EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSPEMG00000021570 (Gene tree)
Gene ID: 102911209
Gene Symbol: Zkscan3
Alias: -
Full Name: zinc finger protein with KRAB and SCAN domains 3
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 12192 bases
Position: chrKI615704.1:745446-757637
Accession: 102911209
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000025023	zf-C2H2	PF00096.26	4.2e-44	1	7
ENSPEMP00000025023	zf-C2H2	PF00096.26	4.2e-44	2	7
ENSPEMP00000025023	zf-C2H2	PF00096.26	4.2e-44	3	7
ENSPEMP00000025023	zf-C2H2	PF00096.26	4.2e-44	4	7
ENSPEMP00000025023	zf-C2H2	PF00096.26	4.2e-44	5	7
ENSPEMP00000025023	zf-C2H2	PF00096.26	4.2e-44	6	7
ENSPEMP00000025023	zf-C2H2	PF00096.26	4.2e-44	7	7
ENSPEMP00000025023	zf-met	PF12874.7	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000029408	-	8171	XM_006988885	ENSPEMP00000025023	553 (aa)	XP_006988947	UPI00042A9E0C

Gene Model

Click here to download ENSPEMG00000021570's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000021570's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000021570	Zkscan3	59	50.218	ENSPEMG00000023883	-	98	49.115
ENSPEMG00000021570	Zkscan3	59	48.031	ENSPEMG00000014415	Zfp1	100	58.491
ENSPEMG00000021570	Zkscan3	59	45.455	ENSPEMG00000020749	-	100	39.777
ENSPEMG00000021570	Zkscan3	60	44.286	ENSPEMG00000016932	Bcl6b	51	44.286
ENSPEMG00000021570	Zkscan3	59	51.852	ENSPEMG00000021937	-	98	51.852
ENSPEMG00000021570	Zkscan3	62	51.502	ENSPEMG00000021548	Zfp712	99	51.082
ENSPEMG00000021570	Zkscan3	58	45.525	ENSPEMG00000020934	-	100	46.552
ENSPEMG00000021570	Zkscan3	55	51.799	ENSPEMG00000000860	Zfp94	93	51.799
ENSPEMG00000021570	Zkscan3	61	51.880	ENSPEMG00000007241	-	99	47.009
ENSPEMG00000021570	Zkscan3	62	48.026	ENSPEMG00000000548	-	98	47.761
ENSPEMG00000021570	Zkscan3	50	49.045	ENSPEMG00000011776	-	99	50.980
ENSPEMG00000021570	Zkscan3	59	47.436	ENSPEMG00000008173	-	99	47.788
ENSPEMG00000021570	Zkscan3	59	40.000	ENSPEMG00000015763	Zbtb41	55	40.000
ENSPEMG00000021570	Zkscan3	61	49.107	ENSPEMG00000017339	2610008E11Rik	96	49.107
ENSPEMG00000021570	Zkscan3	59	55.102	ENSPEMG00000023329	-	99	55.102
ENSPEMG00000021570	Zkscan3	63	35.433	ENSPEMG00000014980	Zfp64	86	36.453
ENSPEMG00000021570	Zkscan3	61	50.000	ENSPEMG00000000472	Zfp28	71	50.000
ENSPEMG00000021570	Zkscan3	59	50.676	ENSPEMG00000014281	-	100	61.404
ENSPEMG00000021570	Zkscan3	59	40.061	ENSPEMG00000022945	-	83	40.061
ENSPEMG00000021570	Zkscan3	59	54.362	ENSPEMG00000016507	Zfp26	89	54.362
ENSPEMG00000021570	Zkscan3	60	52.747	ENSPEMG00000007595	-	81	51.282
ENSPEMG00000021570	Zkscan3	58	33.108	ENSPEMG00000015523	Zfp423	69	39.535
ENSPEMG00000021570	Zkscan3	59	47.863	ENSPEMG00000008817	-	98	47.863