EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000023841 (Gene tree)
Gene ID: 102918741
Gene Symbol: Apobec1
Alias: -
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 12861 bases
Position: chrKI616039.1:35538-48398
Accession: 102918741
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000028263	APOBEC_N	PF08210.11	3.2e-30	1	1
ENSPEMP00000028263	APOBEC_C	PF05240.14	7.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000032684	-	2049	XM_015987734	ENSPEMP00000028263	229 (aa)	XP_015843220	UPI00077DD3F3

Gene Model

Click here to download ENSPEMG00000023841's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000023841's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000023841	Apobec1	100	70.306	ENSG00000111701	APOBEC1	97	70.306	Homo_sapiens
ENSPEMG00000023841	Apobec1	100	68.996	ENSAMEG00000007098	APOBEC1	97	68.996	Ailuropoda_melanoleuca
ENSPEMG00000023841	Apobec1	67	46.203	ENSACAG00000028578	-	84	46.203	Anolis_carolinensis
ENSPEMG00000023841	Apobec1	100	68.559	ENSANAG00000027743	APOBEC1	92	68.559	Aotus_nancymaae
ENSPEMG00000023841	Apobec1	100	66.812	ENSBTAG00000014683	APOBEC1	97	66.812	Bos_taurus
ENSPEMG00000023841	Apobec1	93	69.159	ENSCJAG00000005398	APOBEC1	97	69.159	Callithrix_jacchus
ENSPEMG00000023841	Apobec1	100	69.869	ENSCAFG00000013901	APOBEC1	97	69.869	Canis_familiaris
ENSPEMG00000023841	Apobec1	99	68.421	ENSCAFG00020003511	APOBEC1	95	68.421	Canis_lupus_dingo
ENSPEMG00000023841	Apobec1	100	64.629	ENSCHIG00000011898	APOBEC1	95	64.629	Capra_hircus
ENSPEMG00000023841	Apobec1	61	67.857	ENSTSYG00000029141	APOBEC1	99	67.857	Carlito_syrichta
ENSPEMG00000023841	Apobec1	93	62.617	ENSCAPG00000015882	-	99	62.617	Cavia_aperea
ENSPEMG00000023841	Apobec1	100	62.009	ENSCPOG00000033068	APOBEC1	97	62.009	Cavia_porcellus
ENSPEMG00000023841	Apobec1	100	69.432	ENSCCAG00000022258	APOBEC1	97	69.432	Cebus_capucinus
ENSPEMG00000023841	Apobec1	100	69.432	ENSCATG00000021613	APOBEC1	92	69.432	Cercocebus_atys
ENSPEMG00000023841	Apobec1	100	62.882	ENSCLAG00000014645	APOBEC1	99	62.882	Chinchilla_lanigera
ENSPEMG00000023841	Apobec1	79	70.556	ENSCSAG00000009817	APOBEC1	94	70.556	Chlorocebus_sabaeus
ENSPEMG00000023841	Apobec1	76	46.927	ENSCPBG00000017398	-	79	46.927	Chrysemys_picta_bellii
ENSPEMG00000023841	Apobec1	81	48.128	ENSCPBG00000014335	-	76	48.128	Chrysemys_picta_bellii
ENSPEMG00000023841	Apobec1	97	43.231	ENSCPBG00000014331	-	90	43.231	Chrysemys_picta_bellii
ENSPEMG00000023841	Apobec1	95	38.914	ENSCPBG00000014327	-	86	38.914	Chrysemys_picta_bellii
ENSPEMG00000023841	Apobec1	85	44.898	ENSCPBG00000014329	-	54	44.898	Chrysemys_picta_bellii
ENSPEMG00000023841	Apobec1	95	42.081	ENSCPBG00000014328	-	96	42.081	Chrysemys_picta_bellii
ENSPEMG00000023841	Apobec1	97	69.955	ENSCANG00000038359	APOBEC1	97	69.955	Colobus_angolensis_palliatus
ENSPEMG00000023841	Apobec1	100	83.843	ENSCGRG00001011130	Apobec1	100	83.843	Cricetulus_griseus_chok1gshd
ENSPEMG00000023841	Apobec1	100	83.843	ENSCGRG00000008644	Apobec1	100	83.843	Cricetulus_griseus_crigri
ENSPEMG00000023841	Apobec1	100	71.179	ENSDNOG00000010926	APOBEC1	97	71.179	Dasypus_novemcinctus
ENSPEMG00000023841	Apobec1	93	61.215	ENSDORG00000023717	Apobec1	100	61.215	Dipodomys_ordii
ENSPEMG00000023841	Apobec1	100	66.957	ENSETEG00000004867	APOBEC1	97	66.957	Echinops_telfairi
ENSPEMG00000023841	Apobec1	100	71.616	ENSEASG00005015951	APOBEC1	96	71.616	Equus_asinus_asinus
ENSPEMG00000023841	Apobec1	79	73.077	ENSECAG00000017163	APOBEC1	95	73.077	Equus_caballus
ENSPEMG00000023841	Apobec1	94	61.111	ENSEEUG00000009112	-	96	61.111	Erinaceus_europaeus
ENSPEMG00000023841	Apobec1	89	49.510	ENSEEUG00000007530	-	97	49.510	Erinaceus_europaeus
ENSPEMG00000023841	Apobec1	100	70.306	ENSFCAG00000009350	APOBEC1	97	70.306	Felis_catus
ENSPEMG00000023841	Apobec1	62	53.521	ENSFALG00000007257	-	70	53.521	Ficedula_albicollis
ENSPEMG00000023841	Apobec1	88	54.229	ENSFDAG00000018470	APOBEC1	97	54.229	Fukomys_damarensis
ENSPEMG00000023841	Apobec1	74	44.253	ENSGAGG00000021745	-	64	44.253	Gopherus_agassizii
ENSPEMG00000023841	Apobec1	78	46.667	ENSGAGG00000021744	-	71	46.667	Gopherus_agassizii
ENSPEMG00000023841	Apobec1	94	47.926	ENSGAGG00000011837	-	85	54.237	Gopherus_agassizii
ENSPEMG00000023841	Apobec1	75	45.665	ENSGAGG00000004947	-	86	45.665	Gopherus_agassizii
ENSPEMG00000023841	Apobec1	74	46.199	ENSGAGG00000006624	-	62	46.199	Gopherus_agassizii
ENSPEMG00000023841	Apobec1	100	61.135	ENSHGLG00000001495	APOBEC1	97	61.135	Heterocephalus_glaber_female
ENSPEMG00000023841	Apobec1	100	60.699	ENSHGLG00100002187	APOBEC1	97	60.699	Heterocephalus_glaber_male
ENSPEMG00000023841	Apobec1	93	58.411	ENSSTOG00000021971	APOBEC1	99	71.134	Ictidomys_tridecemlineatus
ENSPEMG00000023841	Apobec1	100	71.179	ENSJJAG00000022108	Apobec1	100	71.179	Jaculus_jaculus
ENSPEMG00000023841	Apobec1	94	72.222	ENSLAFG00000030837	APOBEC1	97	72.222	Loxodonta_africana
ENSPEMG00000023841	Apobec1	100	69.432	ENSMFAG00000000277	APOBEC1	97	69.432	Macaca_fascicularis
ENSPEMG00000023841	Apobec1	100	69.432	ENSMNEG00000029670	APOBEC1	97	69.432	Macaca_nemestrina
ENSPEMG00000023841	Apobec1	100	69.432	ENSMLEG00000036301	APOBEC1	97	69.432	Mandrillus_leucophaeus
ENSPEMG00000023841	Apobec1	94	82.870	ENSMAUG00000022167	Apobec1	97	82.870	Mesocricetus_auratus
ENSPEMG00000023841	Apobec1	100	68.122	ENSMICG00000043645	APOBEC1	97	68.122	Microcebus_murinus
ENSPEMG00000023841	Apobec1	100	63.755	ENSMODG00000018004	APOBEC1	97	63.755	Monodelphis_domestica
ENSPEMG00000023841	Apobec1	99	83.333	ENSMUSG00000040613	Apobec1	100	82.645	Mus_musculus
ENSPEMG00000023841	Apobec1	99	82.456	MGP_PahariEiJ_G0022580	-	100	81.818	Mus_pahari
ENSPEMG00000023841	Apobec1	99	83.333	MGP_SPRETEiJ_G0029857	Apobec1	100	82.645	Mus_spretus
ENSPEMG00000023841	Apobec1	100	68.122	ENSMPUG00000017532	APOBEC1	97	68.122	Mustela_putorius_furo
ENSPEMG00000023841	Apobec1	100	75.983	ENSNGAG00000022607	Apobec1	100	75.983	Nannospalax_galili
ENSPEMG00000023841	Apobec1	100	69.432	ENSNLEG00000005342	APOBEC1	97	69.432	Nomascus_leucogenys
ENSPEMG00000023841	Apobec1	100	60.262	ENSMEUG00000013406	APOBEC1	97	60.262	Notamacropus_eugenii
ENSPEMG00000023841	Apobec1	79	55.801	ENSOPRG00000009508	-	100	55.801	Ochotona_princeps
ENSPEMG00000023841	Apobec1	100	65.939	ENSOCUG00000025736	APOBEC1	86	65.939	Oryctolagus_cuniculus
ENSPEMG00000023841	Apobec1	100	69.869	ENSOGAG00000026415	APOBEC1	97	69.869	Otolemur_garnettii
ENSPEMG00000023841	Apobec1	100	65.502	ENSOARG00000002072	APOBEC1	96	65.502	Ovis_aries
ENSPEMG00000023841	Apobec1	100	65.939	ENSPPAG00000027657	APOBEC1	97	65.939	Pan_paniscus
ENSPEMG00000023841	Apobec1	100	70.742	ENSPPRG00000012182	APOBEC1	97	70.742	Panthera_pardus
ENSPEMG00000023841	Apobec1	100	70.742	ENSPTIG00000020280	APOBEC1	97	70.742	Panthera_tigris_altaica
ENSPEMG00000023841	Apobec1	100	69.869	ENSPTRG00000004614	APOBEC1	97	69.869	Pan_troglodytes
ENSPEMG00000023841	Apobec1	100	69.869	ENSPANG00000021027	APOBEC1	97	69.869	Papio_anubis
ENSPEMG00000023841	Apobec1	81	43.548	ENSPSIG00000012568	-	81	43.548	Pelodiscus_sinensis
ENSPEMG00000023841	Apobec1	55	53.608	ENSPSIG00000012791	-	68	53.608	Pelodiscus_sinensis
ENSPEMG00000023841	Apobec1	100	63.319	ENSPCIG00000023973	APOBEC1	97	63.319	Phascolarctos_cinereus
ENSPEMG00000023841	Apobec1	100	69.432	ENSPPYG00000004228	APOBEC1	92	69.432	Pongo_abelii
ENSPEMG00000023841	Apobec1	82	68.449	ENSPCAG00000008733	APOBEC1	100	68.449	Procavia_capensis
ENSPEMG00000023841	Apobec1	94	70.233	ENSPCOG00000013957	APOBEC1	95	70.233	Propithecus_coquereli
ENSPEMG00000023841	Apobec1	100	55.459	ENSPVAG00000010709	APOBEC1	97	55.459	Pteropus_vampyrus
ENSPEMG00000023841	Apobec1	99	80.702	ENSRNOG00000015411	Apobec1	99	80.702	Rattus_norvegicus
ENSPEMG00000023841	Apobec1	100	68.559	ENSRBIG00000031161	APOBEC1	97	68.559	Rhinopithecus_bieti
ENSPEMG00000023841	Apobec1	100	68.559	ENSRROG00000033576	APOBEC1	97	68.559	Rhinopithecus_roxellana
ENSPEMG00000023841	Apobec1	76	68.786	ENSSBOG00000030587	APOBEC1	98	68.786	Saimiri_boliviensis_boliviensis
ENSPEMG00000023841	Apobec1	96	63.470	ENSSHAG00000008925	APOBEC1	96	63.470	Sarcophilus_harrisii
ENSPEMG00000023841	Apobec1	56	68.992	ENSSARG00000011972	-	98	68.992	Sorex_araneus
ENSPEMG00000023841	Apobec1	75	64.535	ENSSARG00000000032	-	100	64.535	Sorex_araneus
ENSPEMG00000023841	Apobec1	89	44.928	ENSSPUG00000009044	-	79	44.928	Sphenodon_punctatus
ENSPEMG00000023841	Apobec1	100	70.306	ENSSSCG00000000668	APOBEC1	97	70.306	Sus_scrofa
ENSPEMG00000023841	Apobec1	63	52.740	ENSTGUG00000013118	-	100	52.740	Taeniopygia_guttata
ENSPEMG00000023841	Apobec1	100	64.629	ENSTBEG00000010043	APOBEC1	97	64.629	Tupaia_belangeri
ENSPEMG00000023841	Apobec1	82	68.984	ENSTTRG00000014015	APOBEC1	100	68.984	Tursiops_truncatus
ENSPEMG00000023841	Apobec1	100	68.996	ENSUAMG00000011636	APOBEC1	94	68.996	Ursus_americanus
ENSPEMG00000023841	Apobec1	100	68.996	ENSUMAG00000016552	APOBEC1	94	68.996	Ursus_maritimus
ENSPEMG00000023841	Apobec1	100	68.559	ENSVPAG00000001343	APOBEC1	97	68.559	Vicugna_pacos
ENSPEMG00000023841	Apobec1	100	69.869	ENSVVUG00000010522	APOBEC1	97	69.869	Vulpes_vulpes