EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000022358 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ATRX%2C chromatin remodeler
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 133477 bases
Position: chrKI615920.1:512800-646276
Accession: 102928072
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000026163	ResIII	PF04851.15	6.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000030557	-	6838	XM_006992600	ENSPEMP00000026163	1023 (aa)	XP_006992662	-

Gene Model

Click here to download ENSPEMG00000022358's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000022358's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000022358	-	51	32.911	ENSPEMG00000021081	-	52	32.645
ENSPEMG00000022358	-	50	33.784	ENSPEMG00000012133	Rad54b	54	33.632
ENSPEMG00000022358	-	54	39.901	ENSPEMG00000011422	Rad54l	68	39.409

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000022358	-	97	92.369	ENSCANG00000031935	ATRX	99	91.767	Colobus_angolensis_palliatus
ENSPEMG00000022358	-	79	47.117	FBgn0039338	XNP	69	47.878	Drosophila_melanogaster
ENSPEMG00000022358	-	97	96.084	ENSGGOG00000024999	ATRX	99	96.084	Gorilla_gorilla
ENSPEMG00000022358	-	97	95.884	ENSMFAG00000031719	ATRX	99	95.884	Macaca_fascicularis
ENSPEMG00000022358	-	97	95.884	ENSMNEG00000033171	ATRX	99	95.884	Macaca_nemestrina
ENSPEMG00000022358	-	97	95.984	ENSMLEG00000036012	ATRX	99	95.984	Mandrillus_leucophaeus
ENSPEMG00000022358	-	98	54.509	ENSNBRG00000016297	-	50	67.683	Neolamprologus_brichardi
ENSPEMG00000022358	-	97	96.185	ENSNLEG00000001144	ATRX	99	96.185	Nomascus_leucogenys
ENSPEMG00000022358	-	98	95.405	ENSPPAG00000043806	ATRX	100	95.005	Pan_paniscus
ENSPEMG00000022358	-	98	95.504	ENSPTRG00000022047	ATRX	100	95.105	Pan_troglodytes
ENSPEMG00000022358	-	97	95.884	ENSPANG00000024984	ATRX	99	95.884	Papio_anubis
ENSPEMG00000022358	-	98	57.017	ENSSPAG00000009858	-	51	55.752	Stegastes_partitus