EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000021416 (Gene tree)
Gene ID: 102912078
Gene Symbol: Srsf1
Alias: -
Full Name: serine and arginine rich splicing factor 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 3960 bases
Position: chrKI615334.1:11545637-11549596
Accession: 102912078
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000024796	RRM_1	PF00076.22	1.3e-33	1	2
ENSPEMP00000024796	RRM_1	PF00076.22	1.3e-33	2	2
ENSPEMP00000024797	RRM_1	PF00076.22	1.4e-33	1	2
ENSPEMP00000024797	RRM_1	PF00076.22	1.4e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000029180	-	762	-	ENSPEMP00000024797	253 (aa)	-	UPI00002010B7
ENSPEMT00000029179	-	2782	XM_006972034	ENSPEMP00000024796	248 (aa)	XP_006972096	UPI0000001220

Gene Model

Click here to download ENSPEMG00000021416's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000021416's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000021416	Srsf1	65	46.988	ENSPEMG00000020173	Srsf5	60	45.509
ENSPEMG00000021416	Srsf1	96	65.000	ENSPEMG00000016311	Srsf9	82	68.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000021416	Srsf1	100	100.000	ENSG00000136450	SRSF1	100	100.000	Homo_sapiens
ENSPEMG00000021416	Srsf1	79	91.133	ENSAPOG00000008542	-	100	86.220	Acanthochromis_polyacanthus
ENSPEMG00000021416	Srsf1	78	91.710	ENSAPOG00000002748	-	98	84.362	Acanthochromis_polyacanthus
ENSPEMG00000021416	Srsf1	100	97.177	ENSAMEG00000002635	SRSF1	100	97.177	Ailuropoda_melanoleuca
ENSPEMG00000021416	Srsf1	88	86.099	ENSACIG00000008091	srsf1a	98	78.926	Amphilophus_citrinellus
ENSPEMG00000021416	Srsf1	88	86.547	ENSAOCG00000010671	-	98	85.185	Amphiprion_ocellaris
ENSPEMG00000021416	Srsf1	79	91.133	ENSAOCG00000000337	-	100	86.508	Amphiprion_ocellaris
ENSPEMG00000021416	Srsf1	88	86.547	ENSAPEG00000009915	-	98	85.185	Amphiprion_percula
ENSPEMG00000021416	Srsf1	79	91.133	ENSAPEG00000023352	-	99	86.561	Amphiprion_percula
ENSPEMG00000021416	Srsf1	78	92.228	ENSATEG00000022403	-	98	84.898	Anabas_testudineus
ENSPEMG00000021416	Srsf1	82	87.192	ENSATEG00000021567	-	100	84.959	Anabas_testudineus
ENSPEMG00000021416	Srsf1	100	98.387	ENSACAG00000005542	-	100	98.387	Anolis_carolinensis
ENSPEMG00000021416	Srsf1	81	73.500	ENSANAG00000025417	-	99	76.016	Aotus_nancymaae
ENSPEMG00000021416	Srsf1	100	100.000	ENSANAG00000020583	-	100	100.000	Aotus_nancymaae
ENSPEMG00000021416	Srsf1	54	78.065	ENSAMXG00000024373	-	94	77.778	Astyanax_mexicanus
ENSPEMG00000021416	Srsf1	94	91.632	ENSAMXG00000035996	srsf1a	98	93.145	Astyanax_mexicanus
ENSPEMG00000021416	Srsf1	100	100.000	ENSBTAG00000014766	SRSF1	100	100.000	Bos_taurus
ENSPEMG00000021416	Srsf1	79	91.837	ENSCJAG00000008111	-	88	91.371	Callithrix_jacchus
ENSPEMG00000021416	Srsf1	100	100.000	ENSCJAG00000041713	-	100	100.000	Callithrix_jacchus
ENSPEMG00000021416	Srsf1	100	100.000	ENSCAFG00000017430	SRSF1	100	100.000	Canis_familiaris
ENSPEMG00000021416	Srsf1	100	100.000	ENSCAFG00020025632	-	100	100.000	Canis_lupus_dingo
ENSPEMG00000021416	Srsf1	100	100.000	ENSCHIG00000010787	SRSF1	100	100.000	Capra_hircus
ENSPEMG00000021416	Srsf1	100	100.000	ENSTSYG00000013899	-	100	100.000	Carlito_syrichta
ENSPEMG00000021416	Srsf1	100	100.000	ENSCPOG00000032681	-	100	100.000	Cavia_porcellus
ENSPEMG00000021416	Srsf1	100	100.000	ENSCCAG00000029484	-	100	100.000	Cebus_capucinus
ENSPEMG00000021416	Srsf1	100	100.000	ENSCATG00000042294	-	100	100.000	Cercocebus_atys
ENSPEMG00000021416	Srsf1	100	100.000	ENSCLAG00000014707	-	100	100.000	Chinchilla_lanigera
ENSPEMG00000021416	Srsf1	100	99.209	ENSCSAG00000005642	-	100	99.209	Chlorocebus_sabaeus
ENSPEMG00000021416	Srsf1	100	100.000	ENSCHOG00000001899	SRSF1	100	100.000	Choloepus_hoffmanni
ENSPEMG00000021416	Srsf1	100	98.814	ENSCPBG00000009851	-	100	98.814	Chrysemys_picta_bellii
ENSPEMG00000021416	Srsf1	100	100.000	ENSCANG00000029726	-	100	100.000	Colobus_angolensis_palliatus
ENSPEMG00000021416	Srsf1	100	100.000	ENSCGRG00001000670	Srsf1	100	100.000	Cricetulus_griseus_chok1gshd
ENSPEMG00000021416	Srsf1	100	100.000	ENSCGRG00000005590	Srsf1	100	100.000	Cricetulus_griseus_crigri
ENSPEMG00000021416	Srsf1	78	91.327	ENSCSEG00000014272	-	98	84.553	Cynoglossus_semilaevis
ENSPEMG00000021416	Srsf1	79	83.962	ENSCSEG00000009973	-	100	80.303	Cynoglossus_semilaevis
ENSPEMG00000021416	Srsf1	78	92.228	ENSCVAG00000018617	-	98	85.185	Cyprinodon_variegatus
ENSPEMG00000021416	Srsf1	78	89.744	ENSCVAG00000005458	-	98	86.179	Cyprinodon_variegatus
ENSPEMG00000021416	Srsf1	99	96.735	ENSDARG00000017843	srsf1b	99	96.735	Danio_rerio
ENSPEMG00000021416	Srsf1	78	89.706	ENSDARG00000057691	srsf1a	98	92.095	Danio_rerio
ENSPEMG00000021416	Srsf1	100	100.000	ENSDNOG00000011737	-	100	100.000	Dasypus_novemcinctus
ENSPEMG00000021416	Srsf1	100	100.000	ENSDORG00000015082	Srsf1	100	100.000	Dipodomys_ordii
ENSPEMG00000021416	Srsf1	74	98.913	ENSETEG00000005349	-	63	98.913	Echinops_telfairi
ENSPEMG00000021416	Srsf1	100	100.000	ENSEASG00005002922	-	100	100.000	Equus_asinus_asinus
ENSPEMG00000021416	Srsf1	100	100.000	ENSECAG00000016654	SRSF1	100	100.000	Equus_caballus
ENSPEMG00000021416	Srsf1	74	100.000	ENSEEUG00000009255	-	63	100.000	Erinaceus_europaeus
ENSPEMG00000021416	Srsf1	78	93.299	ENSELUG00000021646	srsf1a	98	79.839	Esox_lucius
ENSPEMG00000021416	Srsf1	100	100.000	ENSFCAG00000002250	-	100	100.000	Felis_catus
ENSPEMG00000021416	Srsf1	100	82.213	ENSFALG00000005062	-	100	82.213	Ficedula_albicollis
ENSPEMG00000021416	Srsf1	100	100.000	ENSFDAG00000010646	-	100	100.000	Fukomys_damarensis
ENSPEMG00000021416	Srsf1	88	86.547	ENSFHEG00000003174	srsf1a	98	85.185	Fundulus_heteroclitus
ENSPEMG00000021416	Srsf1	80	89.394	ENSGMOG00000014787	-	99	82.645	Gadus_morhua
ENSPEMG00000021416	Srsf1	100	98.790	ENSGALG00000005525	SRSF1	100	98.790	Gallus_gallus
ENSPEMG00000021416	Srsf1	79	86.802	ENSGACG00000020621	srsf1b	100	74.390	Gasterosteus_aculeatus
ENSPEMG00000021416	Srsf1	100	98.814	ENSGAGG00000022965	-	100	98.814	Gopherus_agassizii
ENSPEMG00000021416	Srsf1	100	100.000	ENSGGOG00000004386	SRSF1	100	100.000	Gorilla_gorilla
ENSPEMG00000021416	Srsf1	88	86.099	ENSHBUG00000016788	srsf1a	98	84.774	Haplochromis_burtoni
ENSPEMG00000021416	Srsf1	87	100.000	ENSHGLG00000000600	-	100	100.000	Heterocephalus_glaber_female
ENSPEMG00000021416	Srsf1	87	100.000	ENSHGLG00000000669	-	100	100.000	Heterocephalus_glaber_female
ENSPEMG00000021416	Srsf1	100	100.000	ENSHGLG00100016906	-	100	100.000	Heterocephalus_glaber_male
ENSPEMG00000021416	Srsf1	78	87.310	ENSHCOG00000018918	srsf1a	97	81.928	Hippocampus_comes
ENSPEMG00000021416	Srsf1	94	91.213	ENSIPUG00000017039	srsf1a	98	93.145	Ictalurus_punctatus
ENSPEMG00000021416	Srsf1	100	95.968	ENSIPUG00000008750	srsf1b	100	95.968	Ictalurus_punctatus
ENSPEMG00000021416	Srsf1	100	100.000	ENSSTOG00000000243	-	100	100.000	Ictidomys_tridecemlineatus
ENSPEMG00000021416	Srsf1	51	92.126	ENSJJAG00000014464	-	95	88.189	Jaculus_jaculus
ENSPEMG00000021416	Srsf1	100	100.000	ENSJJAG00000000102	-	100	100.000	Jaculus_jaculus
ENSPEMG00000021416	Srsf1	78	92.228	ENSKMAG00000019232	srsf1a	98	83.951	Kryptolebias_marmoratus
ENSPEMG00000021416	Srsf1	88	85.650	ENSLBEG00000020864	-	98	84.362	Labrus_bergylta
ENSPEMG00000021416	Srsf1	79	84.500	ENSLBEG00000015294	-	98	83.133	Labrus_bergylta
ENSPEMG00000021416	Srsf1	78	94.845	ENSLACG00000014160	srsf1a	92	93.878	Latimeria_chalumnae
ENSPEMG00000021416	Srsf1	100	97.177	ENSLOCG00000005994	srsf1a	100	97.177	Lepisosteus_oculatus
ENSPEMG00000021416	Srsf1	100	100.000	ENSLAFG00000025743	SRSF1	100	100.000	Loxodonta_africana
ENSPEMG00000021416	Srsf1	100	100.000	ENSMFAG00000040003	-	100	100.000	Macaca_fascicularis
ENSPEMG00000021416	Srsf1	100	97.233	ENSMMUG00000003260	-	100	97.233	Macaca_mulatta
ENSPEMG00000021416	Srsf1	100	100.000	ENSMMUG00000004725	SRSF1	100	100.000	Macaca_mulatta
ENSPEMG00000021416	Srsf1	100	96.838	ENSMNEG00000015983	-	100	96.838	Macaca_nemestrina
ENSPEMG00000021416	Srsf1	100	100.000	ENSMNEG00000027680	-	100	100.000	Macaca_nemestrina
ENSPEMG00000021416	Srsf1	100	94.466	ENSMLEG00000015243	-	100	94.466	Mandrillus_leucophaeus
ENSPEMG00000021416	Srsf1	100	100.000	ENSMLEG00000040509	SRSF1	100	100.000	Mandrillus_leucophaeus
ENSPEMG00000021416	Srsf1	79	90.355	ENSMAMG00000019687	-	100	85.081	Mastacembelus_armatus
ENSPEMG00000021416	Srsf1	78	92.228	ENSMAMG00000018454	-	98	85.185	Mastacembelus_armatus
ENSPEMG00000021416	Srsf1	79	94.924	ENSMAMG00000019691	-	100	88.211	Mastacembelus_armatus
ENSPEMG00000021416	Srsf1	100	100.000	ENSMAUG00000021845	Srsf1	100	100.000	Mesocricetus_auratus
ENSPEMG00000021416	Srsf1	100	100.000	ENSMICG00000013639	-	100	100.000	Microcebus_murinus
ENSPEMG00000021416	Srsf1	100	100.000	ENSMOCG00000001996	Srsf1	100	100.000	Microtus_ochrogaster
ENSPEMG00000021416	Srsf1	88	85.202	ENSMMOG00000014354	srsf1a	98	78.099	Mola_mola
ENSPEMG00000021416	Srsf1	74	98.919	ENSMODG00000014781	-	63	98.919	Monodelphis_domestica
ENSPEMG00000021416	Srsf1	82	77.941	ENSMALG00000007763	-	79	79.695	Monopterus_albus
ENSPEMG00000021416	Srsf1	78	91.710	ENSMALG00000017129	-	75	88.601	Monopterus_albus
ENSPEMG00000021416	Srsf1	100	100.000	MGP_CAROLIEiJ_G0016943	Srsf1	100	100.000	Mus_caroli
ENSPEMG00000021416	Srsf1	100	100.000	ENSMUSG00000018379	Srsf1	100	100.000	Mus_musculus
ENSPEMG00000021416	Srsf1	100	100.000	MGP_PahariEiJ_G0018074	Srsf1	100	100.000	Mus_pahari
ENSPEMG00000021416	Srsf1	100	100.000	MGP_SPRETEiJ_G0017790	Srsf1	100	100.000	Mus_spretus
ENSPEMG00000021416	Srsf1	100	100.000	ENSMPUG00000015369	SRSF1	100	100.000	Mustela_putorius_furo
ENSPEMG00000021416	Srsf1	100	100.000	ENSMLUG00000011040	SRSF1	100	100.000	Myotis_lucifugus
ENSPEMG00000021416	Srsf1	82	90.640	ENSMLUG00000023995	-	100	90.323	Myotis_lucifugus
ENSPEMG00000021416	Srsf1	100	100.000	ENSNGAG00000011395	Srsf1	100	100.000	Nannospalax_galili
ENSPEMG00000021416	Srsf1	100	79.839	ENSNBRG00000008041	srsf1b	80	82.741	Neolamprologus_brichardi
ENSPEMG00000021416	Srsf1	100	100.000	ENSNLEG00000008088	-	100	100.000	Nomascus_leucogenys
ENSPEMG00000021416	Srsf1	51	98.425	ENSMEUG00000002783	-	100	98.425	Notamacropus_eugenii
ENSPEMG00000021416	Srsf1	74	100.000	ENSOPRG00000001234	-	100	100.000	Ochotona_princeps
ENSPEMG00000021416	Srsf1	100	99.597	ENSODEG00000011481	-	100	99.597	Octodon_degus
ENSPEMG00000021416	Srsf1	78	91.710	ENSONIG00000013160	-	98	84.774	Oreochromis_niloticus
ENSPEMG00000021416	Srsf1	96	90.717	ENSONIG00000004860	-	81	90.863	Oreochromis_niloticus
ENSPEMG00000021416	Srsf1	100	70.238	ENSOCUG00000010894	-	77	71.795	Oryctolagus_cuniculus
ENSPEMG00000021416	Srsf1	78	92.228	ENSORLG00000004580	srsf1a	98	85.185	Oryzias_latipes
ENSPEMG00000021416	Srsf1	88	86.547	ENSORLG00020009456	srsf1a	98	85.185	Oryzias_latipes_hni
ENSPEMG00000021416	Srsf1	88	86.547	ENSORLG00015014384	srsf1a	98	84.774	Oryzias_latipes_hsok
ENSPEMG00000021416	Srsf1	71	90.341	ENSOMEG00000004106	srsf1a	92	82.743	Oryzias_melastigma
ENSPEMG00000021416	Srsf1	100	100.000	ENSOGAG00000025950	-	100	100.000	Otolemur_garnettii
ENSPEMG00000021416	Srsf1	100	95.161	ENSOARG00000008323	SRSF1	100	95.161	Ovis_aries
ENSPEMG00000021416	Srsf1	100	100.000	ENSPPAG00000043403	-	100	100.000	Pan_paniscus
ENSPEMG00000021416	Srsf1	100	100.000	ENSPPRG00000004238	-	100	100.000	Panthera_pardus
ENSPEMG00000021416	Srsf1	100	100.000	ENSPTRG00000049077	SRSF1	100	100.000	Pan_troglodytes
ENSPEMG00000021416	Srsf1	100	100.000	ENSPANG00000022305	-	100	100.000	Papio_anubis
ENSPEMG00000021416	Srsf1	100	77.075	ENSPANG00000030275	-	100	76.680	Papio_anubis
ENSPEMG00000021416	Srsf1	100	95.968	ENSPKIG00000012857	srsf1b	100	95.968	Paramormyrops_kingsleyae
ENSPEMG00000021416	Srsf1	99	95.102	ENSPKIG00000007204	srsf1a	99	95.102	Paramormyrops_kingsleyae
ENSPEMG00000021416	Srsf1	79	90.955	ENSPSIG00000009000	-	100	92.000	Pelodiscus_sinensis
ENSPEMG00000021416	Srsf1	88	83.857	ENSPMGG00000013112	-	99	85.654	Periophthalmus_magnuspinnatus
ENSPEMG00000021416	Srsf1	96	84.937	ENSPMGG00000005467	-	99	85.470	Periophthalmus_magnuspinnatus
ENSPEMG00000021416	Srsf1	100	99.197	ENSPCIG00000006076	-	100	99.197	Phascolarctos_cinereus
ENSPEMG00000021416	Srsf1	79	89.899	ENSPFOG00000018325	-	86	85.714	Poecilia_formosa
ENSPEMG00000021416	Srsf1	79	89.899	ENSPLAG00000008416	srsf1b	98	85.714	Poecilia_latipinna
ENSPEMG00000021416	Srsf1	50	89.431	ENSPMEG00000014312	-	98	87.805	Poecilia_mexicana
ENSPEMG00000021416	Srsf1	79	89.899	ENSPMEG00000002388	-	98	85.714	Poecilia_mexicana
ENSPEMG00000021416	Srsf1	50	89.431	ENSPMEG00000020607	-	98	87.805	Poecilia_mexicana
ENSPEMG00000021416	Srsf1	78	92.228	ENSPREG00000009667	srsf1a	98	85.185	Poecilia_reticulata
ENSPEMG00000021416	Srsf1	100	100.000	ENSPPYG00000008240	SRSF1	100	100.000	Pongo_abelii
ENSPEMG00000021416	Srsf1	100	100.000	ENSPCAG00000005199	SRSF1	100	100.000	Procavia_capensis
ENSPEMG00000021416	Srsf1	80	76.733	ENSPCOG00000025736	-	95	76.531	Propithecus_coquereli
ENSPEMG00000021416	Srsf1	100	100.000	ENSPCOG00000023654	-	100	100.000	Propithecus_coquereli
ENSPEMG00000021416	Srsf1	75	100.000	ENSPVAG00000000519	-	75	100.000	Pteropus_vampyrus
ENSPEMG00000021416	Srsf1	94	93.162	ENSPNAG00000022241	srsf1a	98	90.947	Pygocentrus_nattereri
ENSPEMG00000021416	Srsf1	100	94.355	ENSPNAG00000014601	srsf1b	100	94.355	Pygocentrus_nattereri
ENSPEMG00000021416	Srsf1	100	100.000	ENSRNOG00000050323	Srsf1	100	100.000	Rattus_norvegicus
ENSPEMG00000021416	Srsf1	100	100.000	ENSRBIG00000034445	-	100	100.000	Rhinopithecus_bieti
ENSPEMG00000021416	Srsf1	100	100.000	ENSRROG00000041506	-	100	100.000	Rhinopithecus_roxellana
ENSPEMG00000021416	Srsf1	100	100.000	ENSSBOG00000025377	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSPEMG00000021416	Srsf1	100	99.197	ENSSHAG00000002552	-	100	99.197	Sarcophilus_harrisii
ENSPEMG00000021416	Srsf1	99	96.356	ENSSFOG00015004800	srsf1a	99	96.356	Scleropages_formosus
ENSPEMG00000021416	Srsf1	78	90.674	ENSSMAG00000007018	-	98	83.128	Scophthalmus_maximus
ENSPEMG00000021416	Srsf1	94	87.083	ENSSMAG00000009719	-	100	86.275	Scophthalmus_maximus
ENSPEMG00000021416	Srsf1	100	76.494	ENSSDUG00000003929	-	99	77.510	Seriola_dumerili
ENSPEMG00000021416	Srsf1	88	85.650	ENSSDUG00000011303	-	98	84.362	Seriola_dumerili
ENSPEMG00000021416	Srsf1	79	83.838	ENSSLDG00000016868	-	99	82.661	Seriola_lalandi_dorsalis
ENSPEMG00000021416	Srsf1	95	76.695	ENSSLDG00000016895	-	99	76.113	Seriola_lalandi_dorsalis
ENSPEMG00000021416	Srsf1	78	91.192	ENSSLDG00000010543	-	98	84.362	Seriola_lalandi_dorsalis
ENSPEMG00000021416	Srsf1	74	100.000	ENSSARG00000010949	-	63	100.000	Sorex_araneus
ENSPEMG00000021416	Srsf1	100	98.814	ENSSPUG00000000804	-	100	98.814	Sphenodon_punctatus
ENSPEMG00000021416	Srsf1	78	92.746	ENSSPAG00000022562	-	98	85.597	Stegastes_partitus
ENSPEMG00000021416	Srsf1	79	88.038	ENSSPAG00000014152	-	99	84.556	Stegastes_partitus
ENSPEMG00000021416	Srsf1	100	100.000	ENSSSCG00000017626	-	100	100.000	Sus_scrofa
ENSPEMG00000021416	Srsf1	74	98.370	ENSTGUG00000008416	-	100	98.370	Taeniopygia_guttata
ENSPEMG00000021416	Srsf1	78	91.192	ENSTRUG00000003691	srsf1a	98	84.362	Takifugu_rubripes
ENSPEMG00000021416	Srsf1	78	91.192	ENSTNIG00000016223	srsf1a	98	84.362	Tetraodon_nigroviridis
ENSPEMG00000021416	Srsf1	74	98.370	ENSTBEG00000015378	-	63	98.370	Tupaia_belangeri
ENSPEMG00000021416	Srsf1	74	100.000	ENSTTRG00000007310	SRSF1	100	100.000	Tursiops_truncatus
ENSPEMG00000021416	Srsf1	100	100.000	ENSUAMG00000009858	SRSF1	100	100.000	Ursus_americanus
ENSPEMG00000021416	Srsf1	100	100.000	ENSUMAG00000000455	-	100	100.000	Ursus_maritimus
ENSPEMG00000021416	Srsf1	100	99.597	ENSVPAG00000010094	SRSF1	100	99.597	Vicugna_pacos
ENSPEMG00000021416	Srsf1	100	100.000	ENSVVUG00000011882	-	100	100.000	Vulpes_vulpes
ENSPEMG00000021416	Srsf1	100	95.968	ENSXETG00000008954	srsf1	100	91.386	Xenopus_tropicalis
ENSPEMG00000021416	Srsf1	78	92.228	ENSXMAG00000011766	srsf1a	98	85.185	Xiphophorus_maculatus