EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000020899 (Gene tree)
Gene ID: 102927581
Gene Symbol: -
Alias: -
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 34330 bases
Position: chrKI615342.1:2867069-2901398
Accession: 102927581
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000024043	GUCT	PF08152.12	2.1e-27	1	1
ENSPEMP00000024043	ResIII	PF04851.15	5.9e-10	1	1
ENSPEMP00000024043	DEAD	PF00270.29	8.2e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000028420	-	2547	XM_006972729	ENSPEMP00000024043	735 (aa)	XP_006972791	UPI00042AA043

Gene Model

Click here to download ENSPEMG00000020899's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000020899's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000020899	-	99	56.234	ENSPEMG00000018513	Ddx21	75	64.706
ENSPEMG00000020899	-	50	34.232	ENSPEMG00000021115	Ddx17	55	34.232
ENSPEMG00000020899	-	50	32.800	ENSPEMG00000009100	Eif4a1	88	32.800
ENSPEMG00000020899	-	55	33.570	ENSPEMG00000023215	Ddx27	52	33.413
ENSPEMG00000020899	-	52	32.178	ENSPEMG00000015978	-	63	31.336
ENSPEMG00000020899	-	91	86.458	ENSPEMG00000012539	-	99	86.458
ENSPEMG00000020899	-	51	33.842	ENSPEMG00000010438	-	57	33.842
ENSPEMG00000020899	-	50	32.353	ENSPEMG00000009441	-	86	32.353
ENSPEMG00000020899	-	50	32.258	ENSPEMG00000021495	-	90	31.487

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000020899	-	92	94.985	ENSG00000107625	DDX50	92	94.985	Homo_sapiens
ENSPEMG00000020899	-	93	93.558	ENSAMEG00000017992	DDX50	92	93.667	Ailuropoda_melanoleuca
ENSPEMG00000020899	-	92	75.543	ENSANAG00000017785	-	91	75.652	Aotus_nancymaae
ENSPEMG00000020899	-	100	93.351	ENSBTAG00000033413	DDX50	92	94.838	Bos_taurus
ENSPEMG00000020899	-	92	94.985	ENSCJAG00000018844	DDX50	92	94.985	Callithrix_jacchus
ENSPEMG00000020899	-	93	93.997	ENSCAFG00000013776	DDX50	99	94.109	Canis_familiaris
ENSPEMG00000020899	-	93	93.997	ENSCAFG00020025977	DDX50	92	94.109	Canis_lupus_dingo
ENSPEMG00000020899	-	100	92.402	ENSCHIG00000000285	DDX50	92	94.248	Capra_hircus
ENSPEMG00000020899	-	92	94.248	ENSTSYG00000004192	DDX50	92	94.248	Carlito_syrichta
ENSPEMG00000020899	-	88	77.054	ENSCAPG00000007230	-	87	77.042	Cavia_aperea
ENSPEMG00000020899	-	92	94.205	ENSCPOG00000002131	-	92	94.239	Cavia_porcellus
ENSPEMG00000020899	-	82	89.247	ENSCCAG00000030543	DDX50	90	85.265	Cebus_capucinus
ENSPEMG00000020899	-	91	65.249	ENSCATG00000039259	-	89	65.492	Cercocebus_atys
ENSPEMG00000020899	-	98	69.764	ENSCATG00000035153	-	89	87.147	Cercocebus_atys
ENSPEMG00000020899	-	92	91.876	ENSCATG00000032463	DDX50	92	91.728	Cercocebus_atys
ENSPEMG00000020899	-	97	66.667	ENSCLAG00000001938	-	91	69.325	Chinchilla_lanigera
ENSPEMG00000020899	-	50	83.469	ENSCLAG00000001553	-	79	86.129	Chinchilla_lanigera
ENSPEMG00000020899	-	92	94.535	ENSCLAG00000012957	-	92	94.535	Chinchilla_lanigera
ENSPEMG00000020899	-	92	94.985	ENSCSAG00000007703	DDX50	92	94.985	Chlorocebus_sabaeus
ENSPEMG00000020899	-	88	92.142	ENSCHOG00000000233	DDX50	97	92.142	Choloepus_hoffmanni
ENSPEMG00000020899	-	96	65.966	ENSCANG00000028077	-	91	65.447	Colobus_angolensis_palliatus
ENSPEMG00000020899	-	92	80.383	ENSCANG00000036450	-	92	80.383	Colobus_angolensis_palliatus
ENSPEMG00000020899	-	86	67.930	ENSCANG00000018820	-	88	70.435	Colobus_angolensis_palliatus
ENSPEMG00000020899	-	100	97.011	ENSCGRG00001020223	Ddx50	100	97.011	Cricetulus_griseus_chok1gshd
ENSPEMG00000020899	-	100	96.739	ENSCGRG00000015884	Ddx50	100	96.739	Cricetulus_griseus_crigri
ENSPEMG00000020899	-	88	87.963	ENSDNOG00000001675	DDX50	100	87.963	Dasypus_novemcinctus
ENSPEMG00000020899	-	92	95.428	ENSDORG00000007310	Ddx50	92	95.428	Dipodomys_ordii
ENSPEMG00000020899	-	82	95.929	ENSETEG00000014069	DDX50	83	95.929	Echinops_telfairi
ENSPEMG00000020899	-	93	93.988	ENSEASG00005015595	DDX50	92	94.100	Equus_asinus_asinus
ENSPEMG00000020899	-	93	93.988	ENSECAG00000023044	DDX50	92	94.100	Equus_caballus
ENSPEMG00000020899	-	89	92.320	ENSEEUG00000005782	DDX50	77	95.767	Erinaceus_europaeus
ENSPEMG00000020899	-	92	94.698	ENSFCAG00000012678	DDX50	92	94.698	Felis_catus
ENSPEMG00000020899	-	92	88.348	ENSFDAG00000016109	-	91	88.348	Fukomys_damarensis
ENSPEMG00000020899	-	92	94.985	ENSGGOG00000010100	DDX50	92	94.985	Gorilla_gorilla
ENSPEMG00000020899	-	51	79.045	ENSGGOG00000041063	-	82	82.132	Gorilla_gorilla
ENSPEMG00000020899	-	52	69.713	ENSGGOG00000022568	-	100	70.496	Gorilla_gorilla
ENSPEMG00000020899	-	92	93.363	ENSHGLG00000013466	DDX50	92	93.363	Heterocephalus_glaber_female
ENSPEMG00000020899	-	82	84.043	ENSHGLG00100006568	-	92	84.043	Heterocephalus_glaber_male
ENSPEMG00000020899	-	92	93.363	ENSHGLG00100017191	DDX50	92	93.363	Heterocephalus_glaber_male
ENSPEMG00000020899	-	100	91.599	ENSSTOG00000021852	-	92	92.489	Ictidomys_tridecemlineatus
ENSPEMG00000020899	-	100	70.445	ENSJJAG00000019626	-	91	72.180	Jaculus_jaculus
ENSPEMG00000020899	-	100	91.180	ENSJJAG00000023928	-	92	92.773	Jaculus_jaculus
ENSPEMG00000020899	-	92	94.838	ENSLAFG00000006186	DDX50	92	94.838	Loxodonta_africana
ENSPEMG00000020899	-	92	94.985	ENSMFAG00000044067	DDX50	92	94.985	Macaca_fascicularis
ENSPEMG00000020899	-	98	69.722	ENSMFAG00000045339	-	89	86.520	Macaca_fascicularis
ENSPEMG00000020899	-	92	94.985	ENSMMUG00000001006	DDX50	92	94.985	Macaca_mulatta
ENSPEMG00000020899	-	80	66.044	ENSMMUG00000045343	-	80	65.763	Macaca_mulatta
ENSPEMG00000020899	-	92	88.053	ENSMNEG00000031664	DDX50	92	88.053	Macaca_nemestrina
ENSPEMG00000020899	-	98	70.166	ENSMNEG00000045530	-	89	87.461	Macaca_nemestrina
ENSPEMG00000020899	-	92	93.215	ENSMLEG00000037313	DDX50	92	93.363	Mandrillus_leucophaeus
ENSPEMG00000020899	-	86	81.733	ENSMLEG00000041988	-	89	85.013	Mandrillus_leucophaeus
ENSPEMG00000020899	-	56	96.359	ENSMAUG00000022192	Ddx50	100	96.359	Mesocricetus_auratus
ENSPEMG00000020899	-	92	86.431	ENSMICG00000017539	DDX50	91	86.283	Microcebus_murinus
ENSPEMG00000020899	-	100	96.341	ENSMOCG00000001676	Ddx50	100	96.341	Microtus_ochrogaster
ENSPEMG00000020899	-	92	78.686	ENSMODG00000010741	DDX50	92	79.446	Monodelphis_domestica
ENSPEMG00000020899	-	92	94.978	MGP_CAROLIEiJ_G0015389	Ddx50	92	94.978	Mus_caroli
ENSPEMG00000020899	-	92	95.126	ENSMUSG00000020076	Ddx50	92	95.569	Mus_musculus
ENSPEMG00000020899	-	92	95.716	MGP_PahariEiJ_G0030805	Ddx50	92	95.716	Mus_pahari
ENSPEMG00000020899	-	92	95.126	MGP_SPRETEiJ_G0016200	Ddx50	92	95.569	Mus_spretus
ENSPEMG00000020899	-	88	93.663	ENSMPUG00000004589	DDX50	99	93.663	Mustela_putorius_furo
ENSPEMG00000020899	-	92	92.478	ENSMLUG00000017590	DDX50	92	92.478	Myotis_lucifugus
ENSPEMG00000020899	-	92	95.569	ENSNGAG00000004283	Ddx50	92	95.569	Nannospalax_galili
ENSPEMG00000020899	-	92	94.985	ENSNLEG00000011631	DDX50	92	94.985	Nomascus_leucogenys
ENSPEMG00000020899	-	89	65.449	ENSNLEG00000035506	-	88	76.324	Nomascus_leucogenys
ENSPEMG00000020899	-	92	92.024	ENSOPRG00000001619	DDX50	92	92.024	Ochotona_princeps
ENSPEMG00000020899	-	92	93.796	ENSODEG00000014597	-	92	93.796	Octodon_degus
ENSPEMG00000020899	-	93	65.527	ENSOANG00000004776	DDX50	75	70.658	Ornithorhynchus_anatinus
ENSPEMG00000020899	-	95	91.130	ENSOCUG00000002879	DDX50	95	93.058	Oryctolagus_cuniculus
ENSPEMG00000020899	-	92	94.100	ENSOGAG00000001844	DDX50	92	94.100	Otolemur_garnettii
ENSPEMG00000020899	-	100	92.402	ENSOARG00000005264	DDX50	92	94.248	Ovis_aries
ENSPEMG00000020899	-	52	69.657	ENSPPAG00000026788	-	99	70.449	Pan_paniscus
ENSPEMG00000020899	-	92	94.838	ENSPPAG00000040723	DDX50	92	94.838	Pan_paniscus
ENSPEMG00000020899	-	92	94.698	ENSPPRG00000015826	DDX50	92	94.698	Panthera_pardus
ENSPEMG00000020899	-	92	94.698	ENSPTIG00000008454	DDX50	92	94.698	Panthera_tigris_altaica
ENSPEMG00000020899	-	52	69.657	ENSPTRG00000044913	-	99	70.449	Pan_troglodytes
ENSPEMG00000020899	-	92	94.838	ENSPTRG00000002562	DDX50	92	94.838	Pan_troglodytes
ENSPEMG00000020899	-	92	87.168	ENSPANG00000022143	-	92	87.168	Papio_anubis
ENSPEMG00000020899	-	92	78.645	ENSPCIG00000016036	DDX50	94	78.917	Phascolarctos_cinereus
ENSPEMG00000020899	-	83	95.269	ENSPPYG00000002390	DDX50	91	95.402	Pongo_abelii
ENSPEMG00000020899	-	84	79.837	ENSPCAG00000009692	DDX50	100	79.837	Procavia_capensis
ENSPEMG00000020899	-	79	82.592	ENSPCOG00000012574	DDX50	90	82.592	Propithecus_coquereli
ENSPEMG00000020899	-	86	91.460	ENSPVAG00000009519	DDX50	78	91.460	Pteropus_vampyrus
ENSPEMG00000020899	-	92	94.830	ENSRNOG00000000396	Ddx50	98	97.059	Rattus_norvegicus
ENSPEMG00000020899	-	99	63.934	ENSRBIG00000036573	-	90	65.611	Rhinopithecus_bieti
ENSPEMG00000020899	-	99	63.821	ENSRBIG00000039673	-	90	63.436	Rhinopithecus_bieti
ENSPEMG00000020899	-	87	93.302	ENSRBIG00000042841	-	97	95.312	Rhinopithecus_bieti
ENSPEMG00000020899	-	92	94.838	ENSRROG00000032158	DDX50	92	94.838	Rhinopithecus_roxellana
ENSPEMG00000020899	-	52	68.325	ENSRROG00000031940	-	87	72.615	Rhinopithecus_roxellana
ENSPEMG00000020899	-	99	62.364	ENSRROG00000022853	-	90	62.556	Rhinopithecus_roxellana
ENSPEMG00000020899	-	92	83.481	ENSSBOG00000014441	DDX50	99	84.762	Saimiri_boliviensis_boliviensis
ENSPEMG00000020899	-	74	71.324	ENSSHAG00000005334	-	78	67.003	Sarcophilus_harrisii
ENSPEMG00000020899	-	88	79.756	ENSSHAG00000005690	DDX50	91	80.152	Sarcophilus_harrisii
ENSPEMG00000020899	-	88	85.426	ENSSARG00000013553	DDX50	88	85.426	Sorex_araneus
ENSPEMG00000020899	-	100	91.995	ENSSSCG00000010246	DDX50	92	93.658	Sus_scrofa
ENSPEMG00000020899	-	92	71.787	ENSTBEG00000001085	DDX50	92	71.787	Tupaia_belangeri
ENSPEMG00000020899	-	92	86.726	ENSTTRG00000012408	DDX50	92	86.726	Tursiops_truncatus
ENSPEMG00000020899	-	93	93.997	ENSUAMG00000010976	DDX50	99	96.246	Ursus_americanus
ENSPEMG00000020899	-	93	93.997	ENSUMAG00000007726	DDX50	92	94.109	Ursus_maritimus
ENSPEMG00000020899	-	92	93.658	ENSVPAG00000000626	DDX50	92	93.658	Vicugna_pacos
ENSPEMG00000020899	-	82	88.723	ENSVVUG00000020366	DDX50	97	90.956	Vulpes_vulpes