EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPEMG00000023569 (Gene tree)
Gene ID
102908392
Gene Symbol
-
Alias
-
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Peromyscus_maniculatus_bairdii
Status
putative
Strand
Minus strand
Length
17580 bases
Position
chrKI615897.1:406009-423588
Accession
102908392
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPEMP00000027892PABPPF00658.181.6e-3111
ENSPEMP00000027891PABPPF00658.181.8e-3111
ENSPEMP00000027892RRM_5PF13893.61.4e-0912
ENSPEMP00000027892RRM_5PF13893.61.4e-0922
ENSPEMP00000027891RRM_5PF13893.61.7e-0912
ENSPEMP00000027891RRM_5PF13893.61.7e-0922
ENSPEMP00000027892RRM_1PF00076.221.1e-9114
ENSPEMP00000027892RRM_1PF00076.221.1e-9124
ENSPEMP00000027892RRM_1PF00076.221.1e-9134
ENSPEMP00000027892RRM_1PF00076.221.1e-9144
ENSPEMP00000027891RRM_1PF00076.221.4e-9114
ENSPEMP00000027891RRM_1PF00076.221.4e-9124
ENSPEMP00000027891RRM_1PF00076.221.4e-9134
ENSPEMP00000027891RRM_1PF00076.221.4e-9144
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPEMT00000032308-1986XM_006992245ENSPEMP00000027891661 (aa)XP_006992307UPI00042AD740
ENSPEMT00000032309-1899-ENSPEMP00000027892632 (aa)--
Gene Model
Click here to download ENSPEMG00000023569's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000023569's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPEMG00000023569-9760.000ENSPEMG00000020671Pabpc1l9860.390
ENSPEMG00000023569-6067.935ENSPEMG00000012565Pabpc4l9968.493
ENSPEMG00000023569-5730.189ENSPEMG00000001090Tia18530.189
ENSPEMG00000023569-9970.801ENSPEMG00000013149Pabpc29970.394
ENSPEMG00000023569-10068.567ENSPEMG00000011901Pabpc610068.567
ENSPEMG00000023569-5930.952ENSPEMG00000021782Elavl49030.625
ENSPEMG00000023569-5934.940ENSPEMG00000014101Elavl28634.940
ENSPEMG00000023569-5866.573ENSPEMG00000000171Pabpc59566.391
ENSPEMG00000023569-5837.500ENSPEMG00000017244Celf25637.500
ENSPEMG00000023569-5431.646ENSPEMG00000020274Hnrnpa06032.667
ENSPEMG00000023569-9878.515ENSPEMG00000014998Pabpc19878.323
ENSPEMG00000023569-5833.553ENSPEMG00000022021Elavl19533.553
ENSPEMG00000023569-5777.647ENSPEMG00000017399-9671.859
ENSPEMG00000023569-5730.769ENSPEMG00000014538Tial17831.250
ENSPEMG00000023569-7236.782ENSPEMG00000001184Celf36734.343
ENSPEMG00000023569-5777.647ENSPEMG00000014159-9671.859
ENSPEMG00000023569-10093.396ENSPEMG00000024193-10093.396
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPEMG00000023569-9997.273ENSG00000090621PABPC4100100.000Homo_sapiens
ENSPEMG00000023569-9983.943ENSAPOG00000001161pabpc410083.075Acanthochromis_polyacanthus
ENSPEMG00000023569-9856.361ENSAMEG00000015083-9955.949Ailuropoda_melanoleuca
ENSPEMG00000023569-9997.121ENSAMEG00000011535-10097.121Ailuropoda_melanoleuca
ENSPEMG00000023569-10083.750ENSACIG00000023343pabpc410082.615Amphilophus_citrinellus
ENSPEMG00000023569-9984.102ENSAOCG00000021529pabpc410083.101Amphiprion_ocellaris
ENSPEMG00000023569-9984.102ENSAPEG00000019196pabpc410083.101Amphiprion_percula
ENSPEMG00000023569-9983.386ENSATEG00000007402pabpc410082.636Anabas_testudineus
ENSPEMG00000023569-9990.000ENSAPLG00000009729-10090.000Anas_platyrhynchos
ENSPEMG00000023569-9989.267ENSACAG00000002544PABPC410089.267Anolis_carolinensis
ENSPEMG00000023569-9997.424ENSANAG00000025079PABPC410097.424Aotus_nancymaae
ENSPEMG00000023569-10083.281ENSACLG00000019558pabpc410082.636Astatotilapia_calliptera
ENSPEMG00000023569-10078.302ENSAMXG00000018779pabpc49978.931Astyanax_mexicanus
ENSPEMG00000023569-9995.159ENSBTAG00000017125PABPC410095.159Bos_taurus
ENSPEMG00000023569-5786.826ENSBTAG00000048536-9386.826Bos_taurus
ENSPEMG00000023569-7788.115ENSCJAG00000045953-9288.066Callithrix_jacchus
ENSPEMG00000023569-9996.970ENSCJAG00000002512-10096.970Callithrix_jacchus
ENSPEMG00000023569-9997.306ENSCAFG00000003081PABPC410097.306Canis_familiaris
ENSPEMG00000023569-9997.273ENSCAFG00020004161PABPC410097.273Canis_lupus_dingo
ENSPEMG00000023569-9997.273ENSCHIG00000019398-10097.273Capra_hircus
ENSPEMG00000023569-9975.303ENSCHIG00000023385-10075.303Capra_hircus
ENSPEMG00000023569-9997.121ENSTSYG00000006532PABPC410097.121Carlito_syrichta
ENSPEMG00000023569-9997.568ENSCAPG00000015984PABPC410097.568Cavia_aperea
ENSPEMG00000023569-9997.576ENSCPOG00000009552PABPC410097.576Cavia_porcellus
ENSPEMG00000023569-9997.273ENSCCAG00000037306PABPC410097.273Cebus_capucinus
ENSPEMG00000023569-9997.424ENSCATG00000042164PABPC410097.424Cercocebus_atys
ENSPEMG00000023569-9997.424ENSCLAG00000011899PABPC410097.424Chinchilla_lanigera
ENSPEMG00000023569-9997.424ENSCSAG00000001135PABPC410097.424Chlorocebus_sabaeus
ENSPEMG00000023569-8696.570ENSCHOG00000005327PABPC48196.570Choloepus_hoffmanni
ENSPEMG00000023569-9990.635ENSCPBG00000001038PABPC410090.635Chrysemys_picta_bellii
ENSPEMG00000023569-9997.235ENSCANG00000034177PABPC410097.235Colobus_angolensis_palliatus
ENSPEMG00000023569-10098.190ENSCGRG00001018166Pabpc49998.190Cricetulus_griseus_chok1gshd
ENSPEMG00000023569-9995.872ENSCGRG00000009777Pabpc49995.872Cricetulus_griseus_crigri
ENSPEMG00000023569-10082.188ENSCSEG00000000130pabpc410081.705Cynoglossus_semilaevis
ENSPEMG00000023569-9982.803ENSCVAG00000019246pabpc49982.622Cyprinodon_variegatus
ENSPEMG00000023569-9984.628ENSDARG00000059259pabpc410085.526Danio_rerio
ENSPEMG00000023569-9996.786ENSDNOG00000018444-10096.786Dasypus_novemcinctus
ENSPEMG00000023569-9995.606ENSDORG00000011581Pabpc410095.606Dipodomys_ordii
ENSPEMG00000023569-8563.889ENSETEG00000009172-9963.736Echinops_telfairi
ENSPEMG00000023569-99100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSPEMG00000023569-9877.070ENSEBUG00000000992pabpc49980.562Eptatretus_burgeri
ENSPEMG00000023569-9776.737ENSEBUG00000013782pabpc49975.949Eptatretus_burgeri
ENSPEMG00000023569-9997.273ENSEASG00005014119PABPC410097.273Equus_asinus_asinus
ENSPEMG00000023569-9997.273ENSECAG00000009396PABPC410097.273Equus_caballus
ENSPEMG00000023569-9894.745ENSEEUG00000002962PABPC410094.242Erinaceus_europaeus
ENSPEMG00000023569-9883.121ENSELUG00000003195pabpc49883.544Esox_lucius
ENSPEMG00000023569-9997.424ENSFCAG00000015254-10097.424Felis_catus
ENSPEMG00000023569-9989.841ENSFALG00000000543PABPC410089.841Ficedula_albicollis
ENSPEMG00000023569-9065.361ENSFDAG00000010581-9961.616Fukomys_damarensis
ENSPEMG00000023569-9997.424ENSFDAG00000020016-10097.424Fukomys_damarensis
ENSPEMG00000023569-10083.099ENSFHEG00000007548pabpc49390.583Fundulus_heteroclitus
ENSPEMG00000023569-9983.019ENSGMOG00000019025pabpc49981.106Gadus_morhua
ENSPEMG00000023569-9990.794ENSGALG00000003800PABPC410090.794Gallus_gallus
ENSPEMG00000023569-9990.094ENSGAFG00000018195pabpc49595.556Gambusia_affinis
ENSPEMG00000023569-10081.903ENSGACG00000007179pabpc410082.555Gasterosteus_aculeatus
ENSPEMG00000023569-9990.794ENSGAGG00000001888PABPC410090.794Gopherus_agassizii
ENSPEMG00000023569-9997.273ENSGGOG00000004002PABPC410097.273Gorilla_gorilla
ENSPEMG00000023569-10083.438ENSHBUG00000020206pabpc410082.791Haplochromis_burtoni
ENSPEMG00000023569-9997.576ENSHGLG00000011162PABPC410097.576Heterocephalus_glaber_female
ENSPEMG00000023569-9997.464ENSHGLG00100001580PABPC410097.464Heterocephalus_glaber_male
ENSPEMG00000023569-10082.602ENSHCOG00000012694pabpc49983.229Hippocampus_comes
ENSPEMG00000023569-9882.986ENSIPUG00000016620pabpc410081.135Ictalurus_punctatus
ENSPEMG00000023569-9995.152ENSSTOG00000010416PABPC410095.152Ictidomys_tridecemlineatus
ENSPEMG00000023569-9993.182ENSJJAG00000007781Pabpc410093.182Jaculus_jaculus
ENSPEMG00000023569-9990.618ENSKMAG00000013597pabpc49982.215Kryptolebias_marmoratus
ENSPEMG00000023569-9983.203ENSLBEG00000013654pabpc49981.917Labrus_bergylta
ENSPEMG00000023569-9986.751ENSLACG00000011907PABPC410086.751Latimeria_chalumnae
ENSPEMG00000023569-9984.906ENSLOCG00000001877pabpc49985.692Lepisosteus_oculatus
ENSPEMG00000023569-9997.424ENSLAFG00000000151PABPC410097.424Loxodonta_africana
ENSPEMG00000023569-9997.424ENSMFAG00000041481PABPC410097.424Macaca_fascicularis
ENSPEMG00000023569-9997.424ENSMMUG00000007497PABPC410097.424Macaca_mulatta
ENSPEMG00000023569-9997.273ENSMNEG00000043054PABPC410097.273Macaca_nemestrina
ENSPEMG00000023569-9997.424ENSMLEG00000040716PABPC410097.424Mandrillus_leucophaeus
ENSPEMG00000023569-9983.677ENSMAMG00000010025pabpc49982.710Mastacembelus_armatus
ENSPEMG00000023569-10083.125ENSMZEG00005006141pabpc410082.481Maylandia_zebra
ENSPEMG00000023569-9986.542ENSMGAG00000005408PABPC410086.542Meleagris_gallopavo
ENSPEMG00000023569-5781.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSPEMG00000023569-7289.904ENSMAUG00000001295-9789.904Mesocricetus_auratus
ENSPEMG00000023569-7895.370ENSMAUG00000019763-8495.370Mesocricetus_auratus
ENSPEMG00000023569-8994.662ENSMICG00000016633-10094.662Microcebus_murinus
ENSPEMG00000023569-9981.350ENSMICG00000036729-10083.837Microcebus_murinus
ENSPEMG00000023569-10098.336ENSMOCG00000006763Pabpc49998.336Microtus_ochrogaster
ENSPEMG00000023569-10080.094ENSMMOG00000002363pabpc49980.975Mola_mola
ENSPEMG00000023569-5973.446ENSMODG00000018051-9173.446Monodelphis_domestica
ENSPEMG00000023569-9888.117ENSMODG00000017657-10087.727Monodelphis_domestica
ENSPEMG00000023569-9982.938ENSMALG00000011017pabpc410082.071Monopterus_albus
ENSPEMG00000023569-9997.424MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSPEMG00000023569-9983.220MGP_CAROLIEiJ_G0024864-10083.220Mus_caroli
ENSPEMG00000023569-9997.727ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSPEMG00000023569-9997.389MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSPEMG00000023569-9978.455MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSPEMG00000023569-9552.483ENSMPUG00000006836-10051.741Mustela_putorius_furo
ENSPEMG00000023569-9997.424ENSMPUG00000014414-10097.424Mustela_putorius_furo
ENSPEMG00000023569-9994.929ENSMLUG00000012068PABPC410094.929Myotis_lucifugus
ENSPEMG00000023569-9995.606ENSNGAG00000018292Pabpc410095.606Nannospalax_galili
ENSPEMG00000023569-6785.876ENSNBRG00000010047-7585.876Neolamprologus_brichardi
ENSPEMG00000023569-5992.308ENSNBRG00000009708pabpc49892.308Neolamprologus_brichardi
ENSPEMG00000023569-9997.306ENSNLEG00000011928PABPC410097.306Nomascus_leucogenys
ENSPEMG00000023569-8597.684ENSOPRG00000011984PABPC48797.684Ochotona_princeps
ENSPEMG00000023569-9996.818ENSODEG00000006592-10096.818Octodon_degus
ENSPEMG00000023569-5385.714ENSODEG00000013457-10085.714Octodon_degus
ENSPEMG00000023569-9988.090ENSODEG00000017434-10088.090Octodon_degus
ENSPEMG00000023569-10083.438ENSONIG00000008176pabpc410082.481Oreochromis_niloticus
ENSPEMG00000023569-9990.317ENSOANG00000010001PABPC410090.317Ornithorhynchus_anatinus
ENSPEMG00000023569-9697.310ENSOCUG00000000562PABPC48897.310Oryctolagus_cuniculus
ENSPEMG00000023569-9990.741ENSORLG00000017479pabpc49990.741Oryzias_latipes
ENSPEMG00000023569-9990.741ENSORLG00020018644pabpc410090.741Oryzias_latipes_hni
ENSPEMG00000023569-9990.741ENSORLG00015015042pabpc410090.741Oryzias_latipes_hsok
ENSPEMG00000023569-9983.280ENSOMEG00000014410pabpc410083.065Oryzias_melastigma
ENSPEMG00000023569-9994.721ENSOGAG00000004067PABPC410094.721Otolemur_garnettii
ENSPEMG00000023569-9997.273ENSOARG00000020060PABPC410097.273Ovis_aries
ENSPEMG00000023569-9997.273ENSPPAG00000043625PABPC410097.273Pan_paniscus
ENSPEMG00000023569-9997.424ENSPPRG00000024727PABPC410097.424Panthera_pardus
ENSPEMG00000023569-9997.424ENSPTIG00000005829PABPC410097.424Panthera_tigris_altaica
ENSPEMG00000023569-9997.273ENSPTRG00000000573PABPC410097.273Pan_troglodytes
ENSPEMG00000023569-9997.576ENSPANG00000009484PABPC410097.576Papio_anubis
ENSPEMG00000023569-9983.937ENSPKIG00000025356pabpc49984.567Paramormyrops_kingsleyae
ENSPEMG00000023569-9990.635ENSPSIG00000016892PABPC410090.635Pelodiscus_sinensis
ENSPEMG00000023569-10081.447ENSPMGG00000009073pabpc49981.348Periophthalmus_magnuspinnatus
ENSPEMG00000023569-9570.697ENSPMAG00000007885pabpc49969.368Petromyzon_marinus
ENSPEMG00000023569-8973.830ENSPMAG00000002836pabpc410073.711Petromyzon_marinus
ENSPEMG00000023569-9793.317ENSPCIG00000020674PABPC410093.317Phascolarctos_cinereus
ENSPEMG00000023569-10082.316ENSPFOG00000002682pabpc410082.298Poecilia_formosa
ENSPEMG00000023569-10082.160ENSPLAG00000010112pabpc410082.453Poecilia_latipinna
ENSPEMG00000023569-9982.671ENSPMEG00000019739pabpc410082.298Poecilia_mexicana
ENSPEMG00000023569-10082.993ENSPREG00000001589pabpc410082.993Poecilia_reticulata
ENSPEMG00000023569-9997.273ENSPPYG00000001506PABPC410097.273Pongo_abelii
ENSPEMG00000023569-9992.273ENSPCAG00000003341PABPC410092.273Procavia_capensis
ENSPEMG00000023569-9980.645ENSPCOG00000025882-9785.455Propithecus_coquereli
ENSPEMG00000023569-9997.428ENSPCOG00000023725-10097.428Propithecus_coquereli
ENSPEMG00000023569-9996.471ENSPVAG00000002187PABPC410096.471Pteropus_vampyrus
ENSPEMG00000023569-10083.281ENSPNYG00000006134pabpc410082.636Pundamilia_nyererei
ENSPEMG00000023569-10083.568ENSPNAG00000024355pabpc410082.435Pygocentrus_nattereri
ENSPEMG00000023569-9993.030ENSRNOG00000028592AABR07035074.110093.030Rattus_norvegicus
ENSPEMG00000023569-9995.152ENSRNOG00000015642Pabpc410095.152Rattus_norvegicus
ENSPEMG00000023569-9997.424ENSRBIG00000039761PABPC410097.424Rhinopithecus_bieti
ENSPEMG00000023569-9997.424ENSRROG00000033355PABPC410097.424Rhinopithecus_roxellana
ENSPEMG00000023569-9997.424ENSSBOG00000026193PABPC410097.424Saimiri_boliviensis_boliviensis
ENSPEMG00000023569-9890.939ENSSHAG00000018139PABPC410090.476Sarcophilus_harrisii
ENSPEMG00000023569-9985.550ENSSFOG00015023514pabpc49984.790Scleropages_formosus
ENSPEMG00000023569-9982.205ENSSMAG00000009007pabpc49981.875Scophthalmus_maximus
ENSPEMG00000023569-9983.201ENSSDUG00000012683pabpc49588.046Seriola_dumerili
ENSPEMG00000023569-9983.201ENSSLDG00000013025pabpc49786.957Seriola_lalandi_dorsalis
ENSPEMG00000023569-9989.848ENSSARG00000000310PABPC410089.848Sorex_araneus
ENSPEMG00000023569-9989.048ENSSPUG00000003204PABPC410089.048Sphenodon_punctatus
ENSPEMG00000023569-9990.562ENSSPAG00000009252pabpc49890.359Stegastes_partitus
ENSPEMG00000023569-9997.424ENSSSCG00000003660-10097.424Sus_scrofa
ENSPEMG00000023569-8949.495ENSSSCG00000036170-9649.495Sus_scrofa
ENSPEMG00000023569-9986.233ENSTGUG00000001266PABPC410086.233Taeniopygia_guttata
ENSPEMG00000023569-10081.947ENSTRUG00000005907pabpc49982.031Takifugu_rubripes
ENSPEMG00000023569-10078.357ENSTNIG00000016902pabpc49978.247Tetraodon_nigroviridis
ENSPEMG00000023569-9985.882ENSTBEG00000009035PABPC410085.882Tupaia_belangeri
ENSPEMG00000023569-9981.418ENSTTRG00000014340PABPC410085.378Tursiops_truncatus
ENSPEMG00000023569-9997.147ENSUAMG00000000303PABPC410097.147Ursus_americanus
ENSPEMG00000023569-9997.121ENSUMAG00000019585PABPC410097.121Ursus_maritimus
ENSPEMG00000023569-8493.617ENSVPAG00000010041PABPC47793.617Vicugna_pacos
ENSPEMG00000023569-9997.306ENSVVUG00000005215PABPC410097.306Vulpes_vulpes
ENSPEMG00000023569-9982.540ENSXETG00000010946pabpc410082.540Xenopus_tropicalis
ENSPEMG00000023569-6397.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSPEMG00000023569-9989.091ENSXCOG00000013190pabpc49690.094Xiphophorus_couchianus
ENSPEMG00000023569-10082.473ENSXMAG00000019007pabpc410082.298Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us