EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000020811 (Gene tree)
Gene ID: 102911849
Gene Symbol: -
Alias: -
Full Name: squamous cell carcinoma antigen recognized by T-cells 3
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 24542 bases
Position: chrKI615795.1:11635-36176
Accession: 102911849
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000023915	Lsm_interact	PF05391.11	4.1e-06	1	1
ENSPEMP00000023915	RRM_1	PF00076.22	1.1e-34	1	2
ENSPEMP00000023915	RRM_1	PF00076.22	1.1e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000028292	-	2739	XM_006990758	ENSPEMP00000023915	912 (aa)	XP_006990820	-

Gene Model

Click here to download ENSPEMG00000020811's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000020811's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000020811	-	94	87.760	ENSG00000075856	SART3	100	95.495	Homo_sapiens
ENSPEMG00000020811	-	94	62.514	ENSAPOG00000007242	sart3	93	62.299	Acanthochromis_polyacanthus
ENSPEMG00000020811	-	94	87.370	ENSAMEG00000016374	SART3	89	86.906	Ailuropoda_melanoleuca
ENSPEMG00000020811	-	94	63.959	ENSACIG00000016452	sart3	93	64.147	Amphilophus_citrinellus
ENSPEMG00000020811	-	94	62.989	ENSAOCG00000015094	sart3	93	62.831	Amphiprion_ocellaris
ENSPEMG00000020811	-	94	62.874	ENSAPEG00000023696	sart3	93	62.716	Amphiprion_percula
ENSPEMG00000020811	-	88	63.801	ENSATEG00000009882	sart3	93	63.636	Anabas_testudineus
ENSPEMG00000020811	-	85	71.429	ENSAPLG00000006205	SART3	97	71.429	Anas_platyrhynchos
ENSPEMG00000020811	-	94	68.284	ENSACAG00000001176	SART3	89	68.468	Anolis_carolinensis
ENSPEMG00000020811	-	94	87.601	ENSANAG00000025967	SART3	90	87.138	Aotus_nancymaae
ENSPEMG00000020811	-	94	62.598	ENSACLG00000025832	sart3	93	62.332	Astatotilapia_calliptera
ENSPEMG00000020811	-	94	61.824	ENSAMXG00000019143	sart3	91	61.824	Astyanax_mexicanus
ENSPEMG00000020811	-	94	85.052	ENSBTAG00000031846	SART3	89	84.589	Bos_taurus
ENSPEMG00000020811	-	94	85.698	ENSCJAG00000015330	SART3	90	85.244	Callithrix_jacchus
ENSPEMG00000020811	-	94	87.833	ENSCAFG00000011352	SART3	80	87.370	Canis_familiaris
ENSPEMG00000020811	-	94	87.717	ENSCAFG00020022271	SART3	89	87.254	Canis_lupus_dingo
ENSPEMG00000020811	-	94	83.201	ENSCHIG00000021385	SART3	90	82.747	Capra_hircus
ENSPEMG00000020811	-	94	86.790	ENSTSYG00000013923	SART3	89	86.559	Carlito_syrichta
ENSPEMG00000020811	-	94	87.587	ENSCAPG00000013404	SART3	99	87.239	Cavia_aperea
ENSPEMG00000020811	-	94	87.601	ENSCPOG00000010969	SART3	89	87.254	Cavia_porcellus
ENSPEMG00000020811	-	94	87.949	ENSCCAG00000023667	SART3	90	87.486	Cebus_capucinus
ENSPEMG00000020811	-	94	86.312	ENSCATG00000041537	SART3	90	85.860	Cercocebus_atys
ENSPEMG00000020811	-	94	88.413	ENSCLAG00000011727	SART3	89	87.601	Chinchilla_lanigera
ENSPEMG00000020811	-	94	88.106	ENSCSAG00000002880	SART3	90	87.644	Chlorocebus_sabaeus
ENSPEMG00000020811	-	88	75.699	ENSCPBG00000006699	SART3	91	76.000	Chrysemys_picta_bellii
ENSPEMG00000020811	-	93	39.367	ENSCING00000009762	-	97	39.140	Ciona_intestinalis
ENSPEMG00000020811	-	94	86.312	ENSCANG00000000411	SART3	90	85.860	Colobus_angolensis_palliatus
ENSPEMG00000020811	-	94	95.122	ENSCGRG00001020554	Sart3	89	94.541	Cricetulus_griseus_chok1gshd
ENSPEMG00000020811	-	89	95.215	ENSCGRG00000005968	Sart3	100	94.601	Cricetulus_griseus_crigri
ENSPEMG00000020811	-	62	60.681	ENSCSEG00000011951	sart3	69	60.681	Cynoglossus_semilaevis
ENSPEMG00000020811	-	94	62.374	ENSCVAG00000022898	sart3	94	62.430	Cyprinodon_variegatus
ENSPEMG00000020811	-	94	60.913	ENSDARG00000008032	sart3	93	61.470	Danio_rerio
ENSPEMG00000020811	-	94	85.023	ENSDNOG00000019498	SART3	90	84.677	Dasypus_novemcinctus
ENSPEMG00000020811	-	94	83.449	ENSDORG00000014360	Sart3	91	83.102	Dipodomys_ordii
ENSPEMG00000020811	-	62	38.168	FBgn0014024	Rnp4F	51	38.168	Drosophila_melanogaster
ENSPEMG00000020811	-	69	92.258	ENSETEG00000011292	SART3	78	92.258	Echinops_telfairi
ENSPEMG00000020811	-	94	37.808	ENSEBUG00000005658	sart3	91	38.101	Eptatretus_burgeri
ENSPEMG00000020811	-	94	87.022	ENSEASG00005014500	SART3	89	87.022	Equus_asinus_asinus
ENSPEMG00000020811	-	94	86.906	ENSECAG00000000314	SART3	89	86.906	Equus_caballus
ENSPEMG00000020811	-	89	81.640	ENSEEUG00000002954	SART3	85	81.640	Erinaceus_europaeus
ENSPEMG00000020811	-	94	62.486	ENSELUG00000013025	sart3	94	62.486	Esox_lucius
ENSPEMG00000020811	-	94	87.486	ENSFCAG00000014041	SART3	89	87.022	Felis_catus
ENSPEMG00000020811	-	94	73.834	ENSFALG00000008894	SART3	99	73.834	Ficedula_albicollis
ENSPEMG00000020811	-	94	88.644	ENSFDAG00000014878	SART3	90	87.717	Fukomys_damarensis
ENSPEMG00000020811	-	94	61.167	ENSFHEG00000015715	sart3	94	61.093	Fundulus_heteroclitus
ENSPEMG00000020811	-	94	60.091	ENSGMOG00000017859	sart3	97	60.091	Gadus_morhua
ENSPEMG00000020811	-	94	75.261	ENSGALG00000039472	SART3	91	75.261	Gallus_gallus
ENSPEMG00000020811	-	94	60.202	ENSGAFG00000018055	sart3	93	60.449	Gambusia_affinis
ENSPEMG00000020811	-	94	60.904	ENSGACG00000008787	sart3	99	59.791	Gasterosteus_aculeatus
ENSPEMG00000020811	-	94	74.490	ENSGAGG00000016519	SART3	94	74.774	Gopherus_agassizii
ENSPEMG00000020811	-	94	87.760	ENSGGOG00000011562	SART3	90	87.298	Gorilla_gorilla
ENSPEMG00000020811	-	94	62.304	ENSHBUG00000005247	sart3	93	62.247	Haplochromis_burtoni
ENSPEMG00000020811	-	94	88.181	ENSHGLG00000011579	SART3	90	87.370	Heterocephalus_glaber_female
ENSPEMG00000020811	-	94	85.284	ENSHGLG00100013263	SART3	89	84.473	Heterocephalus_glaber_male
ENSPEMG00000020811	-	94	56.879	ENSHCOG00000009693	sart3	92	56.978	Hippocampus_comes
ENSPEMG00000020811	-	94	62.528	ENSIPUG00000021151	sart3	93	62.528	Ictalurus_punctatus
ENSPEMG00000020811	-	94	86.111	ENSSTOG00000002376	SART3	89	85.764	Ictidomys_tridecemlineatus
ENSPEMG00000020811	-	94	89.005	ENSJJAG00000021869	Sart3	89	88.992	Jaculus_jaculus
ENSPEMG00000020811	-	94	63.371	ENSKMAG00000016864	sart3	93	63.217	Kryptolebias_marmoratus
ENSPEMG00000020811	-	94	61.469	ENSLBEG00000001263	sart3	93	61.268	Labrus_bergylta
ENSPEMG00000020811	-	72	54.269	ENSLACG00000007414	SART3	88	54.269	Latimeria_chalumnae
ENSPEMG00000020811	-	94	65.039	ENSLOCG00000004710	sart3	90	65.039	Lepisosteus_oculatus
ENSPEMG00000020811	-	94	87.659	ENSLAFG00000007167	SART3	89	87.428	Loxodonta_africana
ENSPEMG00000020811	-	94	86.312	ENSMFAG00000039887	SART3	90	86.086	Macaca_fascicularis
ENSPEMG00000020811	-	94	86.312	ENSMMUG00000017124	SART3	90	86.086	Macaca_mulatta
ENSPEMG00000020811	-	94	86.312	ENSMNEG00000011093	SART3	90	86.086	Macaca_nemestrina
ENSPEMG00000020811	-	94	86.425	ENSMLEG00000034251	SART3	90	85.973	Mandrillus_leucophaeus
ENSPEMG00000020811	-	94	62.177	ENSMAMG00000016195	sart3	93	62.444	Mastacembelus_armatus
ENSPEMG00000020811	-	94	62.262	ENSMZEG00005015248	sart3	93	62.275	Maylandia_zebra
ENSPEMG00000020811	-	94	74.458	ENSMGAG00000005746	SART3	99	74.458	Meleagris_gallopavo
ENSPEMG00000020811	-	94	94.077	ENSMAUG00000012434	Sart3	90	93.844	Mesocricetus_auratus
ENSPEMG00000020811	-	94	87.340	ENSMICG00000013052	SART3	89	86.760	Microcebus_murinus
ENSPEMG00000020811	-	94	93.728	ENSMOCG00000004078	Sart3	89	93.148	Microtus_ochrogaster
ENSPEMG00000020811	-	94	63.501	ENSMMOG00000017629	sart3	93	63.429	Mola_mola
ENSPEMG00000020811	-	94	76.136	ENSMODG00000002859	SART3	90	76.023	Monodelphis_domestica
ENSPEMG00000020811	-	93	62.162	ENSMALG00000014549	sart3	88	62.120	Monopterus_albus
ENSPEMG00000020811	-	94	92.334	MGP_CAROLIEiJ_G0027580	Sart3	89	92.334	Mus_caroli
ENSPEMG00000020811	-	94	92.102	ENSMUSG00000018974	Sart3	89	92.102	Mus_musculus
ENSPEMG00000020811	-	94	91.986	MGP_PahariEiJ_G0024162	Sart3	90	91.521	Mus_pahari
ENSPEMG00000020811	-	94	92.218	MGP_SPRETEiJ_G0028578	Sart3	89	92.218	Mus_spretus
ENSPEMG00000020811	-	94	87.370	ENSMPUG00000003402	SART3	81	86.906	Mustela_putorius_furo
ENSPEMG00000020811	-	94	86.421	ENSMLUG00000007906	SART3	89	86.076	Myotis_lucifugus
ENSPEMG00000020811	-	94	90.603	ENSNGAG00000014773	Sart3	89	89.907	Nannospalax_galili
ENSPEMG00000020811	-	94	62.486	ENSNBRG00000008526	sart3	94	62.500	Neolamprologus_brichardi
ENSPEMG00000020811	-	94	86.652	ENSNLEG00000006767	SART3	90	86.199	Nomascus_leucogenys
ENSPEMG00000020811	-	94	75.116	ENSMEUG00000006799	SART3	100	75.000	Notamacropus_eugenii
ENSPEMG00000020811	-	94	83.586	ENSOPRG00000015817	SART3	89	83.353	Ochotona_princeps
ENSPEMG00000020811	-	94	88.297	ENSODEG00000008547	SART3	90	87.486	Octodon_degus
ENSPEMG00000020811	-	94	63.004	ENSONIG00000013413	sart3	93	62.626	Oreochromis_niloticus
ENSPEMG00000020811	-	94	72.355	ENSOANG00000008794	SART3	99	72.014	Ornithorhynchus_anatinus
ENSPEMG00000020811	-	94	87.384	ENSOCUG00000016285	SART3	89	87.153	Oryctolagus_cuniculus
ENSPEMG00000020811	-	94	63.360	ENSORLG00000006895	sart3	93	63.514	Oryzias_latipes
ENSPEMG00000020811	-	94	63.575	ENSORLG00020015473	sart3	93	63.729	Oryzias_latipes_hni
ENSPEMG00000020811	-	94	63.235	ENSORLG00015003914	sart3	93	63.390	Oryzias_latipes_hsok
ENSPEMG00000020811	-	94	63.698	ENSOMEG00000002174	sart3	93	63.923	Oryzias_melastigma
ENSPEMG00000020811	-	94	87.875	ENSOGAG00000000932	SART3	89	87.182	Otolemur_garnettii
ENSPEMG00000020811	-	94	84.223	ENSOARG00000018082	SART3	89	83.759	Ovis_aries
ENSPEMG00000020811	-	94	85.973	ENSPPAG00000041812	SART3	90	85.520	Pan_paniscus
ENSPEMG00000020811	-	94	87.370	ENSPPRG00000001579	SART3	89	86.906	Panthera_pardus
ENSPEMG00000020811	-	94	87.486	ENSPTIG00000021928	SART3	89	87.022	Panthera_tigris_altaica
ENSPEMG00000020811	-	94	85.860	ENSPTRG00000005404	SART3	90	85.407	Pan_troglodytes
ENSPEMG00000020811	-	94	86.312	ENSPANG00000024915	SART3	90	85.973	Papio_anubis
ENSPEMG00000020811	-	94	62.558	ENSPKIG00000025203	sart3	93	62.558	Paramormyrops_kingsleyae
ENSPEMG00000020811	-	94	73.550	ENSPSIG00000002594	SART3	100	73.035	Pelodiscus_sinensis
ENSPEMG00000020811	-	94	60.771	ENSPMGG00000018729	sart3	93	60.362	Periophthalmus_magnuspinnatus
ENSPEMG00000020811	-	94	75.703	ENSPCIG00000023889	SART3	90	75.591	Phascolarctos_cinereus
ENSPEMG00000020811	-	94	61.616	ENSPFOG00000010290	sart3	93	61.167	Poecilia_formosa
ENSPEMG00000020811	-	94	61.616	ENSPLAG00000002711	sart3	93	61.167	Poecilia_latipinna
ENSPEMG00000020811	-	94	60.987	ENSPMEG00000000456	sart3	94	60.987	Poecilia_mexicana
ENSPEMG00000020811	-	94	61.486	ENSPREG00000022086	sart3	94	61.384	Poecilia_reticulata
ENSPEMG00000020811	-	94	87.644	ENSPPYG00000004919	SART3	90	87.182	Pongo_abelii
ENSPEMG00000020811	-	89	81.127	ENSPCAG00000007505	SART3	84	81.005	Procavia_capensis
ENSPEMG00000020811	-	94	77.726	ENSPCOG00000014016	SART3	89	77.726	Propithecus_coquereli
ENSPEMG00000020811	-	94	83.662	ENSPVAG00000007442	SART3	89	83.198	Pteropus_vampyrus
ENSPEMG00000020811	-	94	62.304	ENSPNYG00000015653	sart3	93	62.247	Pundamilia_nyererei
ENSPEMG00000020811	-	94	62.304	ENSPNAG00000001851	sart3	93	62.304	Pygocentrus_nattereri
ENSPEMG00000020811	-	94	91.986	ENSRNOG00000000702	Sart3	90	91.754	Rattus_norvegicus
ENSPEMG00000020811	-	94	88.106	ENSRBIG00000034143	SART3	90	87.644	Rhinopithecus_bieti
ENSPEMG00000020811	-	94	88.337	ENSRROG00000003629	SART3	90	87.760	Rhinopithecus_roxellana
ENSPEMG00000020811	-	94	84.820	ENSSBOG00000033093	SART3	89	84.357	Saimiri_boliviensis_boliviensis
ENSPEMG00000020811	-	94	76.651	ENSSHAG00000010864	SART3	99	76.424	Sarcophilus_harrisii
ENSPEMG00000020811	-	94	64.746	ENSSFOG00015004012	sart3	90	64.520	Scleropages_formosus
ENSPEMG00000020811	-	94	61.400	ENSSMAG00000014666	sart3	93	61.243	Scophthalmus_maximus
ENSPEMG00000020811	-	94	62.556	ENSSDUG00000011664	sart3	93	60.962	Seriola_dumerili
ENSPEMG00000020811	-	94	62.262	ENSSLDG00000024990	sart3	87	62.640	Seriola_lalandi_dorsalis
ENSPEMG00000020811	-	77	88.454	ENSSARG00000005401	SART3	72	88.952	Sorex_araneus
ENSPEMG00000020811	-	91	73.913	ENSSPUG00000009541	SART3	92	73.796	Sphenodon_punctatus
ENSPEMG00000020811	-	94	63.063	ENSSPAG00000010658	sart3	93	62.909	Stegastes_partitus
ENSPEMG00000020811	-	94	85.615	ENSSSCG00000009946	SART3	90	83.636	Sus_scrofa
ENSPEMG00000020811	-	94	73.923	ENSTGUG00000006905	SART3	98	73.923	Taeniopygia_guttata
ENSPEMG00000020811	-	94	60.884	ENSTRUG00000014173	sart3	93	60.771	Takifugu_rubripes
ENSPEMG00000020811	-	94	61.236	ENSTNIG00000015867	sart3	99	61.236	Tetraodon_nigroviridis
ENSPEMG00000020811	-	89	84.275	ENSTBEG00000008888	SART3	88	84.152	Tupaia_belangeri
ENSPEMG00000020811	-	94	84.971	ENSTTRG00000003993	SART3	89	84.509	Tursiops_truncatus
ENSPEMG00000020811	-	94	87.138	ENSUAMG00000023906	SART3	89	86.674	Ursus_americanus
ENSPEMG00000020811	-	94	87.254	ENSUMAG00000005844	SART3	97	86.790	Ursus_maritimus
ENSPEMG00000020811	-	50	87.097	ENSVPAG00000009997	-	52	87.097	Vicugna_pacos
ENSPEMG00000020811	-	94	87.833	ENSVVUG00000008216	SART3	89	87.370	Vulpes_vulpes
ENSPEMG00000020811	-	94	64.865	ENSXETG00000017645	sart3	96	64.752	Xenopus_tropicalis
ENSPEMG00000020811	-	94	62.557	ENSXCOG00000017212	sart3	93	62.144	Xiphophorus_couchianus
ENSPEMG00000020811	-	94	61.323	ENSXMAG00000018160	sart3	94	61.279	Xiphophorus_maculatus