EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPEMG00000020671 (Gene tree)
Gene ID
102921998
Gene Symbol
Pabpc1l
Alias
-
Full Name
poly(A) binding protein cytoplasmic 1 like
Gene Type
protein_coding
Species
Peromyscus_maniculatus_bairdii
Status
putative
Strand
Minus strand
Length
24842 bases
Position
chrKI615325.1:1243489-1268330
Accession
102921998
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPEMP00000023709PABPPF00658.184.2e-2411
ENSPEMP00000023709RRM_5PF13893.64.4e-1613
ENSPEMP00000023709RRM_5PF13893.64.4e-1623
ENSPEMP00000023709RRM_5PF13893.64.4e-1633
ENSPEMP00000023709RRM_1PF00076.221.1e-9114
ENSPEMP00000023709RRM_1PF00076.221.1e-9124
ENSPEMP00000023709RRM_1PF00076.221.1e-9134
ENSPEMP00000023709RRM_1PF00076.221.1e-9144
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPEMT00000028083-2075XM_006971073ENSPEMP00000023709609 (aa)XP_006971135UPI00042AD592
Gene Model
Click here to download ENSPEMG00000020671's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000020671's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPEMG00000020671Pabpc1l9958.692ENSPEMG00000011901Pabpc69859.164
ENSPEMG00000020671Pabpc1l9957.987ENSPEMG00000013149Pabpc29857.075
ENSPEMG00000020671Pabpc1l9858.211ENSPEMG00000024193-9758.537
ENSPEMG00000020671Pabpc1l6134.615ENSPEMG00000017568Sf3b46035.028
ENSPEMG00000020671Pabpc1l5834.118ENSPEMG00000001184Celf36633.333
ENSPEMG00000020671Pabpc1l6333.735ENSPEMG00000021782Elavl49930.921
ENSPEMG00000020671Pabpc1l6357.865ENSPEMG00000000171Pabpc59557.939
ENSPEMG00000020671Pabpc1l5630.864ENSPEMG00000020274Hnrnpa06031.613
ENSPEMG00000020671Pabpc1l5243.038ENSPEMG00000012411Rbm36343.038
ENSPEMG00000020671Pabpc1l9860.390ENSPEMG00000023569-9760.000
ENSPEMG00000020671Pabpc1l6130.435ENSPEMG00000014538Tial17830.435
ENSPEMG00000020671Pabpc1l6066.467ENSPEMG00000017399-9566.860
ENSPEMG00000020671Pabpc1l6066.467ENSPEMG00000014159-9566.860
ENSPEMG00000020671Pabpc1l9961.094ENSPEMG00000014998Pabpc19860.918
ENSPEMG00000020671Pabpc1l6432.877ENSPEMG00000018058Rbm197432.877
ENSPEMG00000020671Pabpc1l6358.889ENSPEMG00000012565Pabpc4l9758.889
ENSPEMG00000020671Pabpc1l6134.940ENSPEMG00000014101Elavl28834.940
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPEMG00000020671Pabpc1l9976.797ENSG00000101104PABPC1L9985.185Homo_sapiens
ENSPEMG00000020671Pabpc1l9859.554ENSAPOG00000010842pabpc1l9859.455Acanthochromis_polyacanthus
ENSPEMG00000020671Pabpc1l9868.837ENSAMEG00000004099PABPC1L9968.603Ailuropoda_melanoleuca
ENSPEMG00000020671Pabpc1l9965.358ENSACIG00000021004-9965.358Amphilophus_citrinellus
ENSPEMG00000020671Pabpc1l9859.429ENSAOCG00000006167-9959.271Amphiprion_ocellaris
ENSPEMG00000020671Pabpc1l9967.064ENSAPEG00000010558-9774.752Amphiprion_percula
ENSPEMG00000020671Pabpc1l9961.760ENSATEG00000007428pabpc1l9961.851Anabas_testudineus
ENSPEMG00000020671Pabpc1l9865.595ENSAPLG00000008415PABPC1L9964.960Anas_platyrhynchos
ENSPEMG00000020671Pabpc1l9964.744ENSACAG00000011841PABPC1L9864.263Anolis_carolinensis
ENSPEMG00000020671Pabpc1l9975.980ENSANAG00000026826PABPC1L9975.121Aotus_nancymaae
ENSPEMG00000020671Pabpc1l9958.991ENSACLG00000024791pabpc1l9958.360Astatotilapia_calliptera
ENSPEMG00000020671Pabpc1l9961.815ENSAMXG00000013552pabpc1l9961.321Astyanax_mexicanus
ENSPEMG00000020671Pabpc1l6767.376ENSBTAG00000016849PABPC1L8467.376Bos_taurus
ENSPEMG00000020671Pabpc1l5987.500ENSBTAG00000055300-10087.500Bos_taurus
ENSPEMG00000020671Pabpc1l9976.307ENSCJAG00000017628PABPC1L9974.839Callithrix_jacchus
ENSPEMG00000020671Pabpc1l6070.690ENSCJAG00000038506-10070.690Callithrix_jacchus
ENSPEMG00000020671Pabpc1l9866.977ENSCAFG00000009573PABPC1L9966.874Canis_familiaris
ENSPEMG00000020671Pabpc1l9976.013ENSCAFG00020013828PABPC1L9975.243Canis_lupus_dingo
ENSPEMG00000020671Pabpc1l9973.463ENSCHIG00000025759PABPC1L9373.290Capra_hircus
ENSPEMG00000020671Pabpc1l9975.817ENSTSYG00000006645PABPC1L9975.817Carlito_syrichta
ENSPEMG00000020671Pabpc1l9975.422ENSCAPG00000014519PABPC1L9975.422Cavia_aperea
ENSPEMG00000020671Pabpc1l9976.346ENSCPOG00000013633PABPC1L9976.346Cavia_porcellus
ENSPEMG00000020671Pabpc1l9976.144ENSCCAG00000023338PABPC1L9975.614Cebus_capucinus
ENSPEMG00000020671Pabpc1l9977.288ENSCATG00000034065PABPC1L9976.596Cercocebus_atys
ENSPEMG00000020671Pabpc1l9976.020ENSCLAG00000005298PABPC1L9976.998Chinchilla_lanigera
ENSPEMG00000020671Pabpc1l9977.451ENSCSAG00000014242PABPC1L9976.759Chlorocebus_sabaeus
ENSPEMG00000020671Pabpc1l7274.434ENSCPBG00000017755-9974.434Chrysemys_picta_bellii
ENSPEMG00000020671Pabpc1l6274.242ENSCPBG00000007810-8374.242Chrysemys_picta_bellii
ENSPEMG00000020671Pabpc1l9744.711ENSCING00000002796-9746.281Ciona_intestinalis
ENSPEMG00000020671Pabpc1l9854.315ENSCSAVG00000003102-10077.397Ciona_savignyi
ENSPEMG00000020671Pabpc1l9855.408ENSCSAVG00000004246-9754.400Ciona_savignyi
ENSPEMG00000020671Pabpc1l9973.269ENSCANG00000037530PABPC1L9973.108Colobus_angolensis_palliatus
ENSPEMG00000020671Pabpc1l9993.421ENSCGRG00001021938Pabpc1l9993.421Cricetulus_griseus_chok1gshd
ENSPEMG00000020671Pabpc1l9993.421ENSCGRG00000007946Pabpc1l9993.421Cricetulus_griseus_crigri
ENSPEMG00000020671Pabpc1l9959.204ENSCSEG00000021295pabpc1l9859.204Cynoglossus_semilaevis
ENSPEMG00000020671Pabpc1l9861.812ENSCVAG00000015943-9978.030Cyprinodon_variegatus
ENSPEMG00000020671Pabpc1l9961.440ENSDARG00000002597pabpc1l8878.462Danio_rerio
ENSPEMG00000020671Pabpc1l9976.307ENSDNOG00000048450PABPC1L9976.307Dasypus_novemcinctus
ENSPEMG00000020671Pabpc1l9978.084ENSDORG00000001067Pabpc1l9978.084Dipodomys_ordii
ENSPEMG00000020671Pabpc1l9483.333ENSETEG00000009969PABPC1L7283.333Echinops_telfairi
ENSPEMG00000020671Pabpc1l5985.714ENSEASG00005023408-10085.714Equus_asinus_asinus
ENSPEMG00000020671Pabpc1l5077.778ENSEASG00005023407-6577.778Equus_asinus_asinus
ENSPEMG00000020671Pabpc1l6970.518ENSECAG00000040139-8970.518Equus_caballus
ENSPEMG00000020671Pabpc1l9972.771ENSEEUG00000005978PABPC1L9972.771Erinaceus_europaeus
ENSPEMG00000020671Pabpc1l9961.453ENSELUG00000001811pabpc1l9960.502Esox_lucius
ENSPEMG00000020671Pabpc1l9975.689ENSFCAG00000011692PABPC1L9975.527Felis_catus
ENSPEMG00000020671Pabpc1l7970.445ENSFALG00000005372PABPC1L8370.040Ficedula_albicollis
ENSPEMG00000020671Pabpc1l9973.892ENSFDAG00000008291PABPC1L9973.563Fukomys_damarensis
ENSPEMG00000020671Pabpc1l9960.664ENSFHEG00000003398pabpc1l9959.558Fundulus_heteroclitus
ENSPEMG00000020671Pabpc1l9960.417ENSGMOG00000004437pabpc1l9959.459Gadus_morhua
ENSPEMG00000020671Pabpc1l9964.041ENSGALG00000004123PABPC1L9976.499Gallus_gallus
ENSPEMG00000020671Pabpc1l9957.887ENSGAFG00000021057pabpc1l9957.450Gambusia_affinis
ENSPEMG00000020671Pabpc1l9860.543ENSGACG00000002792pabpc1l9959.494Gasterosteus_aculeatus
ENSPEMG00000020671Pabpc1l9966.083ENSGAGG00000000589PABPC1L9865.710Gopherus_agassizii
ENSPEMG00000020671Pabpc1l9976.961ENSGGOG00000004584PABPC1L9976.797Gorilla_gorilla
ENSPEMG00000020671Pabpc1l9958.833ENSHBUG00000006134pabpc1l9958.202Haplochromis_burtoni
ENSPEMG00000020671Pabpc1l9976.672ENSHGLG00000008434PABPC1L9976.672Heterocephalus_glaber_female
ENSPEMG00000020671Pabpc1l9976.672ENSHGLG00100012151PABPC1L9976.672Heterocephalus_glaber_male
ENSPEMG00000020671Pabpc1l6175.843ENSHGLG00100019506-10075.843Heterocephalus_glaber_male
ENSPEMG00000020671Pabpc1l9860.561ENSHCOG00000009270pabpc1l9959.901Hippocampus_comes
ENSPEMG00000020671Pabpc1l6058.046ENSIPUG00000006760-8858.046Ictalurus_punctatus
ENSPEMG00000020671Pabpc1l6053.769ENSIPUG00000006780-9653.769Ictalurus_punctatus
ENSPEMG00000020671Pabpc1l5361.538ENSIPUG00000005537-10061.538Ictalurus_punctatus
ENSPEMG00000020671Pabpc1l9961.965ENSIPUG00000012602pabpc1l9961.111Ictalurus_punctatus
ENSPEMG00000020671Pabpc1l9977.614ENSSTOG00000003739PABPC1L9977.614Ictidomys_tridecemlineatus
ENSPEMG00000020671Pabpc1l9976.557ENSJJAG00000022406Pabpc1l9973.727Jaculus_jaculus
ENSPEMG00000020671Pabpc1l9961.551ENSKMAG00000016847pabpc1l9960.848Kryptolebias_marmoratus
ENSPEMG00000020671Pabpc1l9860.552ENSLBEG00000010084pabpc1l9960.552Labrus_bergylta
ENSPEMG00000020671Pabpc1l10060.896ENSLACG00000005762PABPC1L9963.158Latimeria_chalumnae
ENSPEMG00000020671Pabpc1l9862.063ENSLOCG00000007519pabpc1l9861.260Lepisosteus_oculatus
ENSPEMG00000020671Pabpc1l9973.878ENSLAFG00000003553PABPC1L10073.878Loxodonta_africana
ENSPEMG00000020671Pabpc1l9977.124ENSMFAG00000040365PABPC1L9976.432Macaca_fascicularis
ENSPEMG00000020671Pabpc1l9975.081ENSMNEG00000032298PABPC1L9974.388Macaca_nemestrina
ENSPEMG00000020671Pabpc1l9977.288ENSMLEG00000043139PABPC1L9976.596Mandrillus_leucophaeus
ENSPEMG00000020671Pabpc1l9760.912ENSMAMG00000011854pabpc1l9760.820Mastacembelus_armatus
ENSPEMG00000020671Pabpc1l9958.991ENSMZEG00005023713pabpc1l9958.360Maylandia_zebra
ENSPEMG00000020671Pabpc1l9966.242ENSMGAG00000003674PABPC1L9865.610Meleagris_gallopavo
ENSPEMG00000020671Pabpc1l9992.928ENSMOCG00000013186Pabpc1l9992.928Microtus_ochrogaster
ENSPEMG00000020671Pabpc1l9960.800ENSMMOG00000020574-9077.692Mola_mola
ENSPEMG00000020671Pabpc1l9770.364ENSMODG00000016198PABPC1L9970.333Monodelphis_domestica
ENSPEMG00000020671Pabpc1l9759.935ENSMALG00000021622pabpc1l10059.837Monopterus_albus
ENSPEMG00000020671Pabpc1l9991.269MGP_CAROLIEiJ_G0024627Pabpc1l10091.269Mus_caroli
ENSPEMG00000020671Pabpc1l9991.269ENSMUSG00000054582Pabpc1l10091.269Mus_musculus
ENSPEMG00000020671Pabpc1l9991.254MGP_PahariEiJ_G0026071Pabpc1l9991.254Mus_pahari
ENSPEMG00000020671Pabpc1l9991.433MGP_SPRETEiJ_G0025549Pabpc1l10091.433Mus_spretus
ENSPEMG00000020671Pabpc1l9973.591ENSMPUG00000017646PABPC1L9973.269Mustela_putorius_furo
ENSPEMG00000020671Pabpc1l9871.613ENSMLUG00000006324PABPC1L9771.613Myotis_lucifugus
ENSPEMG00000020671Pabpc1l9987.789ENSNGAG00000010458Pabpc1l9987.789Nannospalax_galili
ENSPEMG00000020671Pabpc1l9959.171ENSNBRG00000016633pabpc1l9967.626Neolamprologus_brichardi
ENSPEMG00000020671Pabpc1l8966.848ENSMEUG00000007905-8966.423Notamacropus_eugenii
ENSPEMG00000020671Pabpc1l9975.662ENSOPRG00000011846PABPC1L9875.497Ochotona_princeps
ENSPEMG00000020671Pabpc1l9968.301ENSODEG00000015482PABPC1L9968.586Octodon_degus
ENSPEMG00000020671Pabpc1l5870.000ENSODEG00000002920-9770.000Octodon_degus
ENSPEMG00000020671Pabpc1l9959.242ENSONIG00000017314pabpc1l9958.452Oreochromis_niloticus
ENSPEMG00000020671Pabpc1l8960.469ENSOANG00000015793-10060.469Ornithorhynchus_anatinus
ENSPEMG00000020671Pabpc1l9969.479ENSOCUG00000003005PABPC1L9968.510Oryctolagus_cuniculus
ENSPEMG00000020671Pabpc1l9760.458ENSORLG00000010322pabpc1l9866.355Oryzias_latipes
ENSPEMG00000020671Pabpc1l9760.458ENSORLG00020021193pabpc1l9866.355Oryzias_latipes_hni
ENSPEMG00000020671Pabpc1l9760.458ENSORLG00015017018pabpc1l9866.355Oryzias_latipes_hsok
ENSPEMG00000020671Pabpc1l9957.186ENSOMEG00000010789pabpc1l9956.601Oryzias_melastigma
ENSPEMG00000020671Pabpc1l9974.601ENSOGAG00000032999PABPC1L9974.441Otolemur_garnettii
ENSPEMG00000020671Pabpc1l9974.675ENSOARG00000004578PABPC1L9974.513Ovis_aries
ENSPEMG00000020671Pabpc1l9976.634ENSPPAG00000039677PABPC1L9976.471Pan_paniscus
ENSPEMG00000020671Pabpc1l6274.074ENSPPRG00000019327-9874.074Panthera_pardus
ENSPEMG00000020671Pabpc1l9976.949ENSPTIG00000006524PABPC1L9976.783Panthera_tigris_altaica
ENSPEMG00000020671Pabpc1l6684.877ENSPTRG00000013531PABPC1L9984.877Pan_troglodytes
ENSPEMG00000020671Pabpc1l9977.288ENSPANG00000018788PABPC1L9976.596Papio_anubis
ENSPEMG00000020671Pabpc1l9962.179ENSPKIG00000007322pabpc1l9961.465Paramormyrops_kingsleyae
ENSPEMG00000020671Pabpc1l5476.336ENSPKIG00000016810-9376.336Paramormyrops_kingsleyae
ENSPEMG00000020671Pabpc1l6776.513ENSPSIG00000013289PABPC1L9876.513Pelodiscus_sinensis
ENSPEMG00000020671Pabpc1l7064.249ENSPMGG00000023121-9064.249Periophthalmus_magnuspinnatus
ENSPEMG00000020671Pabpc1l6271.628ENSPMGG00000023117pabpc1l9771.628Periophthalmus_magnuspinnatus
ENSPEMG00000020671Pabpc1l9961.664ENSPFOG00000013241pabpc1l9960.582Poecilia_formosa
ENSPEMG00000020671Pabpc1l9961.031ENSPLAG00000017490-9960.582Poecilia_latipinna
ENSPEMG00000020671Pabpc1l5378.462ENSPLAG00000023686-9278.462Poecilia_latipinna
ENSPEMG00000020671Pabpc1l5378.462ENSPMEG00000009185-8878.462Poecilia_mexicana
ENSPEMG00000020671Pabpc1l9960.095ENSPMEG00000007677pabpc1l9960.454Poecilia_mexicana
ENSPEMG00000020671Pabpc1l6771.359ENSPREG00000015886pabpc1l10071.602Poecilia_reticulata
ENSPEMG00000020671Pabpc1l9977.124ENSPPYG00000011042PABPC1L9976.961Pongo_abelii
ENSPEMG00000020671Pabpc1l6378.125ENSPCAG00000011787-7578.125Procavia_capensis
ENSPEMG00000020671Pabpc1l9974.104ENSPCOG00000020630PABPC1L9974.104Propithecus_coquereli
ENSPEMG00000020671Pabpc1l9974.392ENSPVAG00000012663PABPC1L9973.864Pteropus_vampyrus
ENSPEMG00000020671Pabpc1l9958.738ENSPNYG00000004101pabpc1l9967.626Pundamilia_nyererei
ENSPEMG00000020671Pabpc1l9954.976ENSPNAG00000021248pabpc1l9954.016Pygocentrus_nattereri
ENSPEMG00000020671Pabpc1l9991.240ENSRNOG00000012750Pabpc1l9991.240Rattus_norvegicus
ENSPEMG00000020671Pabpc1l9976.961ENSRBIG00000035381PABPC1L9976.961Rhinopithecus_bieti
ENSPEMG00000020671Pabpc1l9976.797ENSRROG00000044498PABPC1L9976.797Rhinopithecus_roxellana
ENSPEMG00000020671Pabpc1l9976.144ENSSBOG00000009532-9975.777Saimiri_boliviensis_boliviensis
ENSPEMG00000020671Pabpc1l9865.112ENSSHAG00000011446PABPC1L10064.344Sarcophilus_harrisii
ENSPEMG00000020671Pabpc1l9962.816ENSSFOG00015017304pabpc1l9961.732Scleropages_formosus
ENSPEMG00000020671Pabpc1l9960.611ENSSMAG00000010516pabpc1l9877.519Scophthalmus_maximus
ENSPEMG00000020671Pabpc1l9960.287ENSSDUG00000014743pabpc1l9960.828Seriola_dumerili
ENSPEMG00000020671Pabpc1l9660.797ENSSLDG00000006981pabpc1l9468.106Seriola_lalandi_dorsalis
ENSPEMG00000020671Pabpc1l9964.547ENSSPUG00000004233PABPC1L9864.070Sphenodon_punctatus
ENSPEMG00000020671Pabpc1l9859.098ENSSPAG00000017137pabpc1l9959.432Stegastes_partitus
ENSPEMG00000020671Pabpc1l9973.779ENSSSCG00000007382PABPC1L9974.020Sus_scrofa
ENSPEMG00000020671Pabpc1l9965.211ENSTGUG00000005114PABPC1L9964.992Taeniopygia_guttata
ENSPEMG00000020671Pabpc1l9760.289ENSTRUG00000011085pabpc1l9759.968Takifugu_rubripes
ENSPEMG00000020671Pabpc1l9957.903ENSTNIG00000017903pabpc1l9857.903Tetraodon_nigroviridis
ENSPEMG00000020671Pabpc1l9484.932ENSTBEG00000002851PABPC1L7984.932Tupaia_belangeri
ENSPEMG00000020671Pabpc1l9474.182ENSTTRG00000007618PABPC1L10074.372Tursiops_truncatus
ENSPEMG00000020671Pabpc1l9972.876ENSUAMG00000017682PABPC1L9972.876Ursus_americanus
ENSPEMG00000020671Pabpc1l6783.380ENSUMAG00000025436PABPC1L9183.380Ursus_maritimus
ENSPEMG00000020671Pabpc1l9982.308ENSVVUG00000018939PABPC1L9982.308Vulpes_vulpes
ENSPEMG00000020671Pabpc1l9959.744ENSXETG00000022831pabpc1l9859.486Xenopus_tropicalis
ENSPEMG00000020671Pabpc1l9960.417ENSXCOG00000005459pabpc1l9974.468Xiphophorus_couchianus
ENSPEMG00000020671Pabpc1l9960.709ENSXMAG00000017135pabpc1l9960.032Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us