EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPEMG00000020389 (Gene tree)
Gene ID
102904458
Gene Symbol
Smarca4
Alias
-
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Peromyscus_maniculatus_bairdii
Status
putative
Strand
Plus strand
Length
93938 bases
Position
chrKI615492.1:1426586-1520523
Accession
102904458
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPEMP00000023314ResIIIPF04851.151.7e-0911
ENSPEMP00000023315ResIIIPF04851.151.8e-0911
ENSPEMP00000023314BRKPF07533.161.3e-1711
ENSPEMP00000023315BRKPF07533.161.4e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPEMT00000027685-4995-ENSPEMP000000233151664 (aa)--
ENSPEMT00000027684-5440XM_006982327ENSPEMP000000233141617 (aa)XP_006982389UPI00042A9EE6
Gene Model
Click here to download ENSPEMG00000020389's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000020389's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPEMG00000020389Smarca49178.555ENSPEMG00000019821Smarca29378.058
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPEMG00000020389Smarca410099.258ENSG00000127616SMARCA410099.345Homo_sapiens
ENSPEMG00000020389Smarca49583.696ENSAPOG00000004542SMARCA49883.313Acanthochromis_polyacanthus
ENSPEMG00000020389Smarca47587.724ENSAPOG00000003509smarca4a9985.050Acanthochromis_polyacanthus
ENSPEMG00000020389Smarca410094.875ENSAMEG00000010868SMARCA410094.875Ailuropoda_melanoleuca
ENSPEMG00000020389Smarca49787.391ENSACIG00000021550smarca4a9886.884Amphilophus_citrinellus
ENSPEMG00000020389Smarca49486.531ENSAOCG00000009450-9787.090Amphiprion_ocellaris
ENSPEMG00000020389Smarca48985.645ENSAOCG00000019167smarca4a10085.941Amphiprion_ocellaris
ENSPEMG00000020389Smarca410082.861ENSAPEG00000023108-9983.028Amphiprion_percula
ENSPEMG00000020389Smarca48985.714ENSAPEG00000015559smarca4a10086.010Amphiprion_percula
ENSPEMG00000020389Smarca49983.293ENSATEG00000001094-9589.474Anabas_testudineus
ENSPEMG00000020389Smarca410087.044ENSATEG00000011524smarca4a10087.173Anabas_testudineus
ENSPEMG00000020389Smarca49998.821ENSANAG00000036991SMARCA49997.129Aotus_nancymaae
ENSPEMG00000020389Smarca49788.228ENSACLG00000000163smarca4a9887.640Astatotilapia_calliptera
ENSPEMG00000020389Smarca49583.698ENSACLG00000008638-9882.814Astatotilapia_calliptera
ENSPEMG00000020389Smarca49782.732ENSAMXG00000021023smarca4a8388.786Astyanax_mexicanus
ENSPEMG00000020389Smarca49486.948ENSAMXG00000011238-9886.680Astyanax_mexicanus
ENSPEMG00000020389Smarca410098.268ENSBTAG00000019220SMARCA410098.268Bos_taurus
ENSPEMG00000020389Smarca49997.129ENSCJAG00000005936SMARCA49997.129Callithrix_jacchus
ENSPEMG00000020389Smarca410099.072ENSCAFG00000017584SMARCA410099.072Canis_familiaris
ENSPEMG00000020389Smarca410099.072ENSCAFG00020024620SMARCA49999.072Canis_lupus_dingo
ENSPEMG00000020389Smarca410093.827ENSCHIG00000015318SMARCA410093.827Capra_hircus
ENSPEMG00000020389Smarca410098.765ENSTSYG00000012966SMARCA410098.765Carlito_syrichta
ENSPEMG00000020389Smarca49488.391ENSCAPG00000015932SMARCA49694.732Cavia_aperea
ENSPEMG00000020389Smarca410098.454ENSCPOG00000015549SMARCA410098.454Cavia_porcellus
ENSPEMG00000020389Smarca410095.141ENSCCAG00000031660SMARCA49995.141Cebus_capucinus
ENSPEMG00000020389Smarca410099.072ENSCATG00000029530SMARCA410099.072Cercocebus_atys
ENSPEMG00000020389Smarca410098.083ENSCLAG00000011946SMARCA410098.083Chinchilla_lanigera
ENSPEMG00000020389Smarca410096.784ENSCPBG00000009994SMARCA410096.784Chrysemys_picta_bellii
ENSPEMG00000020389Smarca410099.072ENSCANG00000036013SMARCA410099.072Colobus_angolensis_palliatus
ENSPEMG00000020389Smarca410099.629ENSCGRG00001016732Smarca410099.629Cricetulus_griseus_chok1gshd
ENSPEMG00000020389Smarca410099.629ENSCGRG00000017242Smarca410099.629Cricetulus_griseus_crigri
ENSPEMG00000020389Smarca49686.570ENSCSEG00000014771smarca4a10086.618Cynoglossus_semilaevis
ENSPEMG00000020389Smarca49983.938ENSCVAG00000003018-9884.375Cyprinodon_variegatus
ENSPEMG00000020389Smarca49786.537ENSCVAG00000006979smarca4a9986.366Cyprinodon_variegatus
ENSPEMG00000020389Smarca410086.764ENSDARG00000077226smarca4a10087.007Danio_rerio
ENSPEMG00000020389Smarca49283.841ENSDARG00000104339SMARCA49584.231Danio_rerio
ENSPEMG00000020389Smarca410089.651ENSDNOG00000048847SMARCA49398.525Dasypus_novemcinctus
ENSPEMG00000020389Smarca48492.489ENSDORG00000002544Smarca49192.489Dipodomys_ordii
ENSPEMG00000020389Smarca49388.810ENSETEG00000013361SMARCA49488.810Echinops_telfairi
ENSPEMG00000020389Smarca410098.639ENSEASG00005006167SMARCA410096.667Equus_asinus_asinus
ENSPEMG00000020389Smarca410098.701ENSECAG00000008334SMARCA410098.701Equus_caballus
ENSPEMG00000020389Smarca49978.299ENSELUG00000023232-9385.638Esox_lucius
ENSPEMG00000020389Smarca410086.301ENSELUG00000010247smarca4a10084.490Esox_lucius
ENSPEMG00000020389Smarca410099.258ENSFCAG00000004894SMARCA410099.258Felis_catus
ENSPEMG00000020389Smarca47497.487ENSFALG00000004208SMARCA49391.733Ficedula_albicollis
ENSPEMG00000020389Smarca49298.515ENSFDAG00000012237SMARCA49798.515Fukomys_damarensis
ENSPEMG00000020389Smarca410083.838ENSFHEG00000007902-9884.476Fundulus_heteroclitus
ENSPEMG00000020389Smarca49686.073ENSFHEG00000010182smarca4a10086.364Fundulus_heteroclitus
ENSPEMG00000020389Smarca49280.667ENSGMOG00000005756-8580.222Gadus_morhua
ENSPEMG00000020389Smarca49380.000ENSGMOG00000002649smarca4a8781.529Gadus_morhua
ENSPEMG00000020389Smarca47396.701ENSGALG00000047145SMARCA410096.701Gallus_gallus
ENSPEMG00000020389Smarca49088.377ENSGAFG00000014900smarca4a9988.008Gambusia_affinis
ENSPEMG00000020389Smarca49981.461ENSGAFG00000008827-9881.750Gambusia_affinis
ENSPEMG00000020389Smarca49885.634ENSGACG00000006691smarca4a10085.246Gasterosteus_aculeatus
ENSPEMG00000020389Smarca49980.470ENSGACG00000016033-9979.054Gasterosteus_aculeatus
ENSPEMG00000020389Smarca410096.722ENSGAGG00000016757SMARCA410096.722Gopherus_agassizii
ENSPEMG00000020389Smarca410099.072ENSGGOG00000009882SMARCA410099.072Gorilla_gorilla
ENSPEMG00000020389Smarca410087.165ENSHBUG00000021172smarca4a10087.165Haplochromis_burtoni
ENSPEMG00000020389Smarca410083.622ENSHBUG00000005447-9982.876Haplochromis_burtoni
ENSPEMG00000020389Smarca410098.519ENSHGLG00000010519SMARCA410098.519Heterocephalus_glaber_female
ENSPEMG00000020389Smarca410097.344ENSHGLG00100013774SMARCA410097.344Heterocephalus_glaber_male
ENSPEMG00000020389Smarca49586.052ENSHCOG00000009510smarca4a9686.381Hippocampus_comes
ENSPEMG00000020389Smarca49884.283ENSIPUG00000016346-9883.552Ictalurus_punctatus
ENSPEMG00000020389Smarca410087.789ENSIPUG00000006107smarca4a10087.789Ictalurus_punctatus
ENSPEMG00000020389Smarca410099.011ENSSTOG00000007939SMARCA410099.011Ictidomys_tridecemlineatus
ENSPEMG00000020389Smarca49999.024ENSJJAG00000012877Smarca49999.024Jaculus_jaculus
ENSPEMG00000020389Smarca410082.629ENSKMAG00000019518-9887.047Kryptolebias_marmoratus
ENSPEMG00000020389Smarca410085.723ENSKMAG00000011931smarca4a10086.028Kryptolebias_marmoratus
ENSPEMG00000020389Smarca49585.548ENSLBEG00000017383smarca4a7788.550Labrus_bergylta
ENSPEMG00000020389Smarca49582.764ENSLBEG00000020655-8182.609Labrus_bergylta
ENSPEMG00000020389Smarca45288.425ENSLACG00000015309SMARCA410088.038Latimeria_chalumnae
ENSPEMG00000020389Smarca410087.670ENSLOCG00000007820smarca4a7992.211Lepisosteus_oculatus
ENSPEMG00000020389Smarca410099.258ENSLAFG00000001433SMARCA410099.258Loxodonta_africana
ENSPEMG00000020389Smarca410099.072ENSMFAG00000032146SMARCA49999.072Macaca_fascicularis
ENSPEMG00000020389Smarca410099.072ENSMMUG00000012042SMARCA410099.072Macaca_mulatta
ENSPEMG00000020389Smarca410098.887ENSMNEG00000028512SMARCA410098.887Macaca_nemestrina
ENSPEMG00000020389Smarca410099.196ENSMLEG00000034976SMARCA410099.196Mandrillus_leucophaeus
ENSPEMG00000020389Smarca49982.653ENSMAMG00000002841-9886.567Mastacembelus_armatus
ENSPEMG00000020389Smarca410086.938ENSMAMG00000009256smarca4a10086.877Mastacembelus_armatus
ENSPEMG00000020389Smarca410087.173ENSMZEG00005003889smarca4a10086.930Maylandia_zebra
ENSPEMG00000020389Smarca49485.817ENSMZEG00005023861-9883.511Maylandia_zebra
ENSPEMG00000020389Smarca410099.691ENSMAUG00000020731Smarca410099.691Mesocricetus_auratus
ENSPEMG00000020389Smarca410099.258ENSMICG00000009806SMARCA410099.258Microcebus_murinus
ENSPEMG00000020389Smarca410099.876ENSMOCG00000022209Smarca410099.876Microtus_ochrogaster
ENSPEMG00000020389Smarca49585.093ENSMMOG00000007571smarca4a9885.431Mola_mola
ENSPEMG00000020389Smarca49998.110ENSMODG00000006287SMARCA49998.110Monodelphis_domestica
ENSPEMG00000020389Smarca49686.877ENSMALG00000003388smarca4a10086.792Monopterus_albus
ENSPEMG00000020389Smarca48983.218ENSMALG00000021534-8390.052Monopterus_albus
ENSPEMG00000020389Smarca410099.691MGP_CAROLIEiJ_G0031879Smarca410099.691Mus_caroli
ENSPEMG00000020389Smarca410099.876ENSMUSG00000032187Smarca410099.876Mus_musculus
ENSPEMG00000020389Smarca410099.258MGP_PahariEiJ_G0014745Smarca410099.258Mus_pahari
ENSPEMG00000020389Smarca410099.691MGP_SPRETEiJ_G0033003Smarca410099.691Mus_spretus
ENSPEMG00000020389Smarca410099.072ENSMPUG00000005711SMARCA410099.072Mustela_putorius_furo
ENSPEMG00000020389Smarca410098.949ENSMLUG00000004491-10098.949Myotis_lucifugus
ENSPEMG00000020389Smarca410098.578ENSNGAG00000021852Smarca410098.578Nannospalax_galili
ENSPEMG00000020389Smarca49585.983ENSNBRG00000011457smarca4a9685.936Neolamprologus_brichardi
ENSPEMG00000020389Smarca410092.831ENSNLEG00000012389SMARCA49893.350Nomascus_leucogenys
ENSPEMG00000020389Smarca48093.103ENSOPRG00000000885-7893.103Ochotona_princeps
ENSPEMG00000020389Smarca410095.276ENSODEG00000017127SMARCA48497.614Octodon_degus
ENSPEMG00000020389Smarca410083.682ENSONIG00000018040-10082.936Oreochromis_niloticus
ENSPEMG00000020389Smarca410087.978ENSONIG00000008196smarca4a10087.823Oreochromis_niloticus
ENSPEMG00000020389Smarca49990.553ENSOCUG00000001787SMARCA49990.553Oryctolagus_cuniculus
ENSPEMG00000020389Smarca49685.850ENSORLG00000015452smarca4a10085.453Oryzias_latipes
ENSPEMG00000020389Smarca49583.448ENSORLG00000003955-9787.306Oryzias_latipes
ENSPEMG00000020389Smarca49583.459ENSORLG00020009728-9787.489Oryzias_latipes_hni
ENSPEMG00000020389Smarca410085.497ENSORLG00020004611smarca4a10085.436Oryzias_latipes_hni
ENSPEMG00000020389Smarca410085.619ENSORLG00015016560smarca4a10085.575Oryzias_latipes_hsok
ENSPEMG00000020389Smarca49983.092ENSORLG00015007739-9983.055Oryzias_latipes_hsok
ENSPEMG00000020389Smarca410086.280ENSOMEG00000007486smarca4a10086.663Oryzias_melastigma
ENSPEMG00000020389Smarca49683.168ENSOMEG00000016626-9983.224Oryzias_melastigma
ENSPEMG00000020389Smarca48996.959ENSOGAG00000016148SMARCA410096.959Otolemur_garnettii
ENSPEMG00000020389Smarca410097.219ENSOARG00000017454SMARCA410097.219Ovis_aries
ENSPEMG00000020389Smarca410099.072ENSPPAG00000043191SMARCA410099.072Pan_paniscus
ENSPEMG00000020389Smarca410099.258ENSPPRG00000000064SMARCA410099.258Panthera_pardus
ENSPEMG00000020389Smarca410099.072ENSPTRG00000010488SMARCA410099.072Pan_troglodytes
ENSPEMG00000020389Smarca410099.011ENSPANG00000011042SMARCA49999.011Papio_anubis
ENSPEMG00000020389Smarca49886.179ENSPKIG00000010087-9886.859Paramormyrops_kingsleyae
ENSPEMG00000020389Smarca410087.621ENSPKIG00000007770SMARCA410087.743Paramormyrops_kingsleyae
ENSPEMG00000020389Smarca410090.436ENSPSIG00000005547SMARCA49990.725Pelodiscus_sinensis
ENSPEMG00000020389Smarca410098.145ENSPCIG00000017138SMARCA410098.145Phascolarctos_cinereus
ENSPEMG00000020389Smarca410085.021ENSPFOG00000007892smarca4a10086.217Poecilia_formosa
ENSPEMG00000020389Smarca410083.373ENSPFOG00000012930-9983.224Poecilia_formosa
ENSPEMG00000020389Smarca48289.572ENSPLAG00000018616-8190.015Poecilia_latipinna
ENSPEMG00000020389Smarca410085.082ENSPLAG00000014294smarca4a10086.278Poecilia_latipinna
ENSPEMG00000020389Smarca49585.960ENSPMEG00000003725smarca4a9787.029Poecilia_mexicana
ENSPEMG00000020389Smarca49984.250ENSPMEG00000008929-9884.438Poecilia_mexicana
ENSPEMG00000020389Smarca49486.524ENSPREG00000014823-9784.000Poecilia_reticulata
ENSPEMG00000020389Smarca49785.089ENSPREG00000014608smarca4a10086.155Poecilia_reticulata
ENSPEMG00000020389Smarca49999.085ENSPPYG00000009568SMARCA49999.085Pongo_abelii
ENSPEMG00000020389Smarca47999.338ENSPCAG00000014054SMARCA47799.338Procavia_capensis
ENSPEMG00000020389Smarca410099.196ENSPCOG00000023011SMARCA410099.196Propithecus_coquereli
ENSPEMG00000020389Smarca49597.928ENSPVAG00000007787SMARCA49697.928Pteropus_vampyrus
ENSPEMG00000020389Smarca49786.041ENSPNYG00000000717smarca4a9687.524Pundamilia_nyererei
ENSPEMG00000020389Smarca49586.419ENSPNAG00000006636-9786.172Pygocentrus_nattereri
ENSPEMG00000020389Smarca410099.629ENSRNOG00000009271Smarca410099.629Rattus_norvegicus
ENSPEMG00000020389Smarca410099.011ENSRBIG00000038696SMARCA49999.011Rhinopithecus_bieti
ENSPEMG00000020389Smarca410099.072ENSRROG00000045509SMARCA410099.072Rhinopithecus_roxellana
ENSPEMG00000020389Smarca410098.639ENSSBOG00000026896SMARCA49998.822Saimiri_boliviensis_boliviensis
ENSPEMG00000020389Smarca410098.145ENSSHAG00000001642SMARCA410098.145Sarcophilus_harrisii
ENSPEMG00000020389Smarca49681.175ENSSFOG00015009921-9190.661Scleropages_formosus
ENSPEMG00000020389Smarca410088.114ENSSFOG00015013823smarca410086.970Scleropages_formosus
ENSPEMG00000020389Smarca410085.473ENSSMAG00000003200smarca4a10085.232Scophthalmus_maximus
ENSPEMG00000020389Smarca410081.548ENSSMAG00000014082-9981.462Scophthalmus_maximus
ENSPEMG00000020389Smarca49985.697ENSSDUG00000005388-9586.555Seriola_dumerili
ENSPEMG00000020389Smarca410083.323ENSSDUG00000017298smarca4a10083.537Seriola_dumerili
ENSPEMG00000020389Smarca49586.866ENSSLDG00000023663-9787.273Seriola_lalandi_dorsalis
ENSPEMG00000020389Smarca410086.558ENSSLDG00000024486smarca4a10086.223Seriola_lalandi_dorsalis
ENSPEMG00000020389Smarca46498.765ENSSARG00000013477SMARCA48598.765Sorex_araneus
ENSPEMG00000020389Smarca49592.163ENSSPUG00000004558SMARCA49891.979Sphenodon_punctatus
ENSPEMG00000020389Smarca410086.136ENSSPAG00000004248smarca4a10085.829Stegastes_partitus
ENSPEMG00000020389Smarca410083.077ENSSPAG00000012533-9982.742Stegastes_partitus
ENSPEMG00000020389Smarca410099.258ENSSSCG00000013629SMARCA410099.258Sus_scrofa
ENSPEMG00000020389Smarca45290.166ENSTGUG00000015488-10089.474Taeniopygia_guttata
ENSPEMG00000020389Smarca48981.156ENSTRUG00000004885smarca4a10081.101Takifugu_rubripes
ENSPEMG00000020389Smarca49581.290ENSTRUG00000001378SMARCA49882.776Takifugu_rubripes
ENSPEMG00000020389Smarca47384.912ENSTNIG00000004859-10084.561Tetraodon_nigroviridis
ENSPEMG00000020389Smarca410081.796ENSTNIG00000004536SMARCA410083.181Tetraodon_nigroviridis
ENSPEMG00000020389Smarca49997.317ENSTTRG00000009519SMARCA49997.317Tursiops_truncatus
ENSPEMG00000020389Smarca410099.134ENSUAMG00000014661SMARCA410099.134Ursus_americanus
ENSPEMG00000020389Smarca410096.908ENSUMAG00000022005SMARCA49999.123Ursus_maritimus
ENSPEMG00000020389Smarca410099.072ENSVVUG00000017820SMARCA49799.072Vulpes_vulpes
ENSPEMG00000020389Smarca410086.303ENSXETG00000009355smarca49987.292Xenopus_tropicalis
ENSPEMG00000020389Smarca410086.167ENSXMAG00000006321smarca4a10086.427Xiphophorus_maculatus
ENSPEMG00000020389Smarca410084.022ENSXMAG00000007030-9983.632Xiphophorus_maculatus

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