EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000022300 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 1301 bases
Position: chrKI616131.1:69947-71247
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000026079	RNA_pol_I_A49	PF06870.12	8.2e-63	1	2
ENSPEMP00000026079	RNA_pol_I_A49	PF06870.12	8.2e-63	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000030473	-	1182	-	ENSPEMP00000026079	393 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000022300's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000022300's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000022300	-	100	78.571	ENSPEMG00000019151	-	100	78.571

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000022300	-	96	64.762	ENSG00000137054	POLR1E	100	64.762	Homo_sapiens
ENSPEMG00000022300	-	94	36.340	ENSAPOG00000012452	polr1e	99	36.340	Acanthochromis_polyacanthus
ENSPEMG00000022300	-	97	58.723	ENSAMEG00000010193	POLR1E	98	58.723	Ailuropoda_melanoleuca
ENSPEMG00000022300	-	90	38.402	ENSACIG00000009884	polr1e	99	38.070	Amphilophus_citrinellus
ENSPEMG00000022300	-	94	37.379	ENSAOCG00000005665	polr1e	99	37.379	Amphiprion_ocellaris
ENSPEMG00000022300	-	94	37.864	ENSAPEG00000020581	polr1e	99	37.864	Amphiprion_percula
ENSPEMG00000022300	-	94	38.592	ENSATEG00000020609	polr1e	99	38.592	Anabas_testudineus
ENSPEMG00000022300	-	75	42.147	ENSAPLG00000010340	POLR1E	100	42.147	Anas_platyrhynchos
ENSPEMG00000022300	-	96	65.238	ENSANAG00000038046	POLR1E	100	65.238	Aotus_nancymaae
ENSPEMG00000022300	-	96	37.470	ENSACLG00000013685	polr1e	99	37.470	Astatotilapia_calliptera
ENSPEMG00000022300	-	93	34.699	ENSAMXG00000018181	polr1e	98	34.699	Astyanax_mexicanus
ENSPEMG00000022300	-	96	65.952	ENSBTAG00000012243	POLR1E	100	65.952	Bos_taurus
ENSPEMG00000022300	-	90	59.241	ENSCJAG00000010512	POLR1E	93	63.200	Callithrix_jacchus
ENSPEMG00000022300	-	96	66.429	ENSCAFG00000002377	POLR1E	100	66.429	Canis_familiaris
ENSPEMG00000022300	-	96	66.190	ENSCAFG00020017851	POLR1E	100	66.190	Canis_lupus_dingo
ENSPEMG00000022300	-	96	64.048	ENSCHIG00000019479	POLR1E	100	64.048	Capra_hircus
ENSPEMG00000022300	-	96	64.524	ENSTSYG00000002075	POLR1E	100	64.524	Carlito_syrichta
ENSPEMG00000022300	-	64	66.084	ENSCAPG00000015653	POLR1E	99	66.084	Cavia_aperea
ENSPEMG00000022300	-	96	68.258	ENSCPOG00000009965	POLR1E	100	68.258	Cavia_porcellus
ENSPEMG00000022300	-	96	60.341	ENSCCAG00000029460	POLR1E	100	60.341	Cebus_capucinus
ENSPEMG00000022300	-	96	65.476	ENSCATG00000031732	POLR1E	100	65.476	Cercocebus_atys
ENSPEMG00000022300	-	85	66.133	ENSCLAG00000012701	POLR1E	98	66.133	Chinchilla_lanigera
ENSPEMG00000022300	-	96	65.714	ENSCSAG00000010782	POLR1E	100	65.714	Chlorocebus_sabaeus
ENSPEMG00000022300	-	90	57.468	ENSCHOG00000013024	POLR1E	83	57.468	Choloepus_hoffmanni
ENSPEMG00000022300	-	94	55.231	ENSCPBG00000006923	POLR1E	99	55.231	Chrysemys_picta_bellii
ENSPEMG00000022300	-	96	64.524	ENSCANG00000036112	POLR1E	100	64.524	Colobus_angolensis_palliatus
ENSPEMG00000022300	-	100	76.322	ENSCGRG00001006197	Polr1e	100	76.322	Cricetulus_griseus_chok1gshd
ENSPEMG00000022300	-	100	76.092	ENSCGRG00000006430	Polr1e	100	76.092	Cricetulus_griseus_crigri
ENSPEMG00000022300	-	93	35.714	ENSCSEG00000005121	polr1e	99	35.714	Cynoglossus_semilaevis
ENSPEMG00000022300	-	94	35.280	ENSCVAG00000019759	polr1e	99	35.280	Cyprinodon_variegatus
ENSPEMG00000022300	-	90	36.203	ENSDARG00000006434	polr1e	99	36.010	Danio_rerio
ENSPEMG00000022300	-	96	57.356	ENSDNOG00000010257	POLR1E	99	57.356	Dasypus_novemcinctus
ENSPEMG00000022300	-	81	60.615	ENSETEG00000018204	POLR1E	99	60.615	Echinops_telfairi
ENSPEMG00000022300	-	96	65.238	ENSEASG00005000675	POLR1E	100	65.238	Equus_asinus_asinus
ENSPEMG00000022300	-	96	65.238	ENSECAG00000014669	POLR1E	100	65.238	Equus_caballus
ENSPEMG00000022300	-	90	55.696	ENSEEUG00000011928	POLR1E	83	55.612	Erinaceus_europaeus
ENSPEMG00000022300	-	93	38.272	ENSELUG00000008150	polr1e	97	38.272	Esox_lucius
ENSPEMG00000022300	-	96	64.524	ENSFCAG00000013081	POLR1E	100	64.524	Felis_catus
ENSPEMG00000022300	-	90	47.208	ENSFALG00000012950	POLR1E	99	47.208	Ficedula_albicollis
ENSPEMG00000022300	-	96	67.780	ENSFDAG00000016917	POLR1E	100	67.780	Fukomys_damarensis
ENSPEMG00000022300	-	94	36.473	ENSFHEG00000009801	polr1e	99	36.473	Fundulus_heteroclitus
ENSPEMG00000022300	-	93	34.406	ENSGMOG00000003336	POLR1E	97	34.739	Gadus_morhua
ENSPEMG00000022300	-	94	47.330	ENSGALG00000005395	POLR1E	99	47.330	Gallus_gallus
ENSPEMG00000022300	-	94	35.280	ENSGAFG00000004850	polr1e	99	35.280	Gambusia_affinis
ENSPEMG00000022300	-	94	33.732	ENSGACG00000016087	polr1e	99	33.732	Gasterosteus_aculeatus
ENSPEMG00000022300	-	94	50.754	ENSGAGG00000001659	POLR1E	99	51.482	Gopherus_agassizii
ENSPEMG00000022300	-	96	64.524	ENSGGOG00000001882	POLR1E	100	73.554	Gorilla_gorilla
ENSPEMG00000022300	-	96	37.470	ENSHBUG00000002559	polr1e	99	37.470	Haplochromis_burtoni
ENSPEMG00000022300	-	96	68.182	ENSHGLG00000002036	POLR1E	100	68.182	Heterocephalus_glaber_female
ENSPEMG00000022300	-	96	68.421	ENSHGLG00100012784	POLR1E	100	68.421	Heterocephalus_glaber_male
ENSPEMG00000022300	-	94	37.317	ENSHCOG00000002774	polr1e	99	37.317	Hippocampus_comes
ENSPEMG00000022300	-	93	36.275	ENSIPUG00000003019	polr1e	98	36.275	Ictalurus_punctatus
ENSPEMG00000022300	-	96	66.587	ENSSTOG00000009810	POLR1E	100	66.587	Ictidomys_tridecemlineatus
ENSPEMG00000022300	-	100	67.356	ENSJJAG00000020731	Polr1e	100	67.356	Jaculus_jaculus
ENSPEMG00000022300	-	94	36.165	ENSKMAG00000000046	polr1e	99	36.165	Kryptolebias_marmoratus
ENSPEMG00000022300	-	96	36.779	ENSLBEG00000003104	polr1e	99	36.779	Labrus_bergylta
ENSPEMG00000022300	-	81	50.829	ENSLACG00000003416	POLR1E	100	51.381	Latimeria_chalumnae
ENSPEMG00000022300	-	96	41.866	ENSLOCG00000012859	polr1e	99	41.866	Lepisosteus_oculatus
ENSPEMG00000022300	-	96	76.522	ENSLAFG00000012831	POLR1E	99	65.558	Loxodonta_africana
ENSPEMG00000022300	-	99	65.349	ENSMFAG00000045465	POLR1E	100	57.743	Macaca_fascicularis
ENSPEMG00000022300	-	96	65.476	ENSMMUG00000017892	POLR1E	100	65.476	Macaca_mulatta
ENSPEMG00000022300	-	96	60.698	ENSMNEG00000040283	POLR1E	100	60.698	Macaca_nemestrina
ENSPEMG00000022300	-	96	65.476	ENSMLEG00000031135	POLR1E	100	65.476	Mandrillus_leucophaeus
ENSPEMG00000022300	-	96	37.470	ENSMAMG00000001260	polr1e	99	37.470	Mastacembelus_armatus
ENSPEMG00000022300	-	96	37.709	ENSMZEG00005021536	polr1e	99	37.709	Maylandia_zebra
ENSPEMG00000022300	-	100	74.943	ENSMAUG00000021044	Polr1e	100	74.943	Mesocricetus_auratus
ENSPEMG00000022300	-	96	64.762	ENSMICG00000003673	POLR1E	100	64.762	Microcebus_murinus
ENSPEMG00000022300	-	100	74.713	ENSMOCG00000012920	Polr1e	100	74.713	Microtus_ochrogaster
ENSPEMG00000022300	-	94	37.198	ENSMMOG00000007391	polr1e	99	37.198	Mola_mola
ENSPEMG00000022300	-	92	55.941	ENSMODG00000002884	POLR1E	99	55.941	Monodelphis_domestica
ENSPEMG00000022300	-	96	35.934	ENSMALG00000002665	polr1e	99	35.934	Monopterus_albus
ENSPEMG00000022300	-	100	70.276	MGP_CAROLIEiJ_G0025967	Polr1e	100	70.276	Mus_caroli
ENSPEMG00000022300	-	99	79.070	ENSMUSG00000028318	Polr1e	100	71.034	Mus_musculus
ENSPEMG00000022300	-	99	79.845	MGP_PahariEiJ_G0024114	Polr1e	95	79.845	Mus_pahari
ENSPEMG00000022300	-	99	79.845	MGP_SPRETEiJ_G0026930	Polr1e	100	71.264	Mus_spretus
ENSPEMG00000022300	-	96	55.626	ENSMPUG00000006040	POLR1E	99	55.626	Mustela_putorius_furo
ENSPEMG00000022300	-	96	64.048	ENSMLUG00000012688	POLR1E	97	64.048	Myotis_lucifugus
ENSPEMG00000022300	-	100	68.046	ENSNGAG00000002520	Polr1e	100	68.046	Nannospalax_galili
ENSPEMG00000022300	-	94	37.864	ENSNBRG00000016822	polr1e	98	37.864	Neolamprologus_brichardi
ENSPEMG00000022300	-	96	64.286	ENSNLEG00000003616	POLR1E	100	64.286	Nomascus_leucogenys
ENSPEMG00000022300	-	65	73.750	ENSMEUG00000015372	-	72	73.750	Notamacropus_eugenii
ENSPEMG00000022300	-	81	54.444	ENSOPRG00000014206	POLR1E	100	54.444	Ochotona_princeps
ENSPEMG00000022300	-	99	66.744	ENSODEG00000014565	POLR1E	99	66.744	Octodon_degus
ENSPEMG00000022300	-	96	37.470	ENSONIG00000008921	polr1e	99	37.470	Oreochromis_niloticus
ENSPEMG00000022300	-	96	64.762	ENSOCUG00000024773	POLR1E	100	64.762	Oryctolagus_cuniculus
ENSPEMG00000022300	-	94	37.198	ENSORLG00000005143	polr1e	99	37.198	Oryzias_latipes
ENSPEMG00000022300	-	89	37.260	ENSORLG00020007271	polr1e	99	38.158	Oryzias_latipes_hni
ENSPEMG00000022300	-	94	37.440	ENSORLG00015000137	polr1e	99	37.440	Oryzias_latipes_hsok
ENSPEMG00000022300	-	94	37.136	ENSOMEG00000013264	polr1e	97	37.136	Oryzias_melastigma
ENSPEMG00000022300	-	98	65.574	ENSOGAG00000012981	POLR1E	99	65.574	Otolemur_garnettii
ENSPEMG00000022300	-	98	64.019	ENSOARG00000011465	POLR1E	98	64.019	Ovis_aries
ENSPEMG00000022300	-	96	64.524	ENSPPAG00000034566	POLR1E	100	64.524	Pan_paniscus
ENSPEMG00000022300	-	96	64.524	ENSPPRG00000005649	POLR1E	100	64.524	Panthera_pardus
ENSPEMG00000022300	-	96	64.524	ENSPTIG00000009774	POLR1E	100	64.524	Panthera_tigris_altaica
ENSPEMG00000022300	-	96	64.524	ENSPTRG00000020944	POLR1E	100	64.524	Pan_troglodytes
ENSPEMG00000022300	-	96	65.476	ENSPANG00000025563	POLR1E	100	65.476	Papio_anubis
ENSPEMG00000022300	-	94	37.410	ENSPKIG00000003562	polr1e	99	36.930	Paramormyrops_kingsleyae
ENSPEMG00000022300	-	91	49.873	ENSPSIG00000003274	POLR1E	92	50.633	Pelodiscus_sinensis
ENSPEMG00000022300	-	90	39.221	ENSPMGG00000024169	polr1e	96	39.221	Periophthalmus_magnuspinnatus
ENSPEMG00000022300	-	93	56.543	ENSPCIG00000014798	POLR1E	99	56.543	Phascolarctos_cinereus
ENSPEMG00000022300	-	95	34.842	ENSPFOG00000019627	polr1e	99	34.842	Poecilia_formosa
ENSPEMG00000022300	-	94	36.983	ENSPLAG00000022679	polr1e	99	36.983	Poecilia_latipinna
ENSPEMG00000022300	-	80	36.695	ENSPMEG00000022123	polr1e	93	36.695	Poecilia_mexicana
ENSPEMG00000022300	-	94	35.766	ENSPREG00000009470	polr1e	99	35.766	Poecilia_reticulata
ENSPEMG00000022300	-	96	64.524	ENSPPYG00000019061	POLR1E	100	64.524	Pongo_abelii
ENSPEMG00000022300	-	53	62.288	ENSPCAG00000004891	POLR1E	77	62.288	Procavia_capensis
ENSPEMG00000022300	-	96	64.762	ENSPCOG00000027448	POLR1E	100	64.762	Propithecus_coquereli
ENSPEMG00000022300	-	90	66.076	ENSPVAG00000007940	POLR1E	83	66.329	Pteropus_vampyrus
ENSPEMG00000022300	-	96	37.470	ENSPNYG00000001032	polr1e	99	37.470	Pundamilia_nyererei
ENSPEMG00000022300	-	90	36.294	ENSPNAG00000006987	polr1e	95	36.294	Pygocentrus_nattereri
ENSPEMG00000022300	-	100	74.023	ENSRNOG00000012664	Polr1e	100	74.023	Rattus_norvegicus
ENSPEMG00000022300	-	93	64.039	ENSRBIG00000034214	POLR1E	100	64.136	Rhinopithecus_bieti
ENSPEMG00000022300	-	96	65.000	ENSRROG00000031986	POLR1E	100	65.000	Rhinopithecus_roxellana
ENSPEMG00000022300	-	94	64.806	ENSSBOG00000021415	POLR1E	98	64.806	Saimiri_boliviensis_boliviensis
ENSPEMG00000022300	-	80	54.494	ENSSHAG00000016084	POLR1E	99	54.494	Sarcophilus_harrisii
ENSPEMG00000022300	-	93	37.897	ENSSFOG00015002293	polr1e	98	37.897	Scleropages_formosus
ENSPEMG00000022300	-	96	38.756	ENSSMAG00000011672	polr1e	94	38.756	Scophthalmus_maximus
ENSPEMG00000022300	-	96	37.470	ENSSDUG00000022279	polr1e	99	37.470	Seriola_dumerili
ENSPEMG00000022300	-	96	36.993	ENSSLDG00000024918	polr1e	99	36.993	Seriola_lalandi_dorsalis
ENSPEMG00000022300	-	51	55.603	ENSSARG00000009810	-	58	55.603	Sorex_araneus
ENSPEMG00000022300	-	94	52.542	ENSSPUG00000009499	POLR1E	99	52.542	Sphenodon_punctatus
ENSPEMG00000022300	-	94	38.443	ENSSPAG00000021240	polr1e	99	38.443	Stegastes_partitus
ENSPEMG00000022300	-	96	65.952	ENSSSCG00000005347	POLR1E	100	65.952	Sus_scrofa
ENSPEMG00000022300	-	88	48.889	ENSTGUG00000007169	POLR1E	85	48.889	Taeniopygia_guttata
ENSPEMG00000022300	-	94	35.990	ENSTRUG00000020779	polr1e	99	35.990	Takifugu_rubripes
ENSPEMG00000022300	-	94	36.562	ENSTNIG00000017812	polr1e	99	36.562	Tetraodon_nigroviridis
ENSPEMG00000022300	-	90	66.835	ENSTBEG00000013786	POLR1E	84	66.835	Tupaia_belangeri
ENSPEMG00000022300	-	90	65.327	ENSTTRG00000008294	POLR1E	84	65.327	Tursiops_truncatus
ENSPEMG00000022300	-	96	66.429	ENSUAMG00000012474	POLR1E	100	66.429	Ursus_americanus
ENSPEMG00000022300	-	96	66.429	ENSUMAG00000011496	POLR1E	100	66.429	Ursus_maritimus
ENSPEMG00000022300	-	77	59.064	ENSVPAG00000009048	POLR1E	81	59.064	Vicugna_pacos
ENSPEMG00000022300	-	96	66.190	ENSVVUG00000019954	POLR1E	100	66.190	Vulpes_vulpes
ENSPEMG00000022300	-	94	40.964	ENSXETG00000006533	polr1e	99	40.964	Xenopus_tropicalis
ENSPEMG00000022300	-	94	36.935	ENSXCOG00000013706	polr1e	99	36.935	Xiphophorus_couchianus
ENSPEMG00000022300	-	94	36.740	ENSXMAG00000012484	polr1e	99	36.740	Xiphophorus_maculatus