EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSPEMG00000020545 (Gene tree)
Gene ID: 102920328
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein A1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 1762 bases
Position: chrKI615540.1:5556624-5558385
Accession: 102920328
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000023534	RRM_1	PF00076.22	1.9e-36	1	2
ENSPEMP00000023534	RRM_1	PF00076.22	1.9e-36	2	2
ENSPEMP00000023534	HnRNPA1	PF11627.8	1.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000027908	-	1377	XM_006984278	ENSPEMP00000023534	320 (aa)	XP_006984340	UPI0000000C3B

Gene Model

Click here to download ENSPEMG00000020545's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000020545's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000020545	-	55	41.176	ENSPEMG00000023987	Hnrnpab	67	41.176
ENSPEMG00000020545	-	60	42.105	ENSPEMG00000012411	Rbm3	56	40.230
ENSPEMG00000020545	-	57	44.118	ENSPEMG00000014804	Hnrnpd	56	41.758
ENSPEMG00000020545	-	61	80.102	ENSPEMG00000014669	-	87	61.424
ENSPEMG00000020545	-	100	71.250	ENSPEMG00000008607	-	100	65.938
ENSPEMG00000020545	-	65	56.585	ENSPEMG00000020274	Hnrnpa0	70	59.551
ENSPEMG00000020545	-	55	38.372	ENSPEMG00000016545	-	59	38.235
ENSPEMG00000020545	-	53	46.087	ENSPEMG00000021793	-	100	46.087
ENSPEMG00000020545	-	100	96.308	ENSPEMG00000011252	-	100	96.308
ENSPEMG00000020545	-	61	85.714	ENSPEMG00000021885	Hnrnpa3	95	77.273
ENSPEMG00000020545	-	93	85.603	ENSPEMG00000011977	-	93	82.759
ENSPEMG00000020545	-	86	71.014	ENSPEMG00000014384	Hnrnpa2b1	94	63.438
ENSPEMG00000020545	-	100	85.404	ENSPEMG00000003344	-	94	87.086
ENSPEMG00000020545	-	60	82.383	ENSPEMG00000007388	-	53	85.393
ENSPEMG00000020545	-	88	95.374	ENSPEMG00000012402	-	100	95.374