EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000021802 (Gene tree)
Gene ID: 102910702
Gene Symbol: Fubp1
Alias: -
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 26898 bases
Position: chrKI615737.1:1141700-1168597
Accession: 102910702
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000025342	KH_1	PF00013.29	1.7e-69	1	4
ENSPEMP00000025342	KH_1	PF00013.29	1.7e-69	2	4
ENSPEMP00000025342	KH_1	PF00013.29	1.7e-69	3	4
ENSPEMP00000025342	KH_1	PF00013.29	1.7e-69	4	4
ENSPEMP00000025341	KH_1	PF00013.29	6.8e-17	1	1
ENSPEMP00000025342	KH_2	PF07650.17	1.8e-22	1	2
ENSPEMP00000025342	KH_2	PF07650.17	1.8e-22	2	2
ENSPEMP00000025341	KH_2	PF07650.17	2.2e-06	1	1
ENSPEMP00000025342	DUF1897	PF09005.10	1.1e-11	1	2
ENSPEMP00000025342	DUF1897	PF09005.10	1.1e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000029727	-	4997	-	ENSPEMP00000025341	146 (aa)	-	-
ENSPEMT00000029728	-	4933	XM_006989496	ENSPEMP00000025342	653 (aa)	XP_006989558	UPI00042A9745

Gene Model

Click here to download ENSPEMG00000021802's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000021802's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000021802	Fubp1	100	53.020	ENSPEMG00000022853	Khsrp	62	68.000
ENSPEMG00000021802	Fubp1	58	34.524	ENSPEMG00000009276	Pcbp4	74	34.524
ENSPEMG00000021802	Fubp1	97	49.306	ENSPEMG00000019195	Fubp3	83	64.419
ENSPEMG00000021802	Fubp1	57	32.710	ENSPEMG00000000587	Pcbp3	66	31.858

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000021802	Fubp1	100	99.315	ENSG00000162613	FUBP1	100	97.872	Homo_sapiens
ENSPEMG00000021802	Fubp1	100	70.270	ENSAPOG00000014845	fubp1	70	76.703	Acanthochromis_polyacanthus
ENSPEMG00000021802	Fubp1	100	99.315	ENSAMEG00000007372	FUBP1	99	94.619	Ailuropoda_melanoleuca
ENSPEMG00000021802	Fubp1	100	70.270	ENSACIG00000020024	fubp1	69	74.945	Amphilophus_citrinellus
ENSPEMG00000021802	Fubp1	100	70.270	ENSAPEG00000012232	fubp1	72	77.704	Amphiprion_percula
ENSPEMG00000021802	Fubp1	99	71.145	ENSATEG00000018619	fubp1	70	78.842	Anabas_testudineus
ENSPEMG00000021802	Fubp1	100	96.599	ENSAPLG00000005965	FUBP1	100	97.195	Anas_platyrhynchos
ENSPEMG00000021802	Fubp1	95	92.086	ENSACAG00000006310	FUBP1	96	86.861	Anolis_carolinensis
ENSPEMG00000021802	Fubp1	100	70.270	ENSACLG00000006708	fubp1	72	78.842	Astatotilapia_calliptera
ENSPEMG00000021802	Fubp1	100	78.912	ENSAMXG00000005525	fubp1	64	86.337	Astyanax_mexicanus
ENSPEMG00000021802	Fubp1	100	99.315	ENSCJAG00000007062	FUBP1	100	97.720	Callithrix_jacchus
ENSPEMG00000021802	Fubp1	100	99.315	ENSCAFG00000020361	FUBP1	99	97.988	Canis_familiaris
ENSPEMG00000021802	Fubp1	100	98.630	ENSTSYG00000000148	FUBP1	100	98.220	Carlito_syrichta
ENSPEMG00000021802	Fubp1	57	98.535	ENSCAPG00000011052	-	67	98.535	Cavia_aperea
ENSPEMG00000021802	Fubp1	100	98.630	ENSCPOG00000002757	FUBP1	100	98.176	Cavia_porcellus
ENSPEMG00000021802	Fubp1	100	97.744	ENSCCAG00000036537	FUBP1	100	82.948	Cebus_capucinus
ENSPEMG00000021802	Fubp1	100	99.315	ENSCATG00000042126	FUBP1	100	97.720	Cercocebus_atys
ENSPEMG00000021802	Fubp1	100	99.315	ENSCLAG00000005621	FUBP1	100	99.359	Chinchilla_lanigera
ENSPEMG00000021802	Fubp1	100	99.315	ENSCSAG00000001402	FUBP1	99	97.833	Chlorocebus_sabaeus
ENSPEMG00000021802	Fubp1	100	97.945	ENSCHOG00000008177	FUBP1	100	97.720	Choloepus_hoffmanni
ENSPEMG00000021802	Fubp1	100	99.387	ENSCGRG00001007103	Fubp1	100	99.387	Cricetulus_griseus_chok1gshd
ENSPEMG00000021802	Fubp1	100	99.315	ENSCGRG00000003372	Fubp1	100	99.515	Cricetulus_griseus_crigri
ENSPEMG00000021802	Fubp1	100	70.270	ENSCSEG00000021412	fubp1	69	77.925	Cynoglossus_semilaevis
ENSPEMG00000021802	Fubp1	100	70.270	ENSCVAG00000014487	fubp1	60	84.986	Cyprinodon_variegatus
ENSPEMG00000021802	Fubp1	100	72.603	ENSDARG00000029248	fubp1	70	78.043	Danio_rerio
ENSPEMG00000021802	Fubp1	68	70.370	ENSDNOG00000034565	-	82	71.084	Dasypus_novemcinctus
ENSPEMG00000021802	Fubp1	100	98.630	ENSDORG00000016534	Fubp1	100	97.568	Dipodomys_ordii
ENSPEMG00000021802	Fubp1	77	98.834	ENSETEG00000000948	-	62	98.834	Echinops_telfairi
ENSPEMG00000021802	Fubp1	85	46.034	ENSEBUG00000016143	fubp1	64	65.152	Eptatretus_burgeri
ENSPEMG00000021802	Fubp1	100	99.315	ENSEEUG00000001287	FUBP1	100	84.347	Erinaceus_europaeus
ENSPEMG00000021802	Fubp1	100	77.551	ENSELUG00000007990	fubp1	70	75.328	Esox_lucius
ENSPEMG00000021802	Fubp1	100	96.599	ENSFALG00000005768	FUBP1	98	95.975	Ficedula_albicollis
ENSPEMG00000021802	Fubp1	100	99.315	ENSFDAG00000014210	FUBP1	100	99.315	Fukomys_damarensis
ENSPEMG00000021802	Fubp1	100	70.270	ENSFHEG00000005230	fubp1	70	79.470	Fundulus_heteroclitus
ENSPEMG00000021802	Fubp1	98	66.512	ENSGMOG00000003370	fubp1	70	70.510	Gadus_morhua
ENSPEMG00000021802	Fubp1	100	96.599	ENSGALG00000008939	FUBP1	99	96.440	Gallus_gallus
ENSPEMG00000021802	Fubp1	100	70.270	ENSGAFG00000020972	fubp1	91	78.899	Gambusia_affinis
ENSPEMG00000021802	Fubp1	99	69.799	ENSGACG00000016563	fubp1	70	76.718	Gasterosteus_aculeatus
ENSPEMG00000021802	Fubp1	100	70.270	ENSHBUG00000009835	fubp1	85	78.000	Haplochromis_burtoni
ENSPEMG00000021802	Fubp1	100	99.315	ENSHGLG00000008415	-	100	99.359	Heterocephalus_glaber_female
ENSPEMG00000021802	Fubp1	70	91.503	ENSHGLG00000002808	-	72	89.912	Heterocephalus_glaber_female
ENSPEMG00000021802	Fubp1	100	99.315	ENSHGLG00100003417	-	100	98.328	Heterocephalus_glaber_male
ENSPEMG00000021802	Fubp1	70	92.375	ENSHGLG00100001414	-	72	90.570	Heterocephalus_glaber_male
ENSPEMG00000021802	Fubp1	100	69.595	ENSHCOG00000000910	fubp1	70	75.536	Hippocampus_comes
ENSPEMG00000021802	Fubp1	100	78.231	ENSIPUG00000009896	fubp1	70	77.681	Ictalurus_punctatus
ENSPEMG00000021802	Fubp1	100	99.315	ENSSTOG00000014312	FUBP1	100	98.480	Ictidomys_tridecemlineatus
ENSPEMG00000021802	Fubp1	100	99.315	ENSJJAG00000020069	Fubp1	100	99.315	Jaculus_jaculus
ENSPEMG00000021802	Fubp1	100	70.270	ENSKMAG00000018897	fubp1	69	77.506	Kryptolebias_marmoratus
ENSPEMG00000021802	Fubp1	100	70.270	ENSLBEG00000012700	fubp1	72	75.957	Labrus_bergylta
ENSPEMG00000021802	Fubp1	96	81.560	ENSLOCG00000003745	fubp1	92	74.741	Lepisosteus_oculatus
ENSPEMG00000021802	Fubp1	100	99.315	ENSLAFG00000003273	FUBP1	99	98.014	Loxodonta_africana
ENSPEMG00000021802	Fubp1	100	99.315	ENSMFAG00000031825	FUBP1	100	97.720	Macaca_fascicularis
ENSPEMG00000021802	Fubp1	100	99.315	ENSMMUG00000002899	FUBP1	100	97.720	Macaca_mulatta
ENSPEMG00000021802	Fubp1	100	99.315	ENSMNEG00000045212	FUBP1	100	97.720	Macaca_nemestrina
ENSPEMG00000021802	Fubp1	100	70.270	ENSMZEG00005024298	fubp1	70	79.470	Maylandia_zebra
ENSPEMG00000021802	Fubp1	100	96.599	ENSMGAG00000009424	FUBP1	99	96.711	Meleagris_gallopavo
ENSPEMG00000021802	Fubp1	100	98.630	ENSMAUG00000016428	Fubp1	100	98.024	Mesocricetus_auratus
ENSPEMG00000021802	Fubp1	100	99.315	ENSMOCG00000014751	Fubp1	100	99.235	Microtus_ochrogaster
ENSPEMG00000021802	Fubp1	100	68.919	ENSMMOG00000019463	fubp1	64	82.817	Mola_mola
ENSPEMG00000021802	Fubp1	100	86.145	ENSMODG00000020804	FUBP1	100	90.297	Monodelphis_domestica
ENSPEMG00000021802	Fubp1	100	70.270	ENSMALG00000015173	fubp1	70	77.925	Monopterus_albus
ENSPEMG00000021802	Fubp1	100	99.315	MGP_CAROLIEiJ_G0025740	Fubp1	100	98.930	Mus_caroli
ENSPEMG00000021802	Fubp1	100	98.630	ENSMUSG00000028034	Fubp1	100	98.624	Mus_musculus
ENSPEMG00000021802	Fubp1	100	99.315	MGP_PahariEiJ_G0027191	Fubp1	100	99.084	Mus_pahari
ENSPEMG00000021802	Fubp1	100	99.315	MGP_SPRETEiJ_G0026693	Fubp1	100	98.777	Mus_spretus
ENSPEMG00000021802	Fubp1	100	97.945	ENSMLUG00000014802	FUBP1	99	94.030	Myotis_lucifugus
ENSPEMG00000021802	Fubp1	100	99.315	ENSNGAG00000014302	Fubp1	98	99.315	Nannospalax_galili
ENSPEMG00000021802	Fubp1	100	70.270	ENSNBRG00000015099	fubp1	72	78.842	Neolamprologus_brichardi
ENSPEMG00000021802	Fubp1	100	99.315	ENSNLEG00000009772	FUBP1	100	94.091	Nomascus_leucogenys
ENSPEMG00000021802	Fubp1	91	100.000	ENSMEUG00000007917	-	79	100.000	Notamacropus_eugenii
ENSPEMG00000021802	Fubp1	91	96.644	ENSOPRG00000001175	FUBP1	91	96.644	Ochotona_princeps
ENSPEMG00000021802	Fubp1	100	99.315	ENSODEG00000002600	-	100	99.315	Octodon_degus
ENSPEMG00000021802	Fubp1	100	68.493	ENSODEG00000003657	-	99	66.250	Octodon_degus
ENSPEMG00000021802	Fubp1	100	70.270	ENSONIG00000018381	fubp1	69	79.470	Oreochromis_niloticus
ENSPEMG00000021802	Fubp1	100	97.945	ENSOANG00000009777	FUBP1	99	91.941	Ornithorhynchus_anatinus
ENSPEMG00000021802	Fubp1	98	68.331	ENSORLG00000003540	fubp1	71	78.396	Oryzias_latipes
ENSPEMG00000021802	Fubp1	100	67.808	ENSORLG00020005908	fubp1	70	77.728	Oryzias_latipes_hni
ENSPEMG00000021802	Fubp1	98	70.983	ENSORLG00015008779	fubp1	70	77.728	Oryzias_latipes_hsok
ENSPEMG00000021802	Fubp1	98	68.006	ENSOMEG00000021943	fubp1	70	76.837	Oryzias_melastigma
ENSPEMG00000021802	Fubp1	100	99.315	ENSOGAG00000014233	FUBP1	99	94.337	Otolemur_garnettii
ENSPEMG00000021802	Fubp1	100	99.315	ENSOARG00000013259	FUBP1	99	94.595	Ovis_aries
ENSPEMG00000021802	Fubp1	100	99.315	ENSPPRG00000000413	FUBP1	100	98.024	Panthera_pardus
ENSPEMG00000021802	Fubp1	100	99.315	ENSPTIG00000019450	FUBP1	100	98.024	Panthera_tigris_altaica
ENSPEMG00000021802	Fubp1	100	97.279	ENSPSIG00000012965	FUBP1	99	96.303	Pelodiscus_sinensis
ENSPEMG00000021802	Fubp1	98	71.517	ENSPMGG00000009060	fubp1	71	77.582	Periophthalmus_magnuspinnatus
ENSPEMG00000021802	Fubp1	58	60.729	ENSPMAG00000001644	-	90	63.964	Petromyzon_marinus
ENSPEMG00000021802	Fubp1	100	70.270	ENSPLAG00000021170	fubp1	72	79.470	Poecilia_latipinna
ENSPEMG00000021802	Fubp1	98	72.784	ENSPMEG00000004747	fubp1	73	79.470	Poecilia_mexicana
ENSPEMG00000021802	Fubp1	100	70.270	ENSPREG00000017911	fubp1	70	79.470	Poecilia_reticulata
ENSPEMG00000021802	Fubp1	70	98.052	ENSPPYG00000001219	-	70	98.052	Pongo_abelii
ENSPEMG00000021802	Fubp1	100	99.315	ENSPCAG00000012617	FUBP1	100	97.717	Procavia_capensis
ENSPEMG00000021802	Fubp1	100	99.315	ENSPCOG00000024974	FUBP1	100	98.024	Propithecus_coquereli
ENSPEMG00000021802	Fubp1	100	93.617	ENSPVAG00000014637	FUBP1	100	93.617	Pteropus_vampyrus
ENSPEMG00000021802	Fubp1	100	70.270	ENSPNYG00000004552	fubp1	73	79.510	Pundamilia_nyererei
ENSPEMG00000021802	Fubp1	100	79.592	ENSPNAG00000016207	fubp1	87	77.851	Pygocentrus_nattereri
ENSPEMG00000021802	Fubp1	100	99.315	ENSRNOG00000043370	Fubp1	99	98.754	Rattus_norvegicus
ENSPEMG00000021802	Fubp1	100	99.315	ENSRBIG00000042950	FUBP1	99	97.833	Rhinopithecus_bieti
ENSPEMG00000021802	Fubp1	100	99.315	ENSRROG00000043534	FUBP1	99	97.833	Rhinopithecus_roxellana
ENSPEMG00000021802	Fubp1	100	99.315	ENSSBOG00000027299	FUBP1	100	97.720	Saimiri_boliviensis_boliviensis
ENSPEMG00000021802	Fubp1	100	97.945	ENSSHAG00000005367	FUBP1	100	96.945	Sarcophilus_harrisii
ENSPEMG00000021802	Fubp1	100	77.551	ENSSFOG00015010213	fubp1	70	79.823	Scleropages_formosus
ENSPEMG00000021802	Fubp1	100	70.270	ENSSDUG00000007383	fubp1	68	77.371	Seriola_dumerili
ENSPEMG00000021802	Fubp1	100	70.270	ENSSLDG00000022863	fubp1	72	77.827	Seriola_lalandi_dorsalis
ENSPEMG00000021802	Fubp1	100	94.982	ENSSARG00000011730	FUBP1	57	100.000	Sorex_araneus
ENSPEMG00000021802	Fubp1	98	88.421	ENSSPUG00000008389	FUBP1	99	85.819	Sphenodon_punctatus
ENSPEMG00000021802	Fubp1	100	70.270	ENSSPAG00000010161	fubp1	69	78.619	Stegastes_partitus
ENSPEMG00000021802	Fubp1	100	92.810	ENSTGUG00000006841	FUBP1	100	96.078	Taeniopygia_guttata
ENSPEMG00000021802	Fubp1	100	70.548	ENSTRUG00000004615	fubp1	65	78.808	Takifugu_rubripes
ENSPEMG00000021802	Fubp1	52	84.459	ENSTNIG00000019815	-	88	84.459	Tetraodon_nigroviridis
ENSPEMG00000021802	Fubp1	83	100.000	ENSTBEG00000017333	FUBP1	67	100.000	Tupaia_belangeri
ENSPEMG00000021802	Fubp1	100	99.315	ENSTTRG00000000096	FUBP1	100	97.872	Tursiops_truncatus
ENSPEMG00000021802	Fubp1	100	99.315	ENSVPAG00000004709	FUBP1	100	97.856	Vicugna_pacos
ENSPEMG00000021802	Fubp1	98	69.136	ENSXCOG00000019354	fubp1	72	77.925	Xiphophorus_couchianus
ENSPEMG00000021802	Fubp1	100	70.270	ENSXMAG00000007168	fubp1	73	79.249	Xiphophorus_maculatus