EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000023883 (Gene tree)
Gene ID: 102907624
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 260-like
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 7716 bases
Position: chrKI616443.1:165181-172896
Accession: 102907624
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000028324	zf-C2H2	PF00096.26	7.9e-64	1	12
ENSPEMP00000028324	zf-C2H2	PF00096.26	7.9e-64	2	12
ENSPEMP00000028324	zf-C2H2	PF00096.26	7.9e-64	3	12
ENSPEMP00000028324	zf-C2H2	PF00096.26	7.9e-64	4	12
ENSPEMP00000028324	zf-C2H2	PF00096.26	7.9e-64	5	12
ENSPEMP00000028324	zf-C2H2	PF00096.26	7.9e-64	6	12
ENSPEMP00000028324	zf-C2H2	PF00096.26	7.9e-64	7	12
ENSPEMP00000028324	zf-C2H2	PF00096.26	7.9e-64	8	12
ENSPEMP00000028324	zf-C2H2	PF00096.26	7.9e-64	9	12
ENSPEMP00000028324	zf-C2H2	PF00096.26	7.9e-64	10	12
ENSPEMP00000028324	zf-C2H2	PF00096.26	7.9e-64	11	12
ENSPEMP00000028324	zf-C2H2	PF00096.26	7.9e-64	12	12
ENSPEMP00000028324	zf-met	PF12874.7	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000032745	-	1791	XM_015990048	ENSPEMP00000028324	597 (aa)	XP_015845534	-

Gene Model

Click here to download ENSPEMG00000023883's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000023883's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000023883	-	86	50.000	ENSPEMG00000023566	Zfp768	52	49.462
ENSPEMG00000023883	-	89	51.163	ENSPEMG00000010242	-	73	51.163
ENSPEMG00000023883	-	90	38.315	ENSPEMG00000016745	Zfp319	90	33.894
ENSPEMG00000023883	-	71	43.369	ENSPEMG00000021923	Zbtb17	62	43.369
ENSPEMG00000023883	-	99	50.397	ENSPEMG00000024167	Zfp354a	99	50.397
ENSPEMG00000023883	-	98	42.540	ENSPEMG00000016507	Zfp26	89	42.540
ENSPEMG00000023883	-	100	53.909	ENSPEMG00000007241	-	99	55.396
ENSPEMG00000023883	-	98	50.588	ENSPEMG00000014415	Zfp1	100	50.588
ENSPEMG00000023883	-	86	46.239	ENSPEMG00000000472	Zfp28	56	46.239
ENSPEMG00000023883	-	82	34.715	ENSPEMG00000018947	Zfp784	80	34.715
ENSPEMG00000023883	-	70	36.559	ENSPEMG00000005321	Patz1	53	30.814
ENSPEMG00000023883	-	81	35.345	ENSPEMG00000016061	Zfp574	72	33.871
ENSPEMG00000023883	-	100	70.049	ENSPEMG00000023329	-	100	68.297
ENSPEMG00000023883	-	87	39.175	ENSPEMG00000016757	Zfp408	55	36.691
ENSPEMG00000023883	-	81	54.468	ENSPEMG00000021937	-	90	54.468
ENSPEMG00000023883	-	100	52.143	ENSPEMG00000014281	-	100	77.193
ENSPEMG00000023883	-	71	42.056	ENSPEMG00000023213	Snai1	51	42.056
ENSPEMG00000023883	-	99	50.394	ENSPEMG00000022945	-	83	50.394
ENSPEMG00000023883	-	86	52.397	ENSPEMG00000007461	-	89	52.397
ENSPEMG00000023883	-	98	43.132	ENSPEMG00000020934	-	100	43.041
ENSPEMG00000023883	-	88	33.333	ENSPEMG00000000870	Repin1	91	33.540
ENSPEMG00000023883	-	82	38.961	ENSPEMG00000020736	Zfp672	91	38.298
ENSPEMG00000023883	-	98	47.079	ENSPEMG00000023985	Zfp61	99	47.079
ENSPEMG00000023883	-	71	45.098	ENSPEMG00000022216	-	99	45.098
ENSPEMG00000023883	-	95	55.581	ENSPEMG00000008817	-	100	55.581
ENSPEMG00000023883	-	99	36.986	ENSPEMG00000016975	Zfp940	99	36.007
ENSPEMG00000023883	-	98	45.690	ENSPEMG00000020749	-	99	45.161
ENSPEMG00000023883	-	100	57.358	ENSPEMG00000011776	-	100	57.358
ENSPEMG00000023883	-	77	38.356	ENSPEMG00000023302	-	71	38.356
ENSPEMG00000023883	-	99	49.196	ENSPEMG00000000860	Zfp94	96	49.196
ENSPEMG00000023883	-	70	43.443	ENSPEMG00000015555	BC025920	97	43.443
ENSPEMG00000023883	-	98	60.642	ENSPEMG00000008173	-	100	58.824
ENSPEMG00000023883	-	98	49.115	ENSPEMG00000021570	Zkscan3	59	50.218
ENSPEMG00000023883	-	69	42.105	ENSPEMG00000012225	Snai3	55	42.105
ENSPEMG00000023883	-	99	42.581	ENSPEMG00000017339	2610008E11Rik	99	42.581
ENSPEMG00000023883	-	98	47.961	ENSPEMG00000021548	Zfp712	98	47.961
ENSPEMG00000023883	-	73	41.739	ENSPEMG00000001292	Wt1	53	40.678
ENSPEMG00000023883	-	98	43.487	ENSPEMG00000022834	Zfp709	99	43.487
ENSPEMG00000023883	-	99	43.342	ENSPEMG00000009428	Zfp39	92	42.605
ENSPEMG00000023883	-	70	42.268	ENSPEMG00000015523	Zfp423	98	38.393
ENSPEMG00000023883	-	98	48.449	ENSPEMG00000000403	-	89	48.449
ENSPEMG00000023883	-	72	41.328	ENSPEMG00000011285	Gzf1	53	41.328
ENSPEMG00000023883	-	99	48.668	ENSPEMG00000018022	-	99	48.184
ENSPEMG00000023883	-	70	38.931	ENSPEMG00000011739	Snai2	50	38.931
ENSPEMG00000023883	-	82	31.278	ENSPEMG00000014980	Zfp64	70	39.016
ENSPEMG00000023883	-	86	47.644	ENSPEMG00000009113	Zfp628	62	33.127
ENSPEMG00000023883	-	100	49.493	ENSPEMG00000000548	-	99	49.493
ENSPEMG00000023883	-	97	47.233	ENSPEMG00000007595	-	99	47.233

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000023883	-	85	57.875	ENSCING00000003470	-	94	57.875	Ciona_intestinalis
ENSPEMG00000023883	-	87	55.155	ENSCING00000018801	zf(c2h2)-138	92	55.155	Ciona_intestinalis
ENSPEMG00000023883	-	86	49.281	ENSCSAVG00000010156	-	96	49.281	Ciona_savignyi
ENSPEMG00000023883	-	98	54.000	ENSCGRG00001007163	-	99	54.000	Cricetulus_griseus_chok1gshd
ENSPEMG00000023883	-	83	47.379	ENSCGRG00001013602	-	97	47.177	Cricetulus_griseus_chok1gshd
ENSPEMG00000023883	-	93	44.444	ENSCGRG00001002297	-	99	44.444	Cricetulus_griseus_chok1gshd
ENSPEMG00000023883	-	98	61.004	ENSCGRG00000000778	-	96	61.004	Cricetulus_griseus_crigri
ENSPEMG00000023883	-	100	47.300	ENSCGRG00000018332	Zfp53	94	47.300	Cricetulus_griseus_crigri
ENSPEMG00000023883	-	87	42.289	ENSEBUG00000012454	-	98	42.289	Eptatretus_burgeri
ENSPEMG00000023883	-	82	41.689	ENSEBUG00000001525	-	86	41.689	Eptatretus_burgeri
ENSPEMG00000023883	-	81	47.973	ENSEBUG00000008792	-	88	47.973	Eptatretus_burgeri
ENSPEMG00000023883	-	82	52.734	ENSEBUG00000005655	-	76	45.385	Eptatretus_burgeri
ENSPEMG00000023883	-	81	46.348	ENSEBUG00000016878	-	93	44.568	Eptatretus_burgeri
ENSPEMG00000023883	-	90	44.760	ENSEBUG00000012823	-	83	44.760	Eptatretus_burgeri
ENSPEMG00000023883	-	100	81.491	ENSMAUG00000000939	-	97	62.814	Mesocricetus_auratus
ENSPEMG00000023883	-	100	57.031	ENSMAUG00000004844	-	100	57.031	Mesocricetus_auratus
ENSPEMG00000023883	-	96	46.859	ENSMAUG00000005974	-	99	46.859	Mesocricetus_auratus
ENSPEMG00000023883	-	97	53.271	ENSMOCG00000007851	-	100	53.271	Microtus_ochrogaster
ENSPEMG00000023883	-	100	48.382	ENSMOCG00000006946	Zfp53	98	47.627	Microtus_ochrogaster
ENSPEMG00000023883	-	100	44.984	MGP_CAROLIEiJ_G0021132	Zfp948	99	44.288	Mus_caroli
ENSPEMG00000023883	-	100	48.609	ENSMUSG00000062743	Zfp677	100	48.458	Mus_musculus
ENSPEMG00000023883	-	86	44.412	ENSPSIG00000009270	-	86	44.412	Pelodiscus_sinensis
ENSPEMG00000023883	-	98	49.088	ENSRNOG00000052406	LOC102552527	99	49.088	Rattus_norvegicus