EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000020684 (Gene tree)
Gene ID: 102925611
Gene Symbol: Srbd1
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 176990 bases
Position: chrKI615614.1:2351887-2528876
Accession: 102925611
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000023726	S1	PF00575.23	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000028100	-	3021	XM_006986498	ENSPEMP00000023726	1006 (aa)	XP_006986560	-

Gene Model

Click here to download ENSPEMG00000020684's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000020684's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000020684	Srbd1	100	82.336	ENSG00000068784	SRBD1	100	82.336	Homo_sapiens
ENSPEMG00000020684	Srbd1	100	50.145	ENSAPOG00000005103	si:ch211-117n7.8	99	50.483	Acanthochromis_polyacanthus
ENSPEMG00000020684	Srbd1	100	83.121	ENSAMEG00000005993	SRBD1	100	83.121	Ailuropoda_melanoleuca
ENSPEMG00000020684	Srbd1	83	55.673	ENSACIG00000009875	si:ch211-117n7.8	85	55.787	Amphilophus_citrinellus
ENSPEMG00000020684	Srbd1	98	50.546	ENSAOCG00000024718	si:ch211-117n7.8	98	50.844	Amphiprion_ocellaris
ENSPEMG00000020684	Srbd1	97	51.400	ENSAPEG00000002645	si:ch211-117n7.8	99	51.400	Amphiprion_percula
ENSPEMG00000020684	Srbd1	84	56.214	ENSATEG00000010844	si:ch211-117n7.8	98	50.829	Anabas_testudineus
ENSPEMG00000020684	Srbd1	100	68.416	ENSAPLG00000006313	SRBD1	100	68.835	Anas_platyrhynchos
ENSPEMG00000020684	Srbd1	100	82.630	ENSANAG00000025573	SRBD1	100	82.630	Aotus_nancymaae
ENSPEMG00000020684	Srbd1	84	55.208	ENSACLG00000024219	si:ch211-117n7.8	82	55.208	Astatotilapia_calliptera
ENSPEMG00000020684	Srbd1	86	59.060	ENSAMXG00000004294	SRBD1	98	53.571	Astyanax_mexicanus
ENSPEMG00000020684	Srbd1	100	81.747	ENSBTAG00000007508	SRBD1	97	81.845	Bos_taurus
ENSPEMG00000020684	Srbd1	100	82.041	ENSCJAG00000000727	SRBD1	100	82.041	Callithrix_jacchus
ENSPEMG00000020684	Srbd1	100	83.431	ENSCAFG00000002554	SRBD1	100	83.431	Canis_familiaris
ENSPEMG00000020684	Srbd1	100	80.569	ENSCAFG00020026284	SRBD1	99	86.073	Canis_lupus_dingo
ENSPEMG00000020684	Srbd1	100	81.845	ENSCHIG00000016535	SRBD1	98	81.943	Capra_hircus
ENSPEMG00000020684	Srbd1	100	83.659	ENSTSYG00000012797	SRBD1	100	83.659	Carlito_syrichta
ENSPEMG00000020684	Srbd1	100	83.135	ENSCPOG00000004773	SRBD1	100	83.135	Cavia_porcellus
ENSPEMG00000020684	Srbd1	100	83.023	ENSCCAG00000025589	SRBD1	100	83.023	Cebus_capucinus
ENSPEMG00000020684	Srbd1	100	83.219	ENSCATG00000039530	SRBD1	100	83.219	Cercocebus_atys
ENSPEMG00000020684	Srbd1	100	83.976	ENSCLAG00000008623	SRBD1	100	83.976	Chinchilla_lanigera
ENSPEMG00000020684	Srbd1	100	83.317	ENSCSAG00000013350	SRBD1	100	83.317	Chlorocebus_sabaeus
ENSPEMG00000020684	Srbd1	86	92.994	ENSCHOG00000003805	SRBD1	87	92.994	Choloepus_hoffmanni
ENSPEMG00000020684	Srbd1	100	69.480	ENSCPBG00000005677	SRBD1	100	70.334	Chrysemys_picta_bellii
ENSPEMG00000020684	Srbd1	79	41.605	ENSCING00000005950	-	99	41.605	Ciona_intestinalis
ENSPEMG00000020684	Srbd1	80	42.184	ENSCSAVG00000000861	-	99	42.184	Ciona_savignyi
ENSPEMG00000020684	Srbd1	99	82.694	ENSCANG00000016307	SRBD1	99	82.694	Colobus_angolensis_palliatus
ENSPEMG00000020684	Srbd1	100	91.054	ENSCGRG00001000513	Srbd1	100	91.054	Cricetulus_griseus_chok1gshd
ENSPEMG00000020684	Srbd1	100	91.054	ENSCGRG00000002283	Srbd1	100	91.054	Cricetulus_griseus_crigri
ENSPEMG00000020684	Srbd1	85	54.305	ENSCSEG00000000856	si:ch211-117n7.8	85	54.420	Cynoglossus_semilaevis
ENSPEMG00000020684	Srbd1	85	55.263	ENSCVAG00000020212	si:ch211-117n7.8	95	53.746	Cyprinodon_variegatus
ENSPEMG00000020684	Srbd1	100	81.720	ENSDNOG00000018686	SRBD1	100	81.720	Dasypus_novemcinctus
ENSPEMG00000020684	Srbd1	100	82.738	ENSDORG00000010468	Srbd1	100	82.738	Dipodomys_ordii
ENSPEMG00000020684	Srbd1	79	36.098	FBgn0051156	CG31156	79	36.663	Drosophila_melanogaster
ENSPEMG00000020684	Srbd1	90	76.696	ENSETEG00000000739	SRBD1	92	77.217	Echinops_telfairi
ENSPEMG00000020684	Srbd1	73	46.871	ENSEBUG00000008902	si:ch211-117n7.8	96	46.871	Eptatretus_burgeri
ENSPEMG00000020684	Srbd1	100	80.373	ENSEASG00005003132	SRBD1	97	91.720	Equus_asinus_asinus
ENSPEMG00000020684	Srbd1	100	83.513	ENSECAG00000013865	SRBD1	98	83.513	Equus_caballus
ENSPEMG00000020684	Srbd1	86	58.219	ENSELUG00000012592	si:ch211-117n7.8	82	58.219	Esox_lucius
ENSPEMG00000020684	Srbd1	100	83.235	ENSFCAG00000005101	SRBD1	100	83.235	Felis_catus
ENSPEMG00000020684	Srbd1	100	67.421	ENSFALG00000012966	SRBD1	100	67.421	Ficedula_albicollis
ENSPEMG00000020684	Srbd1	98	83.740	ENSFDAG00000016670	SRBD1	99	83.740	Fukomys_damarensis
ENSPEMG00000020684	Srbd1	84	56.547	ENSFHEG00000019480	si:ch211-117n7.8	82	56.547	Fundulus_heteroclitus
ENSPEMG00000020684	Srbd1	51	51.204	ENSGMOG00000018010	-	100	51.204	Gadus_morhua
ENSPEMG00000020684	Srbd1	100	68.597	ENSGALG00000009990	SRBD1	100	68.793	Gallus_gallus
ENSPEMG00000020684	Srbd1	85	55.172	ENSGAFG00000019664	si:ch211-117n7.8	98	50.147	Gambusia_affinis
ENSPEMG00000020684	Srbd1	63	58.050	ENSGACG00000010794	si:ch211-117n7.8	100	58.050	Gasterosteus_aculeatus
ENSPEMG00000020684	Srbd1	84	78.103	ENSGAGG00000006166	SRBD1	99	78.103	Gopherus_agassizii
ENSPEMG00000020684	Srbd1	97	82.679	ENSGGOG00000005910	SRBD1	100	82.661	Gorilla_gorilla
ENSPEMG00000020684	Srbd1	84	48.463	ENSHBUG00000013207	si:ch211-117n7.8	97	45.021	Haplochromis_burtoni
ENSPEMG00000020684	Srbd1	99	84.791	ENSHGLG00000018153	-	99	84.791	Heterocephalus_glaber_female
ENSPEMG00000020684	Srbd1	99	84.592	ENSHGLG00100015183	-	99	84.592	Heterocephalus_glaber_male
ENSPEMG00000020684	Srbd1	85	59.096	ENSIPUG00000009661	srbd1	85	59.096	Ictalurus_punctatus
ENSPEMG00000020684	Srbd1	100	85.714	ENSSTOG00000005898	SRBD1	100	85.714	Ictidomys_tridecemlineatus
ENSPEMG00000020684	Srbd1	100	79.406	ENSJJAG00000022244	Srbd1	100	79.406	Jaculus_jaculus
ENSPEMG00000020684	Srbd1	99	49.373	ENSKMAG00000003473	si:ch211-117n7.8	99	49.373	Kryptolebias_marmoratus
ENSPEMG00000020684	Srbd1	99	50.048	ENSLBEG00000027518	si:ch211-117n7.8	99	50.048	Labrus_bergylta
ENSPEMG00000020684	Srbd1	85	68.208	ENSLACG00000009790	SRBD1	99	68.208	Latimeria_chalumnae
ENSPEMG00000020684	Srbd1	96	56.998	ENSLOCG00000016360	si:ch211-117n7.8	99	56.102	Lepisosteus_oculatus
ENSPEMG00000020684	Srbd1	100	83.219	ENSMFAG00000042026	SRBD1	100	83.219	Macaca_fascicularis
ENSPEMG00000020684	Srbd1	100	83.219	ENSMMUG00000003490	SRBD1	100	83.219	Macaca_mulatta
ENSPEMG00000020684	Srbd1	100	80.667	ENSMNEG00000034701	SRBD1	100	80.667	Macaca_nemestrina
ENSPEMG00000020684	Srbd1	100	83.023	ENSMLEG00000000745	SRBD1	100	83.023	Mandrillus_leucophaeus
ENSPEMG00000020684	Srbd1	99	48.585	ENSMAMG00000021921	si:ch211-117n7.8	99	49.366	Mastacembelus_armatus
ENSPEMG00000020684	Srbd1	84	55.208	ENSMZEG00005027369	si:ch211-117n7.8	82	55.208	Maylandia_zebra
ENSPEMG00000020684	Srbd1	80	72.749	ENSMGAG00000010273	SRBD1	100	72.749	Meleagris_gallopavo
ENSPEMG00000020684	Srbd1	79	92.050	ENSMAUG00000013916	Srbd1	99	89.354	Mesocricetus_auratus
ENSPEMG00000020684	Srbd1	100	83.710	ENSMICG00000007835	SRBD1	100	83.710	Microcebus_murinus
ENSPEMG00000020684	Srbd1	100	90.665	ENSMOCG00000018716	Srbd1	100	90.665	Microtus_ochrogaster
ENSPEMG00000020684	Srbd1	97	50.400	ENSMMOG00000007507	si:ch211-117n7.8	99	50.400	Mola_mola
ENSPEMG00000020684	Srbd1	99	48.936	ENSMALG00000001562	si:ch211-117n7.8	99	49.371	Monopterus_albus
ENSPEMG00000020684	Srbd1	100	87.276	MGP_CAROLIEiJ_G0021934	Srbd1	100	91.475	Mus_caroli
ENSPEMG00000020684	Srbd1	100	87.475	ENSMUSG00000024135	Srbd1	99	90.722	Mus_musculus
ENSPEMG00000020684	Srbd1	100	86.382	MGP_PahariEiJ_G0020924	Srbd1	100	86.382	Mus_pahari
ENSPEMG00000020684	Srbd1	100	87.674	MGP_SPRETEiJ_G0022850	Srbd1	100	87.674	Mus_spretus
ENSPEMG00000020684	Srbd1	100	79.902	ENSMLUG00000007039	SRBD1	100	79.902	Myotis_lucifugus
ENSPEMG00000020684	Srbd1	100	86.108	ENSNGAG00000011893	Srbd1	100	86.108	Nannospalax_galili
ENSPEMG00000020684	Srbd1	84	54.333	ENSNBRG00000012873	si:ch211-117n7.8	85	54.333	Neolamprologus_brichardi
ENSPEMG00000020684	Srbd1	100	82.434	ENSNLEG00000016877	SRBD1	100	82.434	Nomascus_leucogenys
ENSPEMG00000020684	Srbd1	100	81.970	ENSODEG00000012095	SRBD1	100	81.970	Octodon_degus
ENSPEMG00000020684	Srbd1	84	55.855	ENSONIG00000000945	si:ch211-117n7.8	100	55.855	Oreochromis_niloticus
ENSPEMG00000020684	Srbd1	100	84.433	ENSOCUG00000015385	SRBD1	100	84.433	Oryctolagus_cuniculus
ENSPEMG00000020684	Srbd1	98	47.864	ENSORLG00000004427	si:ch211-117n7.8	98	47.864	Oryzias_latipes
ENSPEMG00000020684	Srbd1	98	50.486	ENSORLG00020012792	si:ch211-117n7.8	98	50.973	Oryzias_latipes_hni
ENSPEMG00000020684	Srbd1	98	50.339	ENSORLG00015018598	si:ch211-117n7.8	98	50.339	Oryzias_latipes_hsok
ENSPEMG00000020684	Srbd1	84	54.482	ENSOMEG00000012229	si:ch211-117n7.8	82	55.000	Oryzias_melastigma
ENSPEMG00000020684	Srbd1	100	78.214	ENSOGAG00000001076	SRBD1	100	78.214	Otolemur_garnettii
ENSPEMG00000020684	Srbd1	100	79.864	ENSOARG00000005958	SRBD1	100	80.445	Ovis_aries
ENSPEMG00000020684	Srbd1	100	82.630	ENSPPAG00000038442	SRBD1	100	82.630	Pan_paniscus
ENSPEMG00000020684	Srbd1	100	83.137	ENSPPRG00000003449	SRBD1	100	83.137	Panthera_pardus
ENSPEMG00000020684	Srbd1	100	83.235	ENSPTIG00000012495	SRBD1	100	83.235	Panthera_tigris_altaica
ENSPEMG00000020684	Srbd1	100	82.728	ENSPTRG00000011889	SRBD1	100	82.728	Pan_troglodytes
ENSPEMG00000020684	Srbd1	100	82.924	ENSPANG00000008063	SRBD1	100	82.924	Papio_anubis
ENSPEMG00000020684	Srbd1	84	58.698	ENSPKIG00000021973	si:ch211-117n7.8	98	53.096	Paramormyrops_kingsleyae
ENSPEMG00000020684	Srbd1	100	70.088	ENSPSIG00000008992	SRBD1	100	70.577	Pelodiscus_sinensis
ENSPEMG00000020684	Srbd1	84	53.695	ENSPMGG00000013348	si:ch211-117n7.8	99	49.060	Periophthalmus_magnuspinnatus
ENSPEMG00000020684	Srbd1	99	50.390	ENSPFOG00000010650	si:ch211-117n7.8	98	50.390	Poecilia_formosa
ENSPEMG00000020684	Srbd1	99	50.242	ENSPLAG00000002141	si:ch211-117n7.8	98	50.242	Poecilia_latipinna
ENSPEMG00000020684	Srbd1	99	50.487	ENSPMEG00000018537	si:ch211-117n7.8	98	50.487	Poecilia_mexicana
ENSPEMG00000020684	Srbd1	84	55.466	ENSPREG00000003258	si:ch211-117n7.8	85	55.466	Poecilia_reticulata
ENSPEMG00000020684	Srbd1	100	78.072	ENSPPYG00000012444	SRBD1	99	78.072	Pongo_abelii
ENSPEMG00000020684	Srbd1	82	78.238	ENSPCAG00000005629	SRBD1	86	78.238	Procavia_capensis
ENSPEMG00000020684	Srbd1	100	70.841	ENSPCOG00000017669	SRBD1	100	70.841	Propithecus_coquereli
ENSPEMG00000020684	Srbd1	100	72.620	ENSPVAG00000001782	SRBD1	100	72.620	Pteropus_vampyrus
ENSPEMG00000020684	Srbd1	84	52.521	ENSPNYG00000000508	si:ch211-117n7.8	86	52.521	Pundamilia_nyererei
ENSPEMG00000020684	Srbd1	85	60.023	ENSPNAG00000013492	SRBD1	85	60.371	Pygocentrus_nattereri
ENSPEMG00000020684	Srbd1	100	86.779	ENSRNOG00000014720	Srbd1	99	86.779	Rattus_norvegicus
ENSPEMG00000020684	Srbd1	99	82.498	ENSRBIG00000033486	SRBD1	99	82.498	Rhinopithecus_bieti
ENSPEMG00000020684	Srbd1	99	82.498	ENSRROG00000041599	SRBD1	99	82.498	Rhinopithecus_roxellana
ENSPEMG00000020684	Srbd1	100	82.451	ENSSBOG00000024982	SRBD1	100	82.451	Saimiri_boliviensis_boliviensis
ENSPEMG00000020684	Srbd1	84	58.178	ENSSFOG00015001128	si:ch211-117n7.8	90	58.178	Scleropages_formosus
ENSPEMG00000020684	Srbd1	84	55.272	ENSSMAG00000018256	si:ch211-117n7.8	82	55.684	Scophthalmus_maximus
ENSPEMG00000020684	Srbd1	84	55.041	ENSSLDG00000023189	si:ch211-117n7.8	83	55.041	Seriola_lalandi_dorsalis
ENSPEMG00000020684	Srbd1	100	74.628	ENSSARG00000009740	SRBD1	100	74.628	Sorex_araneus
ENSPEMG00000020684	Srbd1	85	75.581	ENSSPUG00000010475	SRBD1	94	75.581	Sphenodon_punctatus
ENSPEMG00000020684	Srbd1	84	53.418	ENSSPAG00000008092	-	99	48.333	Stegastes_partitus
ENSPEMG00000020684	Srbd1	100	82.924	ENSSSCG00000008445	SRBD1	98	83.023	Sus_scrofa
ENSPEMG00000020684	Srbd1	84	75.235	ENSTGUG00000003878	SRBD1	100	75.235	Taeniopygia_guttata
ENSPEMG00000020684	Srbd1	99	49.391	ENSTRUG00000007080	si:ch211-117n7.8	99	49.719	Takifugu_rubripes
ENSPEMG00000020684	Srbd1	99	48.430	ENSTNIG00000007464	si:ch211-117n7.8	99	48.430	Tetraodon_nigroviridis
ENSPEMG00000020684	Srbd1	81	97.872	ENSTBEG00000004556	SRBD1	82	97.872	Tupaia_belangeri
ENSPEMG00000020684	Srbd1	94	82.028	ENSTTRG00000011871	SRBD1	94	82.321	Tursiops_truncatus
ENSPEMG00000020684	Srbd1	100	83.922	ENSUAMG00000008126	SRBD1	100	83.922	Ursus_americanus
ENSPEMG00000020684	Srbd1	100	83.431	ENSUMAG00000012902	SRBD1	98	83.431	Ursus_maritimus
ENSPEMG00000020684	Srbd1	90	84.707	ENSVPAG00000006825	SRBD1	99	84.707	Vicugna_pacos
ENSPEMG00000020684	Srbd1	100	82.924	ENSVVUG00000005389	SRBD1	100	83.415	Vulpes_vulpes
ENSPEMG00000020684	Srbd1	100	51.965	ENSXETG00000002760	srbd1	100	52.682	Xenopus_tropicalis
ENSPEMG00000020684	Srbd1	99	50.195	ENSXMAG00000016861	si:ch211-117n7.8	98	50.195	Xiphophorus_maculatus