EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000022852 (Gene tree)
Gene ID: 102914870
Gene Symbol: Hfm1
Alias: -
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 85288 bases
Position: chrKI615590.1:2014686-2099973
Accession: 102914870
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000026892	ResIII	PF04851.15	3.9e-11	1	1
ENSPEMP00000026892	DEAD	PF00270.29	3.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000031295	-	4308	XM_016004370	ENSPEMP00000026892	1435 (aa)	XP_015859856	-

Gene Model

Click here to download ENSPEMG00000022852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000022852's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000022852	Hfm1	51	35.758	ENSPEMG00000015319	Ascc3	61	35.758

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000022852	Hfm1	100	80.320	ENSG00000162669	HFM1	100	80.320	Homo_sapiens
ENSPEMG00000022852	Hfm1	58	64.790	ENSAPOG00000005304	hfm1	94	64.790	Acanthochromis_polyacanthus
ENSPEMG00000022852	Hfm1	100	78.179	ENSAMEG00000000432	HFM1	100	78.179	Ailuropoda_melanoleuca
ENSPEMG00000022852	Hfm1	70	59.029	ENSACIG00000021553	hfm1	91	59.029	Amphilophus_citrinellus
ENSPEMG00000022852	Hfm1	58	64.946	ENSAOCG00000022839	hfm1	96	67.172	Amphiprion_ocellaris
ENSPEMG00000022852	Hfm1	58	64.826	ENSAPEG00000014316	hfm1	96	67.468	Amphiprion_percula
ENSPEMG00000022852	Hfm1	70	60.665	ENSATEG00000019181	hfm1	84	59.649	Anabas_testudineus
ENSPEMG00000022852	Hfm1	100	59.247	ENSAPLG00000013639	HFM1	100	59.247	Anas_platyrhynchos
ENSPEMG00000022852	Hfm1	100	77.361	ENSANAG00000029513	HFM1	100	77.361	Aotus_nancymaae
ENSPEMG00000022852	Hfm1	65	61.976	ENSACLG00000009033	hfm1	97	63.962	Astatotilapia_calliptera
ENSPEMG00000022852	Hfm1	73	60.485	ENSAMXG00000006108	hfm1	73	60.485	Astyanax_mexicanus
ENSPEMG00000022852	Hfm1	100	77.500	ENSBTAG00000020856	HFM1	100	77.500	Bos_taurus
ENSPEMG00000022852	Hfm1	100	78.373	ENSCJAG00000001843	HFM1	100	78.373	Callithrix_jacchus
ENSPEMG00000022852	Hfm1	100	77.623	ENSCAFG00000020187	HFM1	100	77.623	Canis_familiaris
ENSPEMG00000022852	Hfm1	100	78.194	ENSTSYG00000014250	HFM1	100	78.194	Carlito_syrichta
ENSPEMG00000022852	Hfm1	99	74.774	ENSCPOG00000007421	HFM1	99	74.774	Cavia_porcellus
ENSPEMG00000022852	Hfm1	100	78.303	ENSCCAG00000033206	HFM1	100	78.303	Cebus_capucinus
ENSPEMG00000022852	Hfm1	100	79.624	ENSCATG00000030987	HFM1	100	79.624	Cercocebus_atys
ENSPEMG00000022852	Hfm1	100	75.541	ENSCLAG00000005173	HFM1	99	75.541	Chinchilla_lanigera
ENSPEMG00000022852	Hfm1	68	86.842	ENSCHOG00000011824	-	77	86.842	Choloepus_hoffmanni
ENSPEMG00000022852	Hfm1	100	85.576	ENSCGRG00001016995	Hfm1	100	85.576	Cricetulus_griseus_chok1gshd
ENSPEMG00000022852	Hfm1	100	90.111	ENSCGRG00000017181	Hfm1	100	90.111	Cricetulus_griseus_crigri
ENSPEMG00000022852	Hfm1	71	57.541	ENSCSEG00000017659	hfm1	94	57.784	Cynoglossus_semilaevis
ENSPEMG00000022852	Hfm1	50	66.994	ENSCVAG00000005075	hfm1	86	66.994	Cyprinodon_variegatus
ENSPEMG00000022852	Hfm1	76	54.083	ENSDARG00000104288	hfm1	96	54.083	Danio_rerio
ENSPEMG00000022852	Hfm1	100	74.057	ENSDNOG00000004776	HFM1	100	74.057	Dasypus_novemcinctus
ENSPEMG00000022852	Hfm1	100	75.516	ENSDORG00000014661	Hfm1	100	75.516	Dipodomys_ordii
ENSPEMG00000022852	Hfm1	70	82.069	ENSEASG00005015424	HFM1	97	82.069	Equus_asinus_asinus
ENSPEMG00000022852	Hfm1	100	77.172	ENSECAG00000024039	HFM1	100	77.172	Equus_caballus
ENSPEMG00000022852	Hfm1	63	65.639	ENSELUG00000018944	hfm1	97	65.639	Esox_lucius
ENSPEMG00000022852	Hfm1	100	78.681	ENSFCAG00000029116	HFM1	100	78.681	Felis_catus
ENSPEMG00000022852	Hfm1	100	58.056	ENSFALG00000001781	HFM1	100	58.124	Ficedula_albicollis
ENSPEMG00000022852	Hfm1	100	74.580	ENSFDAG00000020816	HFM1	100	74.580	Fukomys_damarensis
ENSPEMG00000022852	Hfm1	66	59.352	ENSGMOG00000017436	hfm1	99	59.352	Gadus_morhua
ENSPEMG00000022852	Hfm1	71	59.556	ENSGAFG00000018093	hfm1	94	64.277	Gambusia_affinis
ENSPEMG00000022852	Hfm1	66	60.852	ENSGACG00000015686	hfm1	100	60.852	Gasterosteus_aculeatus
ENSPEMG00000022852	Hfm1	100	79.972	ENSGGOG00000038524	HFM1	100	79.972	Gorilla_gorilla
ENSPEMG00000022852	Hfm1	65	63.158	ENSHBUG00000007309	hfm1	95	59.436	Haplochromis_burtoni
ENSPEMG00000022852	Hfm1	57	62.822	ENSHCOG00000019632	hfm1	97	62.822	Hippocampus_comes
ENSPEMG00000022852	Hfm1	70	60.964	ENSIPUG00000017020	hfm1	92	64.958	Ictalurus_punctatus
ENSPEMG00000022852	Hfm1	100	77.855	ENSJJAG00000017198	Hfm1	100	77.855	Jaculus_jaculus
ENSPEMG00000022852	Hfm1	62	61.615	ENSKMAG00000002282	hfm1	91	61.615	Kryptolebias_marmoratus
ENSPEMG00000022852	Hfm1	71	58.096	ENSLBEG00000006759	hfm1	96	63.962	Labrus_bergylta
ENSPEMG00000022852	Hfm1	66	67.562	ENSLACG00000010698	HFM1	100	64.245	Latimeria_chalumnae
ENSPEMG00000022852	Hfm1	72	62.917	ENSLOCG00000004931	hfm1	97	62.822	Lepisosteus_oculatus
ENSPEMG00000022852	Hfm1	52	85.330	ENSLAFG00000015903	-	99	85.330	Loxodonta_africana
ENSPEMG00000022852	Hfm1	100	77.008	ENSMFAG00000003649	HFM1	100	77.008	Macaca_fascicularis
ENSPEMG00000022852	Hfm1	100	79.416	ENSMMUG00000006819	HFM1	100	79.416	Macaca_mulatta
ENSPEMG00000022852	Hfm1	55	67.503	ENSMAMG00000004623	hfm1	97	64.933	Mastacembelus_armatus
ENSPEMG00000022852	Hfm1	65	62.084	ENSMZEG00005004679	hfm1	97	64.081	Maylandia_zebra
ENSPEMG00000022852	Hfm1	54	77.073	ENSMGAG00000008437	HFM1	96	77.073	Meleagris_gallopavo
ENSPEMG00000022852	Hfm1	100	90.536	ENSMAUG00000018858	Hfm1	100	90.536	Mesocricetus_auratus
ENSPEMG00000022852	Hfm1	100	79.291	ENSMICG00000037935	HFM1	100	79.291	Microcebus_murinus
ENSPEMG00000022852	Hfm1	100	87.317	ENSMOCG00000014812	Hfm1	100	87.317	Microtus_ochrogaster
ENSPEMG00000022852	Hfm1	62	62.290	ENSMMOG00000006148	hfm1	96	63.066	Mola_mola
ENSPEMG00000022852	Hfm1	65	62.379	ENSMALG00000002401	hfm1	96	63.477	Monopterus_albus
ENSPEMG00000022852	Hfm1	95	81.606	MGP_CAROLIEiJ_G0027496	Hfm1	100	81.606	Mus_caroli
ENSPEMG00000022852	Hfm1	100	86.829	ENSMUSG00000043410	Hfm1	100	86.829	Mus_musculus
ENSPEMG00000022852	Hfm1	100	86.481	MGP_PahariEiJ_G0017268	Hfm1	100	86.481	Mus_pahari
ENSPEMG00000022852	Hfm1	100	86.620	MGP_SPRETEiJ_G0028495	Hfm1	100	86.620	Mus_spretus
ENSPEMG00000022852	Hfm1	100	74.949	ENSMPUG00000004594	HFM1	100	74.949	Mustela_putorius_furo
ENSPEMG00000022852	Hfm1	100	76.283	ENSMLUG00000010200	HFM1	100	76.283	Myotis_lucifugus
ENSPEMG00000022852	Hfm1	70	56.219	ENSNBRG00000002910	hfm1	97	64.078	Neolamprologus_brichardi
ENSPEMG00000022852	Hfm1	100	76.577	ENSNLEG00000010285	HFM1	100	76.577	Nomascus_leucogenys
ENSPEMG00000022852	Hfm1	84	66.379	ENSMEUG00000015788	HFM1	84	66.379	Notamacropus_eugenii
ENSPEMG00000022852	Hfm1	84	74.534	ENSOPRG00000013916	HFM1	84	74.534	Ochotona_princeps
ENSPEMG00000022852	Hfm1	71	60.794	ENSONIG00000010590	hfm1	99	60.670	Oreochromis_niloticus
ENSPEMG00000022852	Hfm1	57	64.039	ENSORLG00000026844	hfm1	99	64.039	Oryzias_latipes
ENSPEMG00000022852	Hfm1	68	54.914	ENSORLG00020002951	hfm1	77	54.848	Oryzias_latipes_hni
ENSPEMG00000022852	Hfm1	72	57.248	ENSOMEG00000016474	hfm1	90	49.815	Oryzias_melastigma
ENSPEMG00000022852	Hfm1	85	80.472	ENSOGAG00000032369	HFM1	100	80.472	Otolemur_garnettii
ENSPEMG00000022852	Hfm1	100	78.001	ENSOARG00000015812	HFM1	100	78.001	Ovis_aries
ENSPEMG00000022852	Hfm1	92	81.989	ENSPPAG00000024582	HFM1	100	81.989	Pan_paniscus
ENSPEMG00000022852	Hfm1	100	78.681	ENSPPRG00000003270	HFM1	100	78.681	Panthera_pardus
ENSPEMG00000022852	Hfm1	100	78.611	ENSPTIG00000018881	HFM1	100	78.611	Panthera_tigris_altaica
ENSPEMG00000022852	Hfm1	100	80.111	ENSPTRG00000000948	HFM1	100	80.111	Pan_troglodytes
ENSPEMG00000022852	Hfm1	100	79.624	ENSPANG00000009838	HFM1	100	79.624	Papio_anubis
ENSPEMG00000022852	Hfm1	62	65.354	ENSPKIG00000003810	hfm1	95	65.981	Paramormyrops_kingsleyae
ENSPEMG00000022852	Hfm1	57	64.770	ENSPMGG00000011059	hfm1	100	64.770	Periophthalmus_magnuspinnatus
ENSPEMG00000022852	Hfm1	100	64.362	ENSPCIG00000014233	HFM1	100	64.362	Phascolarctos_cinereus
ENSPEMG00000022852	Hfm1	70	59.848	ENSPFOG00000017194	hfm1	99	60.228	Poecilia_formosa
ENSPEMG00000022852	Hfm1	71	61.344	ENSPLAG00000000571	hfm1	92	61.344	Poecilia_latipinna
ENSPEMG00000022852	Hfm1	71	61.568	ENSPMEG00000019475	hfm1	92	61.568	Poecilia_mexicana
ENSPEMG00000022852	Hfm1	70	60.865	ENSPREG00000007803	hfm1	94	63.636	Poecilia_reticulata
ENSPEMG00000022852	Hfm1	100	79.764	ENSPPYG00000001163	HFM1	100	79.764	Pongo_abelii
ENSPEMG00000022852	Hfm1	70	76.682	ENSPCAG00000004289	-	70	76.682	Procavia_capensis
ENSPEMG00000022852	Hfm1	100	70.208	ENSPVAG00000009713	HFM1	100	70.208	Pteropus_vampyrus
ENSPEMG00000022852	Hfm1	65	61.976	ENSPNYG00000001795	hfm1	97	64.081	Pundamilia_nyererei
ENSPEMG00000022852	Hfm1	58	66.390	ENSPNAG00000010865	hfm1	83	66.390	Pygocentrus_nattereri
ENSPEMG00000022852	Hfm1	100	85.157	ENSRNOG00000023299	Hfm1	100	85.157	Rattus_norvegicus
ENSPEMG00000022852	Hfm1	100	79.833	ENSRROG00000045569	HFM1	100	79.833	Rhinopithecus_roxellana
ENSPEMG00000022852	Hfm1	100	76.356	ENSSBOG00000027456	HFM1	100	76.356	Saimiri_boliviensis_boliviensis
ENSPEMG00000022852	Hfm1	60	67.708	ENSSHAG00000014616	-	98	67.708	Sarcophilus_harrisii
ENSPEMG00000022852	Hfm1	85	54.805	ENSSFOG00015020129	hfm1	100	48.260	Scleropages_formosus
ENSPEMG00000022852	Hfm1	62	64.358	ENSSMAG00000006907	hfm1	87	64.358	Scophthalmus_maximus
ENSPEMG00000022852	Hfm1	57	65.617	ENSSDUG00000011424	hfm1	93	65.617	Seriola_dumerili
ENSPEMG00000022852	Hfm1	58	65.862	ENSSLDG00000016386	hfm1	92	65.862	Seriola_lalandi_dorsalis
ENSPEMG00000022852	Hfm1	69	57.619	ENSSPAG00000001023	hfm1	94	65.426	Stegastes_partitus
ENSPEMG00000022852	Hfm1	100	75.017	ENSSSCG00000006912	HFM1	98	77.239	Sus_scrofa
ENSPEMG00000022852	Hfm1	66	74.713	ENSTGUG00000006172	HFM1	100	74.713	Taeniopygia_guttata
ENSPEMG00000022852	Hfm1	100	75.382	ENSTTRG00000013933	HFM1	100	75.382	Tursiops_truncatus
ENSPEMG00000022852	Hfm1	93	79.059	ENSVPAG00000011331	HFM1	93	79.059	Vicugna_pacos
ENSPEMG00000022852	Hfm1	71	79.167	ENSVVUG00000020760	HFM1	99	79.167	Vulpes_vulpes
ENSPEMG00000022852	Hfm1	57	65.254	ENSXMAG00000004178	hfm1	92	65.254	Xiphophorus_maculatus