asinus_asinus
ENSPEMG00000020357	-	100	98.802	ENSECAG00000020885	CSDE1	100	98.747	Equus_caballus
ENSPEMG00000020357	-	92	97.906	ENSEEUG00000006286	CSDE1	68	97.906	Erinaceus_europaeus
ENSPEMG00000020357	-	100	74.184	ENSELUG00000015507	csde1	99	74.184	Esox_lucius
ENSPEMG00000020357	-	100	98.802	ENSFCAG00000029266	CSDE1	99	98.802	Felis_catus
ENSPEMG00000020357	-	100	91.729	ENSFALG00000003407	CSDE1	100	91.729	Ficedula_albicollis
ENSPEMG00000020357	-	100	98.622	ENSFDAG00000007882	CSDE1	100	98.622	Fukomys_damarensis
ENSPEMG00000020357	-	100	76.404	ENSFHEG00000010799	csde1	100	76.404	Fundulus_heteroclitus
ENSPEMG00000020357	-	99	76.721	ENSGMOG00000012731	csde1	100	76.721	Gadus_morhua
ENSPEMG00000020357	-	98	91.688	ENSGALG00000002139	CSDE1	98	91.688	Gallus_gallus
ENSPEMG00000020357	-	91	74.686	ENSGAFG00000005241	csde1	94	74.686	Gambusia_affinis
ENSPEMG00000020357	-	99	77.125	ENSGACG00000004544	csde1	100	77.125	Gasterosteus_aculeatus
ENSPEMG00000020357	-	100	91.729	ENSGAGG00000017685	CSDE1	100	91.729	Gopherus_agassizii
ENSPEMG00000020357	-	100	98.802	ENSGGOG00000002164	CSDE1	99	98.802	Gorilla_gorilla
ENSPEMG00000020357	-	100	76.119	ENSHBUG00000020315	csde1	99	76.119	Haplochromis_burtoni
ENSPEMG00000020357	-	99	85.866	ENSHGLG00000007471	-	97	85.866	Heterocephalus_glaber_female
ENSPEMG00000020357	-	100	82.456	ENSHGLG00000019549	-	100	82.456	Heterocephalus_glaber_female
ENSPEMG00000020357	-	100	87.874	ENSHGLG00000003829	-	99	87.874	Heterocephalus_glaber_female
ENSPEMG00000020357	-	99	89.532	ENSHGLG00000010039	-	100	89.532	Heterocephalus_glaber_female
ENSPEMG00000020357	-	100	89.072	ENSHGLG00000008555	-	100	89.072	Heterocephalus_glaber_female
ENSPEMG00000020357	-	99	80.176	ENSHGLG00000000650	-	99	80.176	Heterocephalus_glaber_female
ENSPEMG00000020357	-	100	89.223	ENSHGLG00000009620	-	100	89.474	Heterocephalus_glaber_female
ENSPEMG00000020357	-	100	78.625	ENSHGLG00100001846	-	99	78.625	Heterocephalus_glaber_male
ENSPEMG00000020357	-	99	84.481	ENSHGLG00100002245	-	99	84.481	Heterocephalus_glaber_male
ENSPEMG00000020357	-	93	83.981	ENSHGLG00100004195	-	99	83.981	Heterocephalus_glaber_male
ENSPEMG00000020357	-	99	82.979	ENSHGLG00100007287	-	97	82.979	Heterocephalus_glaber_male
ENSPEMG00000020357	-	99	82.183	ENSHGLG00100004833	-	100	82.183	Heterocephalus_glaber_male
ENSPEMG00000020357	-	100	82.335	ENSHGLG00100012072	-	100	82.448	Heterocephalus_glaber_male
ENSPEMG00000020357	-	99	89.310	ENSHGLG00100006910	-	100	89.310	Heterocephalus_glaber_male
ENSPEMG00000020357	-	100	98.872	ENSHGLG00100019438	-	100	98.872	Heterocephalus_glaber_male
ENSPEMG00000020357	-	100	75.750	ENSHCOG00000004158	csde1	99	75.224	Hippocampus_comes
ENSPEMG00000020357	-	100	76.190	ENSIPUG00000000355	csde1	100	73.441	Ictalurus_punctatus
ENSPEMG00000020357	-	99	83.133	ENSSTOG00000030994	-	100	80.397	Ictidomys_tridecemlineatus
ENSPEMG00000020357	-	86	82.661	ENSSTOG00000032722	-	98	82.661	Ictidomys_tridecemlineatus
ENSPEMG00000020357	-	100	98.997	ENSJJAG00000019571	Csde1	100	98.997	Jaculus_jaculus
ENSPEMG00000020357	-	100	76.273	ENSKMAG00000005685	csde1	100	76.020	Kryptolebias_marmoratus
ENSPEMG00000020357	-	100	76.602	ENSLBEG00000014770	csde1	99	76.602	Labrus_bergylta
ENSPEMG00000020357	-	100	79.653	ENSLACG00000018452	CSDE1	94	79.653	Latimeria_chalumnae
ENSPEMG00000020357	-	100	79.725	ENSLOCG00000010413	csde1	94	79.725	Lepisosteus_oculatus
ENSPEMG00000020357	-	100	96.856	ENSLAFG00000007150	CSDE1	95	96.856	Loxodonta_africana
ENSPEMG00000020357	-	100	98.802	ENSMFAG00000003674	CSDE1	99	98.802	Macaca_fascicularis
ENSPEMG00000020357	-	100	98.802	ENSMMUG00000001974	CSDE1	99	98.802	Macaca_mulatta
ENSPEMG00000020357	-	100	98.802	ENSMNEG00000045247	CSDE1	98	98.812	Macaca_nemestrina
ENSPEMG00000020357	-	100	98.503	ENSMLEG00000038673	CSDE1	95	98.371	Mandrillus_leucophaeus
ENSPEMG00000020357	-	100	77.049	ENSMAMG00000008821	csde1	99	77.049	Mastacembelus_armatus
ENSPEMG00000020357	-	100	76.625	ENSMZEG00005021675	csde1	99	76.119	Maylandia_zebra
ENSPEMG00000020357	-	100	90.284	ENSMGAG00000016381	CSDE1	98	91.560	Meleagris_gallopavo
ENSPEMG00000020357	-	100	99.749	ENSMAUG00000014031	Csde1	100	99.749	Mesocricetus_auratus
ENSPEMG00000020357	-	100	97.904	ENSMICG00000002050	CSDE1	99	98.438	Microcebus_murinus
ENSPEMG00000020357	-	100	99.749	ENSMOCG00000018960	Csde1	100	99.749	Microtus_ochrogaster
ENSPEMG00000020357	-	100	76.602	ENSMMOG00000015075	csde1	100	74.532	Mola_mola
ENSPEMG00000020357	-	100	95.614	ENSMODG00000004685	CSDE1	100	95.614	Monodelphis_domestica
ENSPEMG00000020357	-	100	76.602	ENSMALG00000007132	csde1	100	74.407	Monopterus_albus
ENSPEMG00000020357	-	100	99.499	MGP_CAROLIEiJ_G0025444	Csde1	100	99.499	Mus_caroli
ENSPEMG00000020357	-	100	99.624	ENSMUSG00000068823	Csde1	100	99.624	Mus_musculus
ENSPEMG00000020357	-	100	99.875	MGP_PahariEiJ_G0026888	Csde1	100	99.875	Mus_pahari
ENSPEMG00000020357	-	100	99.875	MGP_SPRETEiJ_G0026394	Csde1	100	99.875	Mus_spretus
ENSPEMG00000020357	-	98	98.723	ENSMPUG00000005753	CSDE1	99	98.921	Mustela_putorius_furo
ENSPEMG00000020357	-	100	97.904	ENSMLUG00000005681	CSDE1	94	97.904	Myotis_lucifugus
ENSPEMG00000020357	-	100	99.373	ENSNGAG00000021929	Csde1	100	99.373	Nannospalax_galili
ENSPEMG00000020357	-	99	71.269	ENSNGAG00000012599	-	100	71.269	Nannospalax_galili
ENSPEMG00000020357	-	100	76.119	ENSNBRG00000020808	csde1	99	76.119	Neolamprologus_brichardi
ENSPEMG00000020357	-	100	98.653	ENSNLEG00000004842	CSDE1	96	98.653	Nomascus_leucogenys
ENSPEMG00000020357	-	98	97.087	ENSMEUG00000002677	CSDE1	96	97.087	Notamacropus_eugenii
ENSPEMG00000020357	-	98	96.117	ENSOPRG00000005002	CSDE1	76	96.117	Ochotona_princeps
ENSPEMG00000020357	-	100	98.246	ENSODEG00000007383	-	100	98.246	Octodon_degus
ENSPEMG00000020357	-	98	67.920	ENSODEG00000005979	-	98	67.920	Octodon_degus
ENSPEMG00000020357	-	99	76.126	ENSONIG00000009309	csde1	99	76.126	Oreochromis_niloticus
ENSPEMG00000020357	-	100	79.676	ENSOANG00000003346	-	100	79.676	Ornithorhynchus_anatinus
ENSPEMG00000020357	-	100	97.904	ENSOCUG00000016438	CSDE1	95	97.870	Oryctolagus_cuniculus
ENSPEMG00000020357	-	100	76.418	ENSORLG00000000707	csde1	100	74.969	Oryzias_latipes
ENSPEMG00000020357	-	100	76.750	ENSORLG00020005148	csde1	100	74.969	Oryzias_latipes_hni
ENSPEMG00000020357	-	100	76.750	ENSORLG00015019415	csde1	100	74.969	Oryzias_latipes_hsok
ENSPEMG00000020357	-	100	77.278	ENSOMEG00000015656	csde1	100	75.488	Oryzias_melastigma
ENSPEMG00000020357	-	100	98.802	ENSOGAG00000012127	CSDE1	94	98.802	Otolemur_garnettii
ENSPEMG00000020357	-	100	98.653	ENSOARG00000020034	CSDE1	94	98.653	Ovis_aries
ENSPEMG00000020357	-	100	98.802	ENSPPAG00000025861	CSDE1	99	98.802	Pan_paniscus
ENSPEMG00000020357	-	100	98.802	ENSPPRG00000006747	CSDE1	95	98.747	Panthera_pardus
ENSPEMG00000020357	-	100	98.802	ENSPTIG00000015468	CSDE1	100	98.747	Panthera_tigris_altaica
ENSPEMG00000020357	-	100	98.802	ENSPTRG00000033721	CSDE1	100	98.622	Pan_troglodytes
ENSPEMG00000020357	-	100	98.802	ENSPANG00000018873	CSDE1	99	98.802	Papio_anubis
ENSPEMG00000020357	-	100	76.269	ENSPKIG00000009459	csde1	100	74.000	Paramormyrops_kingsleyae
ENSPEMG00000020357	-	96	95.133	ENSPSIG00000003823	CSDE1	96	95.133	Pelodiscus_sinensis
ENSPEMG00000020357	-	100	76.155	ENSPMGG00000000772	csde1	99	76.155	Periophthalmus_magnuspinnatus
ENSPEMG00000020357	-	100	95.739	ENSPCIG00000022587	CSDE1	100	95.739	Phascolarctos_cinereus
ENSPEMG00000020357	-	99	75.378	ENSPFOG00000012664	csde1	100	75.621	Poecilia_formosa
ENSPEMG00000020357	-	97	70.814	ENSPLAG00000017680	csde1	93	70.814	Poecilia_latipinna
ENSPEMG00000020357	-	98	70.713	ENSPMEG00000005094	csde1	96	70.713	Poecilia_mexicana
ENSPEMG00000020357	-	100	75.776	ENSPREG00000011631	csde1	100	73.709	Poecilia_reticulata
ENSPEMG00000020357	-	100	98.496	ENSPPYG00000000996	CSDE1	100	98.496	Pongo_abelii
ENSPEMG00000020357	-	100	98.257	ENSPCAG00000014368	CSDE1	90	98.257	Procavia_capensis
ENSPEMG00000020357	-	100	98.653	ENSPCOG00000017893	CSDE1	100	98.496	Propithecus_coquereli
ENSPEMG00000020357	-	90	84.328	ENSPCOG00000008223	-	90	84.328	Propithecus_coquereli
ENSPEMG00000020357	-	100	91.467	ENSPVAG00000008225	CSDE1	94	91.467	Pteropus_vampyrus
ENSPEMG00000020357	-	100	76.119	ENSPNYG00000013745	csde1	99	76.119	Pundamilia_nyererei
ENSPEMG00000020357	-	100	76.779	ENSPNAG00000001958	csde1	100	74.157	Pygocentrus_nattereri
ENSPEMG00000020357	-	100	99.749	ENSRNOG00000061058	Csde1	100	99.749	Rattus_norvegicus
ENSPEMG00000020357	-	100	92.741	ENSRBIG00000038966	-	94	92.741	Rhinopithecus_bieti
ENSPEMG00000020357	-	99	97.235	ENSRBIG00000038088	-	99	97.235	Rhinopithecus_bieti
ENSPEMG00000020357	-	100	98.802	ENSRROG00000043101	CSDE1	98	98.578	Rhinopithecus_roxellana
ENSPEMG00000020357	-	100	98.503	ENSSBOG00000035592	CSDE1	95	98.371	Saimiri_boliviensis_boliviensis
ENSPEMG00000020357	-	100	95.210	ENSSHAG00000009831	CSDE1	99	95.210	Sarcophilus_harrisii
ENSPEMG00000020357	-	100	76.269	ENSSFOG00015007498	csde1	100	76.617	Scleropages_formosus
ENSPEMG00000020357	-	100	77.198	ENSSMAG00000007203	csde1	99	77.211	Scophthalmus_maximus
ENSPEMG00000020357	-	100	76.602	ENSSDUG00000015380	csde1	99	76.602	Seriola_dumerili
ENSPEMG00000020357	-	100	77.029	ENSSLDG00000008819	csde1	100	77.029	Seriola_lalandi_dorsalis
ENSPEMG00000020357	-	100	97.605	ENSSARG00000000738	CSDE1	93	97.605	Sorex_araneus
ENSPEMG00000020357	-	100	91.479	ENSSPUG00000008714	CSDE1	100	91.479	Sphenodon_punctatus
ENSPEMG00000020357	-	100	76.904	ENSSPAG00000000716	csde1	99	76.304	Stegastes_partitus
ENSPEMG00000020357	-	100	98.952	ENSSSCG00000006752	CSDE1	99	98.952	Sus_scrofa
ENSPEMG00000020357	-	100	90.750	ENSTGUG00000000972	CSDE1	100	90.750	Taeniopygia_guttata
ENSPEMG00000020357	-	100	73.433	ENSTRUG00000007996	csde1	99	73.433	Takifugu_rubripes
ENSPEMG00000020357	-	93	80.989	ENSTNIG00000010878	csde1	100	80.989	Tetraodon_nigroviridis
ENSPEMG00000020357	-	93	98.718	ENSTBEG00000011880	-	62	98.718	Tupaia_belangeri
ENSPEMG00000020357	-	100	98.054	ENSTTRG00000015583	CSDE1	94	98.054	Tursiops_truncatus
ENSPEMG00000020357	-	89	93.814	ENSUAMG00000024289	-	99	89.264	Ursus_americanus
ENSPEMG00000020357	-	89	99.349	ENSUAMG00000021779	-	100	99.035	Ursus_americanus
ENSPEMG00000020357	-	99	98.812	ENSUMAG00000011714	-	99	98.812	Ursus_maritimus
ENSPEMG00000020357	-	100	92.216	ENSUMAG00000009720	-	94	92.216	Ursus_maritimus
ENSPEMG00000020357	-	100	97.872	ENSVPAG00000000749	CSDE1	79	97.183	Vicugna_pacos
ENSPEMG00000020357	-	90	98.246	ENSVVUG00000009890	CSDE1	94	98.246	Vulpes_vulpes
ENSPEMG00000020357	-	100	85.393	ENSXETG00000021448	csde1	100	85.393	Xenopus_tropicalis
ENSPEMG00000020357	-	92	85.455	ENSXCOG00000000035	csde1	85	85.455	Xiphophorus_couchianus
ENSPEMG00000020357	-	100	77.000	ENSXMAG00000009080	csde1	99	76.006	Xiphophorus_maculatus