EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000020979 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 1285 bases
Position: chrKI615589.1:2291954-2293238
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000024152	LSM	PF01423.22	1.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000028534	-	1131	-	ENSPEMP00000024152	240 (aa)	-	UPI00042ACD9E

Gene Model

Click here to download ENSPEMG00000020979's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000020979's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000020979	-	82	90.816	ENSPEMG00000007948	Snrpb	93	88.785
ENSPEMG00000020979	-	89	84.038	ENSPEMG00000013920	-	88	82.710
ENSPEMG00000020979	-	89	95.775	ENSPEMG00000012911	-	89	95.794

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000020979	-	89	95.775	ENSG00000128739	SNRPN	100	97.041	Homo_sapiens
ENSPEMG00000020979	-	95	95.154	ENSAMEG00000007034	SNRPN	93	95.154	Ailuropoda_melanoleuca
ENSPEMG00000020979	-	89	95.775	ENSANAG00000034241	SNRPN	89	95.794	Aotus_nancymaae
ENSPEMG00000020979	-	95	94.298	ENSBTAG00000008251	SNRPN	95	94.298	Bos_taurus
ENSPEMG00000020979	-	89	95.775	ENSCJAG00000003759	-	89	95.794	Callithrix_jacchus
ENSPEMG00000020979	-	89	95.305	ENSCJAG00000042622	-	90	95.327	Callithrix_jacchus
ENSPEMG00000020979	-	95	95.175	ENSCAFG00000010127	SNRPN	95	95.175	Canis_familiaris
ENSPEMG00000020979	-	95	95.175	ENSCAFG00020024075	SNRPN	95	95.175	Canis_lupus_dingo
ENSPEMG00000020979	-	95	94.298	ENSCHIG00000017477	SNRPN	95	94.298	Capra_hircus
ENSPEMG00000020979	-	89	95.775	ENSTSYG00000005248	SNRPN	89	95.794	Carlito_syrichta
ENSPEMG00000020979	-	89	95.775	ENSCAPG00000003047	SNRPN	89	95.794	Cavia_aperea
ENSPEMG00000020979	-	89	95.775	ENSCPOG00000020270	SNRPN	89	95.794	Cavia_porcellus
ENSPEMG00000020979	-	89	95.775	ENSCCAG00000024231	SNRPN	89	95.794	Cebus_capucinus
ENSPEMG00000020979	-	89	95.775	ENSCATG00000032518	SNRPN	89	95.794	Cercocebus_atys
ENSPEMG00000020979	-	89	95.775	ENSCLAG00000011376	SNRPN	89	95.794	Chinchilla_lanigera
ENSPEMG00000020979	-	89	95.775	ENSCSAG00000006406	SNRPN	89	95.794	Chlorocebus_sabaeus
ENSPEMG00000020979	-	86	94.686	ENSCHOG00000001846	SNRPN	78	94.712	Choloepus_hoffmanni
ENSPEMG00000020979	-	89	95.775	ENSCANG00000041156	SNRPN	89	95.794	Colobus_angolensis_palliatus
ENSPEMG00000020979	-	89	95.305	ENSCGRG00001004136	Snrpn	89	95.327	Cricetulus_griseus_chok1gshd
ENSPEMG00000020979	-	89	95.305	ENSCGRG00000001621	Snrpn	89	95.327	Cricetulus_griseus_crigri
ENSPEMG00000020979	-	72	90.173	ENSCVAG00000014193	SNRPN	69	90.476	Cyprinodon_variegatus
ENSPEMG00000020979	-	76	96.703	ENSDNOG00000037060	SNRPN	87	94.836	Dasypus_novemcinctus
ENSPEMG00000020979	-	89	95.305	ENSDORG00000004527	Snrpn	89	95.327	Dipodomys_ordii
ENSPEMG00000020979	-	95	95.175	ENSEASG00005017871	SNRPN	95	95.175	Equus_asinus_asinus
ENSPEMG00000020979	-	95	95.175	ENSECAG00000018148	SNRPN	95	95.175	Equus_caballus
ENSPEMG00000020979	-	95	94.273	ENSEEUG00000007440	-	95	94.273	Erinaceus_europaeus
ENSPEMG00000020979	-	95	95.175	ENSFCAG00000022298	-	95	95.175	Felis_catus
ENSPEMG00000020979	-	89	95.305	ENSFDAG00000016578	-	89	95.327	Fukomys_damarensis
ENSPEMG00000020979	-	76	81.967	ENSFDAG00000010528	-	68	87.770	Fukomys_damarensis
ENSPEMG00000020979	-	74	75.141	ENSGMOG00000018161	SNRPN	74	74.405	Gadus_morhua
ENSPEMG00000020979	-	89	95.775	ENSGGOG00000003988	SNRPN	89	95.794	Gorilla_gorilla
ENSPEMG00000020979	-	58	79.137	ENSGGOG00000024469	-	69	80.292	Gorilla_gorilla
ENSPEMG00000020979	-	89	86.854	ENSHGLG00000019812	-	89	87.383	Heterocephalus_glaber_female
ENSPEMG00000020979	-	89	95.775	ENSHGLG00000011924	SNRPN	89	95.794	Heterocephalus_glaber_female
ENSPEMG00000020979	-	73	80.460	ENSHGLG00000020936	-	88	76.526	Heterocephalus_glaber_female
ENSPEMG00000020979	-	100	81.250	ENSHGLG00000002327	-	88	80.751	Heterocephalus_glaber_female
ENSPEMG00000020979	-	100	78.750	ENSHGLG00100004881	-	88	78.873	Heterocephalus_glaber_male
ENSPEMG00000020979	-	89	95.775	ENSHGLG00100016559	SNRPN	89	95.794	Heterocephalus_glaber_male
ENSPEMG00000020979	-	89	86.854	ENSHGLG00100021056	-	89	87.383	Heterocephalus_glaber_male
ENSPEMG00000020979	-	89	95.775	ENSSTOG00000001339	SNRPN	89	95.794	Ictidomys_tridecemlineatus
ENSPEMG00000020979	-	88	95.283	ENSLAFG00000009458	SNRPN	89	95.305	Loxodonta_africana
ENSPEMG00000020979	-	89	95.775	ENSMFAG00000042235	SNRPN	89	95.794	Macaca_fascicularis
ENSPEMG00000020979	-	89	95.775	ENSMMUG00000023139	SNURF	89	95.794	Macaca_mulatta
ENSPEMG00000020979	-	89	95.775	ENSMNEG00000031291	SNRPN	89	95.794	Macaca_nemestrina
ENSPEMG00000020979	-	89	95.775	ENSMLEG00000038837	SNRPN	89	95.794	Mandrillus_leucophaeus
ENSPEMG00000020979	-	98	82.051	ENSMGAG00000008696	SNRPN	98	82.051	Meleagris_gallopavo
ENSPEMG00000020979	-	89	95.775	ENSMAUG00000000051	Snrpn	93	95.794	Mesocricetus_auratus
ENSPEMG00000020979	-	89	95.775	ENSMICG00000042356	SNRPN	89	95.794	Microcebus_murinus
ENSPEMG00000020979	-	89	95.775	ENSMOCG00000015350	Snrpn	89	95.794	Microtus_ochrogaster
ENSPEMG00000020979	-	89	95.775	MGP_CAROLIEiJ_G0029815	Snrpn	89	95.794	Mus_caroli
ENSPEMG00000020979	-	89	95.775	ENSMUSG00000102252	Snrpn	89	95.794	Mus_musculus
ENSPEMG00000020979	-	89	95.775	MGP_PahariEiJ_G0013040	Snrpn	89	95.794	Mus_pahari
ENSPEMG00000020979	-	89	95.775	MGP_SPRETEiJ_G0030918	Snrpn	89	95.794	Mus_spretus
ENSPEMG00000020979	-	74	55.866	ENSMPUG00000007115	-	64	68.310	Mustela_putorius_furo
ENSPEMG00000020979	-	95	95.175	ENSMPUG00000014638	-	95	95.175	Mustela_putorius_furo
ENSPEMG00000020979	-	85	59.314	ENSMLUG00000025849	-	72	61.538	Myotis_lucifugus
ENSPEMG00000020979	-	95	59.211	ENSMLUG00000024428	-	62	67.407	Myotis_lucifugus
ENSPEMG00000020979	-	95	94.714	ENSMLUG00000023361	-	93	94.714	Myotis_lucifugus
ENSPEMG00000020979	-	89	95.775	ENSNGAG00000000181	Snrpn	89	95.794	Nannospalax_galili
ENSPEMG00000020979	-	89	78.404	ENSNLEG00000001376	SNRPN	89	78.505	Nomascus_leucogenys
ENSPEMG00000020979	-	89	94.836	ENSODEG00000020110	-	89	94.860	Octodon_degus
ENSPEMG00000020979	-	100	91.667	ENSODEG00000019708	-	90	94.860	Octodon_degus
ENSPEMG00000020979	-	98	77.350	ENSODEG00000016065	-	73	89.441	Octodon_degus
ENSPEMG00000020979	-	89	95.305	ENSODEG00000013478	-	89	95.327	Octodon_degus
ENSPEMG00000020979	-	89	95.327	ENSOCUG00000003532	-	89	94.884	Oryctolagus_cuniculus
ENSPEMG00000020979	-	74	89.831	ENSORLG00020007490	SNRPN	69	91.071	Oryzias_latipes_hni
ENSPEMG00000020979	-	74	89.831	ENSORLG00015003332	SNRPN	69	91.071	Oryzias_latipes_hsok
ENSPEMG00000020979	-	74	90.395	ENSOMEG00000002066	SNRPN	69	91.667	Oryzias_melastigma
ENSPEMG00000020979	-	89	95.775	ENSOGAG00000007392	SNRPN	89	95.794	Otolemur_garnettii
ENSPEMG00000020979	-	95	94.298	ENSOARG00000009080	SNRPN	95	94.298	Ovis_aries
ENSPEMG00000020979	-	98	64.407	ENSPPAG00000034049	-	65	76.224	Pan_paniscus
ENSPEMG00000020979	-	89	95.775	ENSPPAG00000027650	SNRPN	89	95.794	Pan_paniscus
ENSPEMG00000020979	-	95	95.175	ENSPPRG00000019878	-	95	95.175	Panthera_pardus
ENSPEMG00000020979	-	85	62.255	ENSPPRG00000006957	-	73	69.536	Panthera_pardus
ENSPEMG00000020979	-	95	94.737	ENSPTIG00000004537	SNRPN	95	94.737	Panthera_tigris_altaica
ENSPEMG00000020979	-	89	95.775	ENSPTRG00000006826	SNRPN	89	95.794	Pan_troglodytes
ENSPEMG00000020979	-	98	64.831	ENSPTRG00000052400	-	65	76.923	Pan_troglodytes
ENSPEMG00000020979	-	89	95.775	ENSPANG00000020142	SNRPN	89	95.794	Papio_anubis
ENSPEMG00000020979	-	76	95.055	ENSPCIG00000004699	-	68	91.080	Phascolarctos_cinereus
ENSPEMG00000020979	-	72	90.173	ENSPMEG00000020674	SNRPN	69	91.071	Poecilia_mexicana
ENSPEMG00000020979	-	89	95.775	ENSPPYG00000006269	SNURF	89	95.794	Pongo_abelii
ENSPEMG00000020979	-	89	95.775	ENSPCOG00000014231	SNRPN	89	95.794	Propithecus_coquereli
ENSPEMG00000020979	-	89	95.775	ENSRNOG00000059764	Snrpn	89	95.794	Rattus_norvegicus
ENSPEMG00000020979	-	89	95.775	ENSRBIG00000041765	SNRPN	89	95.794	Rhinopithecus_bieti
ENSPEMG00000020979	-	89	95.775	ENSRROG00000035157	SNRPN	89	95.794	Rhinopithecus_roxellana
ENSPEMG00000020979	-	95	94.298	ENSSBOG00000024929	-	95	94.298	Saimiri_boliviensis_boliviensis
ENSPEMG00000020979	-	89	95.775	ENSSBOG00000000110	-	89	95.794	Saimiri_boliviensis_boliviensis
ENSPEMG00000020979	-	76	94.536	ENSSHAG00000010257	-	88	90.654	Sarcophilus_harrisii
ENSPEMG00000020979	-	95	94.737	ENSSSCG00000028124	SNRPN	95	94.737	Sus_scrofa
ENSPEMG00000020979	-	95	94.298	ENSTTRG00000010966	SNRPN	84	94.298	Tursiops_truncatus
ENSPEMG00000020979	-	86	95.169	ENSUAMG00000016284	SNRPN	72	95.192	Ursus_americanus
ENSPEMG00000020979	-	95	95.175	ENSUMAG00000025589	SNRPN	95	95.175	Ursus_maritimus
ENSPEMG00000020979	-	89	95.305	ENSVVUG00000017971	SNRPN	88	95.327	Vulpes_vulpes