EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000020934 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 15484 bases
Position: chrKI615449.1:506457-521940
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000024092	zf-C2H2	PF00096.26	9.2e-57	1	10
ENSPEMP00000024092	zf-C2H2	PF00096.26	9.2e-57	2	10
ENSPEMP00000024092	zf-C2H2	PF00096.26	9.2e-57	3	10
ENSPEMP00000024092	zf-C2H2	PF00096.26	9.2e-57	4	10
ENSPEMP00000024092	zf-C2H2	PF00096.26	9.2e-57	5	10
ENSPEMP00000024092	zf-C2H2	PF00096.26	9.2e-57	6	10
ENSPEMP00000024092	zf-C2H2	PF00096.26	9.2e-57	7	10
ENSPEMP00000024092	zf-C2H2	PF00096.26	9.2e-57	8	10
ENSPEMP00000024092	zf-C2H2	PF00096.26	9.2e-57	9	10
ENSPEMP00000024092	zf-C2H2	PF00096.26	9.2e-57	10	10
ENSPEMP00000024092	zf-met	PF12874.7	3.8e-12	1	2
ENSPEMP00000024092	zf-met	PF12874.7	3.8e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000028472	-	1329	-	ENSPEMP00000024092	443 (aa)	-	-
ENSPEMT00000028471	-	228	-	ENSPEMP00000024091	76 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000020934's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000020934's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000020934	-	99	46.000	ENSPEMG00000009428	Zfp39	92	46.000
ENSPEMG00000020934	-	82	41.758	ENSPEMG00000011739	Snai2	51	41.758
ENSPEMG00000020934	-	93	47.403	ENSPEMG00000007461	-	95	47.403
ENSPEMG00000020934	-	91	48.768	ENSPEMG00000010242	-	68	47.581
ENSPEMG00000020934	-	100	49.196	ENSPEMG00000008817	-	98	49.196
ENSPEMG00000020934	-	80	44.828	ENSPEMG00000015523	Zfp423	95	37.719
ENSPEMG00000020934	-	79	44.086	ENSPEMG00000005321	Patz1	56	34.061
ENSPEMG00000020934	-	100	45.225	ENSPEMG00000007241	-	98	45.179
ENSPEMG00000020934	-	84	43.602	ENSPEMG00000014980	Zfp64	68	35.040
ENSPEMG00000020934	-	99	46.957	ENSPEMG00000016507	Zfp26	89	46.957
ENSPEMG00000020934	-	99	47.581	ENSPEMG00000022834	Zfp709	99	47.581
ENSPEMG00000020934	-	99	47.692	ENSPEMG00000000403	-	92	48.397
ENSPEMG00000020934	-	84	49.275	ENSPEMG00000023566	Zfp768	53	49.270
ENSPEMG00000020934	-	100	48.659	ENSPEMG00000017339	2610008E11Rik	95	48.659
ENSPEMG00000020934	-	86	42.453	ENSPEMG00000016061	Zfp574	93	41.026
ENSPEMG00000020934	-	92	52.000	ENSPEMG00000014415	Zfp1	99	52.000
ENSPEMG00000020934	-	100	48.433	ENSPEMG00000000548	-	98	48.433
ENSPEMG00000020934	-	84	44.444	ENSPEMG00000007237	Zfp865	79	38.547
ENSPEMG00000020934	-	100	46.552	ENSPEMG00000021570	Zkscan3	58	45.525
ENSPEMG00000020934	-	85	42.453	ENSPEMG00000023213	Snai1	62	42.453
ENSPEMG00000020934	-	100	47.368	ENSPEMG00000011776	-	98	47.368
ENSPEMG00000020934	-	89	42.997	ENSPEMG00000021923	Zbtb17	55	41.228
ENSPEMG00000020934	-	99	53.125	ENSPEMG00000000472	Zfp28	63	53.125
ENSPEMG00000020934	-	77	33.540	ENSPEMG00000008318	-	92	35.220
ENSPEMG00000020934	-	100	44.675	ENSPEMG00000014281	-	100	59.259
ENSPEMG00000020934	-	84	43.684	ENSPEMG00000009113	Zfp628	62	41.204
ENSPEMG00000020934	-	79	40.816	ENSPEMG00000001292	Wt1	50	39.604
ENSPEMG00000020934	-	99	48.634	ENSPEMG00000007595	-	88	48.634
ENSPEMG00000020934	-	100	50.000	ENSPEMG00000008173	-	98	50.000
ENSPEMG00000020934	-	85	35.731	ENSPEMG00000020736	Zfp672	91	37.237
ENSPEMG00000020934	-	84	37.050	ENSPEMG00000016757	Zfp408	51	37.050
ENSPEMG00000020934	-	100	47.006	ENSPEMG00000021937	-	97	47.006
ENSPEMG00000020934	-	100	63.474	ENSPEMG00000020749	-	100	63.474
ENSPEMG00000020934	-	86	50.404	ENSPEMG00000018022	-	72	50.404
ENSPEMG00000020934	-	91	35.088	ENSPEMG00000000870	Repin1	82	35.410
ENSPEMG00000020934	-	99	33.333	ENSPEMG00000018947	Zfp784	91	33.010
ENSPEMG00000020934	-	83	35.714	ENSPEMG00000023302	-	50	38.667
ENSPEMG00000020934	-	86	41.463	ENSPEMG00000015555	BC025920	97	41.463
ENSPEMG00000020934	-	100	43.041	ENSPEMG00000023883	-	98	43.132
ENSPEMG00000020934	-	100	56.433	ENSPEMG00000021548	Zfp712	99	56.433
ENSPEMG00000020934	-	100	49.854	ENSPEMG00000023329	-	96	49.854
ENSPEMG00000020934	-	99	52.861	ENSPEMG00000022945	-	82	52.861
ENSPEMG00000020934	-	99	49.819	ENSPEMG00000024167	Zfp354a	98	46.522
ENSPEMG00000020934	-	100	40.773	ENSPEMG00000000860	Zfp94	95	40.773
ENSPEMG00000020934	-	99	35.526	ENSPEMG00000016975	Zfp940	99	41.076
ENSPEMG00000020934	-	100	50.207	ENSPEMG00000023985	Zfp61	64	54.255
ENSPEMG00000020934	-	84	39.031	ENSPEMG00000016745	Zfp319	96	38.592
ENSPEMG00000020934	-	86	45.669	ENSPEMG00000022216	-	100	45.669

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000020934	-	82	33.040	ENSAPOG00000001097	-	64	33.040	Acanthochromis_polyacanthus
ENSPEMG00000020934	-	87	32.919	ENSATEG00000014755	-	78	32.919	Anabas_testudineus
ENSPEMG00000020934	-	98	51.622	ENSCSAG00000001938	ZNF845	89	51.622	Chlorocebus_sabaeus
ENSPEMG00000020934	-	88	42.254	ENSCSAVG00000007589	-	100	42.254	Ciona_savignyi
ENSPEMG00000020934	-	96	46.040	ENSCSAVG00000001989	-	99	46.040	Ciona_savignyi
ENSPEMG00000020934	-	86	51.351	ENSCANG00000038794	ZNF845	88	51.351	Colobus_angolensis_palliatus
ENSPEMG00000020934	-	100	69.731	ENSCGRG00001024630	-	96	69.731	Cricetulus_griseus_chok1gshd
ENSPEMG00000020934	-	88	45.257	ENSEBUG00000012628	ZNF845	97	44.838	Eptatretus_burgeri
ENSPEMG00000020934	-	87	47.293	ENSEBUG00000008988	ZNF845	85	47.253	Eptatretus_burgeri
ENSPEMG00000020934	-	86	45.879	ENSEBUG00000007308	ZNF845	95	45.879	Eptatretus_burgeri
ENSPEMG00000020934	-	87	46.781	ENSEBUG00000008852	ZNF845	73	47.425	Eptatretus_burgeri
ENSPEMG00000020934	-	84	31.420	ENSHBUG00000009720	-	61	31.217	Haplochromis_burtoni
ENSPEMG00000020934	-	86	50.811	ENSMLEG00000044333	ZNF845	99	50.811	Mandrillus_leucophaeus
ENSPEMG00000020934	-	84	31.398	ENSMAMG00000018536	-	63	32.800	Mastacembelus_armatus
ENSPEMG00000020934	-	85	35.294	ENSMZEG00005020085	-	94	35.294	Maylandia_zebra
ENSPEMG00000020934	-	100	53.421	ENSMAUG00000014247	-	100	51.961	Mesocricetus_auratus
ENSPEMG00000020934	-	100	57.562	ENSMOCG00000002167	Zfp712	99	57.562	Microtus_ochrogaster
ENSPEMG00000020934	-	84	30.709	ENSMALG00000013321	-	68	31.975	Monopterus_albus
ENSPEMG00000020934	-	100	51.068	MGP_CAROLIEiJ_G0018661	Zfp759	99	51.068	Mus_caroli
ENSPEMG00000020934	-	100	51.496	ENSMUSG00000057396	Zfp759	99	51.496	Mus_musculus
ENSPEMG00000020934	-	100	54.424	ENSMUSG00000095432	Zfp748	99	54.692	Mus_musculus
ENSPEMG00000020934	-	100	54.155	MGP_PahariEiJ_G0015756	Zfp748	99	54.960	Mus_pahari
ENSPEMG00000020934	-	100	51.693	MGP_PahariEiJ_G0015741	Zfp759	99	50.743	Mus_pahari
ENSPEMG00000020934	-	100	54.424	MGP_SPRETEiJ_G0019560	Zfp748	99	54.692	Mus_spretus
ENSPEMG00000020934	-	100	51.496	MGP_SPRETEiJ_G0019544	Zfp759	99	51.496	Mus_spretus
ENSPEMG00000020934	-	96	51.622	ENSNLEG00000006172	ZNF845	99	51.622	Nomascus_leucogenys
ENSPEMG00000020934	-	87	31.556	ENSORLG00000028851	-	69	31.556	Oryzias_latipes
ENSPEMG00000020934	-	83	31.806	ENSOMEG00000010300	-	87	31.806	Oryzias_melastigma
ENSPEMG00000020934	-	100	52.989	ENSOGAG00000029343	-	99	52.989	Otolemur_garnettii
ENSPEMG00000020934	-	86	51.622	ENSPTRG00000050668	ZNF845	99	51.622	Pan_troglodytes
ENSPEMG00000020934	-	84	33.893	ENSPFOG00000010474	-	99	33.893	Poecilia_formosa
ENSPEMG00000020934	-	84	33.898	ENSPLAG00000017843	-	89	33.898	Poecilia_latipinna
ENSPEMG00000020934	-	84	32.011	ENSPMEG00000017809	-	67	31.048	Poecilia_mexicana
ENSPEMG00000020934	-	84	31.420	ENSPNYG00000021795	-	61	31.217	Pundamilia_nyererei
ENSPEMG00000020934	-	100	54.853	ENSRNOG00000049259	LOC102549842	99	54.853	Rattus_norvegicus
ENSPEMG00000020934	-	99	49.598	ENSRBIG00000035402	-	97	49.227	Rhinopithecus_bieti
ENSPEMG00000020934	-	99	49.598	ENSSBOG00000028573	-	98	49.598	Saimiri_boliviensis_boliviensis
ENSPEMG00000020934	-	82	32.368	ENSSDUG00000010305	-	59	32.368	Seriola_dumerili
ENSPEMG00000020934	-	84	31.579	ENSSPAG00000010470	-	61	31.579	Stegastes_partitus