EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000021205 (Gene tree)
Gene ID: 102928433
Gene Symbol: Urb1
Alias: -
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 60340 bases
Position: chrKI615516.1:860004-920343
Accession: 102928433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000024484	Npa1	PF11707.8	4.1e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000028866	-	6879	XM_006983539	ENSPEMP00000024484	2292 (aa)	XP_006983601	-

Gene Model

Click here to download ENSPEMG00000021205's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000021205's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000021205	Urb1	99	77.130	ENSG00000142207	URB1	99	77.038	Homo_sapiens
ENSPEMG00000021205	Urb1	98	42.826	ENSAPOG00000020308	urb1	99	42.813	Acanthochromis_polyacanthus
ENSPEMG00000021205	Urb1	99	73.980	ENSAMEG00000011998	URB1	100	73.980	Ailuropoda_melanoleuca
ENSPEMG00000021205	Urb1	94	44.347	ENSACIG00000003248	urb1	97	44.485	Amphilophus_citrinellus
ENSPEMG00000021205	Urb1	98	41.013	ENSAOCG00000010364	urb1	98	41.049	Amphiprion_ocellaris
ENSPEMG00000021205	Urb1	95	51.592	ENSAPEG00000010758	urb1	98	51.592	Amphiprion_percula
ENSPEMG00000021205	Urb1	97	43.530	ENSATEG00000011790	urb1	97	43.530	Anabas_testudineus
ENSPEMG00000021205	Urb1	96	54.860	ENSAPLG00000012791	URB1	100	54.860	Anas_platyrhynchos
ENSPEMG00000021205	Urb1	99	51.889	ENSACAG00000002817	URB1	99	52.193	Anolis_carolinensis
ENSPEMG00000021205	Urb1	99	76.144	ENSANAG00000024617	URB1	99	76.144	Aotus_nancymaae
ENSPEMG00000021205	Urb1	98	45.002	ENSACLG00000024865	urb1	99	45.002	Astatotilapia_calliptera
ENSPEMG00000021205	Urb1	98	39.938	ENSAMXG00000012306	urb1	99	40.009	Astyanax_mexicanus
ENSPEMG00000021205	Urb1	99	71.968	ENSBTAG00000012412	URB1	99	71.968	Bos_taurus
ENSPEMG00000021205	Urb1	99	76.033	ENSCJAG00000009118	URB1	99	76.033	Callithrix_jacchus
ENSPEMG00000021205	Urb1	99	74.584	ENSCAFG00000008892	URB1	100	74.584	Canis_familiaris
ENSPEMG00000021205	Urb1	99	74.386	ENSCAFG00020025987	-	100	74.386	Canis_lupus_dingo
ENSPEMG00000021205	Urb1	99	73.596	ENSCAFG00020025994	-	100	73.596	Canis_lupus_dingo
ENSPEMG00000021205	Urb1	99	71.379	ENSCHIG00000015645	URB1	100	71.379	Capra_hircus
ENSPEMG00000021205	Urb1	99	76.611	ENSTSYG00000013286	URB1	99	76.675	Carlito_syrichta
ENSPEMG00000021205	Urb1	97	74.166	ENSCAPG00000015589	URB1	99	74.166	Cavia_aperea
ENSPEMG00000021205	Urb1	99	75.275	ENSCPOG00000006748	URB1	99	75.275	Cavia_porcellus
ENSPEMG00000021205	Urb1	99	76.352	ENSCCAG00000021299	URB1	100	76.352	Cebus_capucinus
ENSPEMG00000021205	Urb1	99	76.730	ENSCATG00000042630	URB1	99	76.730	Cercocebus_atys
ENSPEMG00000021205	Urb1	99	76.323	ENSCLAG00000005262	URB1	99	76.323	Chinchilla_lanigera
ENSPEMG00000021205	Urb1	99	75.252	ENSCSAG00000009584	URB1	99	75.252	Chlorocebus_sabaeus
ENSPEMG00000021205	Urb1	99	57.000	ENSCPBG00000006454	URB1	99	57.000	Chrysemys_picta_bellii
ENSPEMG00000021205	Urb1	99	76.642	ENSCANG00000031088	URB1	99	76.642	Colobus_angolensis_palliatus
ENSPEMG00000021205	Urb1	97	89.102	ENSCGRG00001010616	Urb1	99	88.757	Cricetulus_griseus_chok1gshd
ENSPEMG00000021205	Urb1	97	88.514	ENSCGRG00000015840	Urb1	99	88.514	Cricetulus_griseus_crigri
ENSPEMG00000021205	Urb1	96	47.222	ENSCSEG00000012616	urb1	99	47.222	Cynoglossus_semilaevis
ENSPEMG00000021205	Urb1	96	51.541	ENSCVAG00000009076	urb1	99	51.541	Cyprinodon_variegatus
ENSPEMG00000021205	Urb1	98	43.758	ENSDARG00000060308	urb1	99	43.802	Danio_rerio
ENSPEMG00000021205	Urb1	84	74.961	ENSDNOG00000015586	URB1	99	74.961	Dasypus_novemcinctus
ENSPEMG00000021205	Urb1	99	75.728	ENSDORG00000006735	Urb1	99	75.728	Dipodomys_ordii
ENSPEMG00000021205	Urb1	91	77.532	ENSETEG00000009080	URB1	92	77.532	Echinops_telfairi
ENSPEMG00000021205	Urb1	99	74.330	ENSEASG00005007711	URB1	100	74.330	Equus_asinus_asinus
ENSPEMG00000021205	Urb1	96	83.697	ENSECAG00000013206	URB1	100	83.697	Equus_caballus
ENSPEMG00000021205	Urb1	58	82.573	ENSEEUG00000003626	-	57	82.573	Erinaceus_europaeus
ENSPEMG00000021205	Urb1	98	44.494	ENSELUG00000020516	urb1	98	44.646	Esox_lucius
ENSPEMG00000021205	Urb1	99	74.041	ENSFCAG00000002177	URB1	99	74.009	Felis_catus
ENSPEMG00000021205	Urb1	97	50.510	ENSFALG00000004636	URB1	99	50.510	Ficedula_albicollis
ENSPEMG00000021205	Urb1	99	75.198	ENSFDAG00000007288	URB1	95	75.198	Fukomys_damarensis
ENSPEMG00000021205	Urb1	98	40.810	ENSFHEG00000000202	urb1	99	41.441	Fundulus_heteroclitus
ENSPEMG00000021205	Urb1	90	46.643	ENSGMOG00000001838	urb1	91	46.643	Gadus_morhua
ENSPEMG00000021205	Urb1	99	55.061	ENSGALG00000015887	URB1	99	55.061	Gallus_gallus
ENSPEMG00000021205	Urb1	93	52.335	ENSGAFG00000020694	urb1	98	52.335	Gambusia_affinis
ENSPEMG00000021205	Urb1	97	44.011	ENSGACG00000011703	urb1	99	43.879	Gasterosteus_aculeatus
ENSPEMG00000021205	Urb1	99	56.539	ENSGAGG00000022544	URB1	99	56.539	Gopherus_agassizii
ENSPEMG00000021205	Urb1	99	77.215	ENSGGOG00000000285	URB1	99	77.215	Gorilla_gorilla
ENSPEMG00000021205	Urb1	98	44.870	ENSHBUG00000001904	urb1	99	44.870	Haplochromis_burtoni
ENSPEMG00000021205	Urb1	99	74.359	ENSHGLG00000004907	URB1	99	74.294	Heterocephalus_glaber_female
ENSPEMG00000021205	Urb1	99	74.901	ENSHGLG00100010749	URB1	99	74.901	Heterocephalus_glaber_male
ENSPEMG00000021205	Urb1	72	45.476	ENSHCOG00000018683	urb1	97	46.080	Hippocampus_comes
ENSPEMG00000021205	Urb1	98	39.834	ENSIPUG00000014721	urb1	99	39.791	Ictalurus_punctatus
ENSPEMG00000021205	Urb1	99	76.930	ENSSTOG00000004539	URB1	99	76.930	Ictidomys_tridecemlineatus
ENSPEMG00000021205	Urb1	92	47.168	ENSKMAG00000006001	urb1	99	47.091	Kryptolebias_marmoratus
ENSPEMG00000021205	Urb1	93	49.576	ENSLBEG00000027208	urb1	99	49.576	Labrus_bergylta
ENSPEMG00000021205	Urb1	99	47.841	ENSLACG00000017059	URB1	100	47.841	Latimeria_chalumnae
ENSPEMG00000021205	Urb1	97	45.614	ENSLOCG00000009190	urb1	99	45.614	Lepisosteus_oculatus
ENSPEMG00000021205	Urb1	99	72.093	ENSLAFG00000010407	URB1	99	72.093	Loxodonta_africana
ENSPEMG00000021205	Urb1	99	76.598	ENSMFAG00000034391	URB1	96	76.598	Macaca_fascicularis
ENSPEMG00000021205	Urb1	99	76.509	ENSMMUG00000010295	URB1	99	76.509	Macaca_mulatta
ENSPEMG00000021205	Urb1	99	75.198	ENSMNEG00000032981	URB1	99	75.198	Macaca_nemestrina
ENSPEMG00000021205	Urb1	99	76.818	ENSMLEG00000041435	URB1	99	76.818	Mandrillus_leucophaeus
ENSPEMG00000021205	Urb1	98	43.149	ENSMAMG00000011238	urb1	98	43.104	Mastacembelus_armatus
ENSPEMG00000021205	Urb1	95	53.409	ENSMZEG00005011862	urb1	99	53.409	Maylandia_zebra
ENSPEMG00000021205	Urb1	97	55.071	ENSMGAG00000014512	URB1	99	55.071	Meleagris_gallopavo
ENSPEMG00000021205	Urb1	92	85.644	ENSMAUG00000010516	Urb1	99	85.644	Mesocricetus_auratus
ENSPEMG00000021205	Urb1	99	76.004	ENSMICG00000016424	URB1	99	76.004	Microcebus_murinus
ENSPEMG00000021205	Urb1	99	87.302	ENSMOCG00000012613	Urb1	99	87.302	Microtus_ochrogaster
ENSPEMG00000021205	Urb1	99	61.626	ENSMODG00000021076	URB1	99	61.626	Monodelphis_domestica
ENSPEMG00000021205	Urb1	96	42.612	ENSMALG00000017411	urb1	97	50.951	Monopterus_albus
ENSPEMG00000021205	Urb1	99	85.469	MGP_CAROLIEiJ_G0020948	Urb1	99	85.469	Mus_caroli
ENSPEMG00000021205	Urb1	99	85.821	ENSMUSG00000039929	Urb1	99	85.821	Mus_musculus
ENSPEMG00000021205	Urb1	99	85.997	MGP_PahariEiJ_G0016653	Urb1	99	85.997	Mus_pahari
ENSPEMG00000021205	Urb1	99	85.777	MGP_SPRETEiJ_G0021854	Urb1	99	85.777	Mus_spretus
ENSPEMG00000021205	Urb1	99	73.786	ENSMPUG00000001123	URB1	99	73.786	Mustela_putorius_furo
ENSPEMG00000021205	Urb1	99	78.502	ENSNGAG00000001905	Urb1	99	78.502	Nannospalax_galili
ENSPEMG00000021205	Urb1	80	45.423	ENSNBRG00000001049	urb1	98	45.423	Neolamprologus_brichardi
ENSPEMG00000021205	Urb1	99	75.188	ENSNLEG00000026872	URB1	99	75.099	Nomascus_leucogenys
ENSPEMG00000021205	Urb1	95	57.527	ENSMEUG00000010828	URB1	96	57.719	Notamacropus_eugenii
ENSPEMG00000021205	Urb1	99	69.556	ENSOPRG00000013482	URB1	99	69.556	Ochotona_princeps
ENSPEMG00000021205	Urb1	99	74.647	ENSODEG00000002587	URB1	99	74.647	Octodon_degus
ENSPEMG00000021205	Urb1	98	45.046	ENSONIG00000005599	urb1	99	45.046	Oreochromis_niloticus
ENSPEMG00000021205	Urb1	99	75.099	ENSOCUG00000009381	URB1	99	75.099	Oryctolagus_cuniculus
ENSPEMG00000021205	Urb1	98	43.425	ENSORLG00000003429	urb1	99	43.444	Oryzias_latipes
ENSPEMG00000021205	Urb1	98	43.474	ENSORLG00020013785	urb1	99	43.406	Oryzias_latipes_hni
ENSPEMG00000021205	Urb1	98	42.264	ENSORLG00015019421	urb1	97	46.141	Oryzias_latipes_hsok
ENSPEMG00000021205	Urb1	76	50.352	ENSOMEG00000002094	urb1	98	50.352	Oryzias_melastigma
ENSPEMG00000021205	Urb1	99	75.607	ENSOGAG00000017140	URB1	99	75.827	Otolemur_garnettii
ENSPEMG00000021205	Urb1	95	73.090	ENSOARG00000013679	URB1	99	73.090	Ovis_aries
ENSPEMG00000021205	Urb1	99	77.259	ENSPPAG00000003423	URB1	99	77.259	Pan_paniscus
ENSPEMG00000021205	Urb1	99	74.306	ENSPPRG00000023131	URB1	99	74.306	Panthera_pardus
ENSPEMG00000021205	Urb1	90	73.492	ENSPTIG00000016125	URB1	97	73.492	Panthera_tigris_altaica
ENSPEMG00000021205	Urb1	99	77.126	ENSPTRG00000013852	URB1	99	77.126	Pan_troglodytes
ENSPEMG00000021205	Urb1	99	76.906	ENSPANG00000021964	URB1	99	76.906	Papio_anubis
ENSPEMG00000021205	Urb1	98	45.994	ENSPKIG00000003683	urb1	98	46.086	Paramormyrops_kingsleyae
ENSPEMG00000021205	Urb1	78	33.595	ENSPMAG00000009733	URB1	99	35.035	Petromyzon_marinus
ENSPEMG00000021205	Urb1	99	61.157	ENSPCIG00000016350	URB1	99	61.269	Phascolarctos_cinereus
ENSPEMG00000021205	Urb1	95	42.580	ENSPLAG00000004371	urb1	99	42.580	Poecilia_latipinna
ENSPEMG00000021205	Urb1	98	43.046	ENSPMEG00000006634	urb1	99	43.046	Poecilia_mexicana
ENSPEMG00000021205	Urb1	98	43.540	ENSPREG00000013453	urb1	98	43.540	Poecilia_reticulata
ENSPEMG00000021205	Urb1	99	76.631	ENSPPYG00000011359	URB1	99	76.540	Pongo_abelii
ENSPEMG00000021205	Urb1	99	63.760	ENSPCAG00000007430	URB1	99	64.113	Procavia_capensis
ENSPEMG00000021205	Urb1	99	77.052	ENSPCOG00000022695	URB1	99	77.052	Propithecus_coquereli
ENSPEMG00000021205	Urb1	99	72.967	ENSPVAG00000000889	URB1	100	72.967	Pteropus_vampyrus
ENSPEMG00000021205	Urb1	98	43.615	ENSPNYG00000010589	urb1	99	43.615	Pundamilia_nyererei
ENSPEMG00000021205	Urb1	98	39.642	ENSPNAG00000019324	urb1	99	39.599	Pygocentrus_nattereri
ENSPEMG00000021205	Urb1	99	85.790	ENSRNOG00000002080	Urb1	99	85.966	Rattus_norvegicus
ENSPEMG00000021205	Urb1	99	76.520	ENSRBIG00000033122	URB1	99	76.520	Rhinopithecus_bieti
ENSPEMG00000021205	Urb1	99	76.608	ENSRROG00000040237	URB1	99	76.608	Rhinopithecus_roxellana
ENSPEMG00000021205	Urb1	99	76.460	ENSSBOG00000027672	URB1	100	76.460	Saimiri_boliviensis_boliviensis
ENSPEMG00000021205	Urb1	99	61.007	ENSSHAG00000005140	URB1	100	60.929	Sarcophilus_harrisii
ENSPEMG00000021205	Urb1	92	45.356	ENSSFOG00015000339	urb1	99	45.403	Scleropages_formosus
ENSPEMG00000021205	Urb1	98	43.898	ENSSMAG00000003782	urb1	99	43.720	Scophthalmus_maximus
ENSPEMG00000021205	Urb1	99	44.038	ENSSDUG00000012313	urb1	99	44.028	Seriola_dumerili
ENSPEMG00000021205	Urb1	98	44.079	ENSSLDG00000023179	urb1	99	44.079	Seriola_lalandi_dorsalis
ENSPEMG00000021205	Urb1	99	53.742	ENSSPUG00000012447	URB1	99	53.742	Sphenodon_punctatus
ENSPEMG00000021205	Urb1	99	43.995	ENSSPAG00000006325	urb1	99	43.946	Stegastes_partitus
ENSPEMG00000021205	Urb1	99	73.090	ENSSSCG00000032024	URB1	100	73.146	Sus_scrofa
ENSPEMG00000021205	Urb1	73	57.023	ENSTGUG00000013442	URB1	99	57.023	Taeniopygia_guttata
ENSPEMG00000021205	Urb1	98	43.747	ENSTRUG00000009372	urb1	98	43.565	Takifugu_rubripes
ENSPEMG00000021205	Urb1	98	42.901	ENSTNIG00000016277	urb1	99	42.813	Tetraodon_nigroviridis
ENSPEMG00000021205	Urb1	80	78.386	ENSTBEG00000010044	URB1	81	78.386	Tupaia_belangeri
ENSPEMG00000021205	Urb1	90	74.528	ENSTTRG00000007712	URB1	92	74.528	Tursiops_truncatus
ENSPEMG00000021205	Urb1	99	73.936	ENSUAMG00000012231	URB1	99	73.936	Ursus_americanus
ENSPEMG00000021205	Urb1	92	74.805	ENSUMAG00000017419	URB1	99	74.805	Ursus_maritimus
ENSPEMG00000021205	Urb1	67	86.897	ENSVPAG00000001164	URB1	68	86.897	Vicugna_pacos
ENSPEMG00000021205	Urb1	99	74.189	ENSVVUG00000000551	URB1	100	74.189	Vulpes_vulpes
ENSPEMG00000021205	Urb1	98	48.379	ENSXETG00000009895	urb1	99	48.422	Xenopus_tropicalis
ENSPEMG00000021205	Urb1	98	41.036	ENSXCOG00000005500	urb1	98	44.812	Xiphophorus_couchianus
ENSPEMG00000021205	Urb1	98	41.028	ENSXMAG00000007253	urb1	98	44.886	Xiphophorus_maculatus