EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000024193 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: polyadenylate-binding protein 4-like
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 1981 bases
Position: chrKI616197.1:1052278-1054258
Accession: 102906476
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000028741	PABP	PF00658.18	1.4e-31	1	1
ENSPEMP00000028741	RRM_5	PF13893.6	4.1e-07	1	1
ENSPEMP00000028741	RRM_1	PF00076.22	7.3e-77	1	4
ENSPEMP00000028741	RRM_1	PF00076.22	7.3e-77	2	4
ENSPEMP00000028741	RRM_1	PF00076.22	7.3e-77	3	4
ENSPEMP00000028741	RRM_1	PF00076.22	7.3e-77	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000033164	-	1872	XM_015988817	ENSPEMP00000028741	623 (aa)	XP_015844303	-

Gene Model

Click here to download ENSPEMG00000024193's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000024193's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000024193	-	57	32.895	ENSPEMG00000022021	Elavl1	95	32.895
ENSPEMG00000024193	-	56	78.235	ENSPEMG00000014159	-	96	72.308
ENSPEMG00000024193	-	57	36.364	ENSPEMG00000017244	Celf2	58	36.364
ENSPEMG00000024193	-	58	30.921	ENSPEMG00000014101	Elavl2	86	30.921
ENSPEMG00000024193	-	57	63.764	ENSPEMG00000000171	Pabpc5	95	63.636
ENSPEMG00000024193	-	100	93.396	ENSPEMG00000023569	-	100	93.396
ENSPEMG00000024193	-	56	78.235	ENSPEMG00000017399	-	96	72.308
ENSPEMG00000024193	-	99	66.822	ENSPEMG00000011901	Pabpc6	99	66.822
ENSPEMG00000024193	-	99	69.194	ENSPEMG00000013149	Pabpc2	99	68.671
ENSPEMG00000024193	-	60	65.041	ENSPEMG00000012565	Pabpc4l	99	65.041
ENSPEMG00000024193	-	56	35.802	ENSPEMG00000001090	Tia1	85	30.279
ENSPEMG00000024193	-	97	58.537	ENSPEMG00000020671	Pabpc1l	98	58.211
ENSPEMG00000024193	-	98	76.312	ENSPEMG00000014998	Pabpc1	98	76.312
ENSPEMG00000024193	-	58	30.189	ENSPEMG00000021782	Elavl4	89	30.189

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000024193	-	99	93.323	ENSG00000090621	PABPC4	99	99.099	Homo_sapiens
ENSPEMG00000024193	-	99	80.411	ENSAPOG00000001161	pabpc4	100	80.495	Acanthochromis_polyacanthus
ENSPEMG00000024193	-	98	52.960	ENSAMEG00000015083	-	99	52.556	Ailuropoda_melanoleuca
ENSPEMG00000024193	-	99	90.909	ENSAMEG00000011535	-	100	90.909	Ailuropoda_melanoleuca
ENSPEMG00000024193	-	100	80.124	ENSACIG00000023343	pabpc4	100	79.815	Amphilophus_citrinellus
ENSPEMG00000024193	-	99	80.727	ENSAOCG00000021529	pabpc4	100	80.495	Amphiprion_ocellaris
ENSPEMG00000024193	-	99	80.727	ENSAPEG00000019196	pabpc4	100	80.495	Amphiprion_percula
ENSPEMG00000024193	-	99	79.749	ENSATEG00000007402	pabpc4	100	79.753	Anabas_testudineus
ENSPEMG00000024193	-	99	85.150	ENSAPLG00000009729	-	100	85.150	Anas_platyrhynchos
ENSPEMG00000024193	-	99	84.014	ENSACAG00000002544	PABPC4	100	84.014	Anolis_carolinensis
ENSPEMG00000024193	-	99	91.061	ENSANAG00000025079	PABPC4	100	91.061	Aotus_nancymaae
ENSPEMG00000024193	-	100	79.814	ENSACLG00000019558	pabpc4	100	79.141	Astatotilapia_calliptera
ENSPEMG00000024193	-	100	74.611	ENSAMXG00000018779	pabpc4	99	74.729	Astyanax_mexicanus
ENSPEMG00000024193	-	99	93.178	ENSBTAG00000017125	PABPC4	100	93.178	Bos_taurus
ENSPEMG00000024193	-	51	86.667	ENSBTAG00000048536	-	91	86.667	Bos_taurus
ENSPEMG00000024193	-	99	90.758	ENSCJAG00000002512	-	100	90.758	Callithrix_jacchus
ENSPEMG00000024193	-	77	85.887	ENSCJAG00000045953	-	92	85.830	Callithrix_jacchus
ENSPEMG00000024193	-	99	91.181	ENSCAFG00000003081	PABPC4	100	91.181	Canis_familiaris
ENSPEMG00000024193	-	99	91.061	ENSCAFG00020004161	PABPC4	100	91.061	Canis_lupus_dingo
ENSPEMG00000024193	-	99	90.909	ENSCHIG00000019398	-	100	90.909	Capra_hircus
ENSPEMG00000024193	-	99	74.375	ENSCHIG00000023385	-	100	74.375	Capra_hircus
ENSPEMG00000024193	-	99	90.909	ENSTSYG00000006532	PABPC4	100	90.909	Carlito_syrichta
ENSPEMG00000024193	-	99	91.324	ENSCAPG00000015984	PABPC4	99	91.324	Cavia_aperea
ENSPEMG00000024193	-	99	91.212	ENSCPOG00000009552	PABPC4	100	91.212	Cavia_porcellus
ENSPEMG00000024193	-	99	91.061	ENSCCAG00000037306	PABPC4	100	91.061	Cebus_capucinus
ENSPEMG00000024193	-	99	91.212	ENSCATG00000042164	PABPC4	100	91.212	Cercocebus_atys
ENSPEMG00000024193	-	99	91.212	ENSCLAG00000011899	PABPC4	100	91.212	Chinchilla_lanigera
ENSPEMG00000024193	-	99	91.212	ENSCSAG00000001135	PABPC4	100	91.212	Chlorocebus_sabaeus
ENSPEMG00000024193	-	85	92.348	ENSCHOG00000005327	PABPC4	81	92.348	Choloepus_hoffmanni
ENSPEMG00000024193	-	99	85.759	ENSCPBG00000001038	PABPC4	99	85.759	Chrysemys_picta_bellii
ENSPEMG00000024193	-	99	91.091	ENSCANG00000034177	PABPC4	100	91.091	Colobus_angolensis_palliatus
ENSPEMG00000024193	-	100	91.554	ENSCGRG00001018166	Pabpc4	99	91.554	Cricetulus_griseus_chok1gshd
ENSPEMG00000024193	-	99	93.887	ENSCGRG00000009777	Pabpc4	99	93.887	Cricetulus_griseus_crigri
ENSPEMG00000024193	-	100	79.658	ENSCSEG00000000130	pabpc4	100	79.141	Cynoglossus_semilaevis
ENSPEMG00000024193	-	99	79.747	ENSCVAG00000019246	pabpc4	99	80.063	Cyprinodon_variegatus
ENSPEMG00000024193	-	99	80.282	ENSDARG00000059259	pabpc4	100	79.133	Danio_rerio
ENSPEMG00000024193	-	99	90.248	ENSDNOG00000018444	-	100	90.248	Dasypus_novemcinctus
ENSPEMG00000024193	-	99	93.789	ENSDORG00000011581	Pabpc4	100	93.789	Dipodomys_ordii
ENSPEMG00000024193	-	99	98.438	ENSETEG00000018453	-	84	98.438	Echinops_telfairi
ENSPEMG00000024193	-	85	59.594	ENSETEG00000009172	-	99	59.489	Echinops_telfairi
ENSPEMG00000024193	-	97	74.677	ENSEBUG00000013782	pabpc4	99	73.783	Eptatretus_burgeri
ENSPEMG00000024193	-	98	74.404	ENSEBUG00000000992	pabpc4	99	74.204	Eptatretus_burgeri
ENSPEMG00000024193	-	99	91.212	ENSEASG00005014119	PABPC4	100	91.212	Equus_asinus_asinus
ENSPEMG00000024193	-	99	91.212	ENSECAG00000009396	PABPC4	100	91.212	Equus_caballus
ENSPEMG00000024193	-	98	88.408	ENSEEUG00000002962	PABPC4	100	88.030	Erinaceus_europaeus
ENSPEMG00000024193	-	99	79.403	ENSELUG00000003195	pabpc4	99	78.615	Esox_lucius
ENSPEMG00000024193	-	99	91.212	ENSFCAG00000015254	-	100	91.212	Felis_catus
ENSPEMG00000024193	-	99	85.174	ENSFALG00000000543	PABPC4	99	85.174	Ficedula_albicollis
ENSPEMG00000024193	-	99	91.212	ENSFDAG00000020016	-	100	91.212	Fukomys_damarensis
ENSPEMG00000024193	-	89	61.239	ENSFDAG00000010581	-	99	61.239	Fukomys_damarensis
ENSPEMG00000024193	-	100	80.093	ENSFHEG00000007548	pabpc4	100	80.401	Fundulus_heteroclitus
ENSPEMG00000024193	-	99	79.782	ENSGMOG00000019025	pabpc4	99	80.280	Gadus_morhua
ENSPEMG00000024193	-	99	86.054	ENSGALG00000003800	PABPC4	99	86.054	Gallus_gallus
ENSPEMG00000024193	-	99	87.264	ENSGAFG00000018195	pabpc4	95	94.444	Gambusia_affinis
ENSPEMG00000024193	-	100	79.348	ENSGACG00000007179	pabpc4	100	79.876	Gasterosteus_aculeatus
ENSPEMG00000024193	-	99	85.759	ENSGAGG00000001888	PABPC4	99	85.759	Gopherus_agassizii
ENSPEMG00000024193	-	99	91.061	ENSGGOG00000004002	PABPC4	100	91.061	Gorilla_gorilla
ENSPEMG00000024193	-	100	79.969	ENSHBUG00000020206	pabpc4	100	79.294	Haplochromis_burtoni
ENSPEMG00000024193	-	99	93.634	ENSHGLG00000011162	PABPC4	100	93.634	Heterocephalus_glaber_female
ENSPEMG00000024193	-	99	93.634	ENSHGLG00100001580	PABPC4	100	93.634	Heterocephalus_glaber_male
ENSPEMG00000024193	-	100	79.283	ENSHCOG00000012694	pabpc4	99	79.907	Hippocampus_comes
ENSPEMG00000024193	-	98	79.426	ENSIPUG00000016620	pabpc4	100	79.719	Ictalurus_punctatus
ENSPEMG00000024193	-	99	93.634	ENSSTOG00000010416	PABPC4	100	93.634	Ictidomys_tridecemlineatus
ENSPEMG00000024193	-	99	91.460	ENSJJAG00000007781	Pabpc4	100	91.460	Jaculus_jaculus
ENSPEMG00000024193	-	99	79.782	ENSKMAG00000013597	pabpc4	99	79.535	Kryptolebias_marmoratus
ENSPEMG00000024193	-	99	79.563	ENSLBEG00000013654	pabpc4	99	79.380	Labrus_bergylta
ENSPEMG00000024193	-	99	83.123	ENSLACG00000011907	PABPC4	99	83.123	Latimeria_chalumnae
ENSPEMG00000024193	-	100	80.586	ENSLOCG00000001877	pabpc4	100	80.245	Lepisosteus_oculatus
ENSPEMG00000024193	-	99	91.212	ENSLAFG00000000151	PABPC4	100	91.212	Loxodonta_africana
ENSPEMG00000024193	-	99	91.212	ENSMFAG00000041481	PABPC4	100	91.212	Macaca_fascicularis
ENSPEMG00000024193	-	99	91.212	ENSMMUG00000007497	PABPC4	100	91.212	Macaca_mulatta
ENSPEMG00000024193	-	99	91.061	ENSMNEG00000043054	PABPC4	100	91.061	Macaca_nemestrina
ENSPEMG00000024193	-	99	91.212	ENSMLEG00000040716	PABPC4	100	91.212	Mandrillus_leucophaeus
ENSPEMG00000024193	-	99	80.000	ENSMAMG00000010025	pabpc4	99	79.507	Mastacembelus_armatus
ENSPEMG00000024193	-	100	79.814	ENSMZEG00005006141	pabpc4	100	79.141	Maylandia_zebra
ENSPEMG00000024193	-	99	81.726	ENSMGAG00000005408	PABPC4	100	81.726	Meleagris_gallopavo
ENSPEMG00000024193	-	71	87.981	ENSMAUG00000001295	-	97	87.981	Mesocricetus_auratus
ENSPEMG00000024193	-	54	80.117	ENSMAUG00000004089	-	92	80.117	Mesocricetus_auratus
ENSPEMG00000024193	-	75	98.958	ENSMAUG00000019763	-	84	95.370	Mesocricetus_auratus
ENSPEMG00000024193	-	99	76.720	ENSMICG00000036729	-	100	76.367	Microcebus_murinus
ENSPEMG00000024193	-	88	90.783	ENSMICG00000016633	-	100	90.957	Microcebus_murinus
ENSPEMG00000024193	-	100	91.831	ENSMOCG00000006763	Pabpc4	99	91.831	Microtus_ochrogaster
ENSPEMG00000024193	-	100	77.934	ENSMMOG00000002363	pabpc4	99	78.750	Mola_mola
ENSPEMG00000024193	-	97	83.956	ENSMODG00000017657	-	99	83.639	Monodelphis_domestica
ENSPEMG00000024193	-	58	71.469	ENSMODG00000018051	-	91	71.469	Monodelphis_domestica
ENSPEMG00000024193	-	99	79.435	ENSMALG00000011017	pabpc4	100	80.031	Monopterus_albus
ENSPEMG00000024193	-	99	82.862	MGP_CAROLIEiJ_G0024864	-	100	82.862	Mus_caroli
ENSPEMG00000024193	-	99	91.324	MGP_CAROLIEiJ_G0026435	-	100	98.582	Mus_caroli
ENSPEMG00000024193	-	99	93.634	ENSMUSG00000011257	Pabpc4	98	98.788	Mus_musculus
ENSPEMG00000024193	-	99	91.091	MGP_PahariEiJ_G0028765	Pabpc4	100	99.291	Mus_pahari
ENSPEMG00000024193	-	99	72.660	MGP_SPRETEiJ_G0027415	Pabpc4	100	98.582	Mus_spretus
ENSPEMG00000024193	-	95	48.191	ENSMPUG00000006836	-	100	47.446	Mustela_putorius_furo
ENSPEMG00000024193	-	99	91.212	ENSMPUG00000014414	-	100	91.212	Mustela_putorius_furo
ENSPEMG00000024193	-	99	90.394	ENSMLUG00000012068	PABPC4	100	90.394	Myotis_lucifugus
ENSPEMG00000024193	-	99	93.634	ENSNGAG00000018292	Pabpc4	100	93.634	Nannospalax_galili
ENSPEMG00000024193	-	66	84.181	ENSNBRG00000010047	-	75	84.181	Neolamprologus_brichardi
ENSPEMG00000024193	-	64	89.423	ENSNBRG00000009708	pabpc4	98	89.423	Neolamprologus_brichardi
ENSPEMG00000024193	-	99	93.478	ENSNLEG00000011928	PABPC4	100	93.478	Nomascus_leucogenys
ENSPEMG00000024193	-	81	95.238	ENSOPRG00000011984	PABPC4	84	95.238	Ochotona_princeps
ENSPEMG00000024193	-	99	90.455	ENSODEG00000006592	-	100	90.455	Octodon_degus
ENSPEMG00000024193	-	52	85.000	ENSODEG00000013457	-	100	85.000	Octodon_degus
ENSPEMG00000024193	-	99	80.493	ENSODEG00000017434	-	100	80.493	Octodon_degus
ENSPEMG00000024193	-	100	79.969	ENSONIG00000008176	pabpc4	100	79.294	Oreochromis_niloticus
ENSPEMG00000024193	-	99	86.032	ENSOANG00000010001	PABPC4	99	86.032	Ornithorhynchus_anatinus
ENSPEMG00000024193	-	95	90.981	ENSOCUG00000000562	PABPC4	88	90.981	Oryctolagus_cuniculus
ENSPEMG00000024193	-	99	87.346	ENSORLG00000017479	pabpc4	99	87.346	Oryzias_latipes
ENSPEMG00000024193	-	99	87.346	ENSORLG00020018644	pabpc4	100	87.346	Oryzias_latipes_hni
ENSPEMG00000024193	-	99	87.346	ENSORLG00015015042	pabpc4	100	87.346	Oryzias_latipes_hsok
ENSPEMG00000024193	-	99	80.696	ENSOMEG00000014410	pabpc4	100	80.216	Oryzias_melastigma
ENSPEMG00000024193	-	99	93.045	ENSOGAG00000004067	PABPC4	100	93.045	Otolemur_garnettii
ENSPEMG00000024193	-	99	90.909	ENSOARG00000020060	PABPC4	100	90.909	Ovis_aries
ENSPEMG00000024193	-	99	91.061	ENSPPAG00000043625	PABPC4	100	91.061	Pan_paniscus
ENSPEMG00000024193	-	99	91.212	ENSPPRG00000024727	PABPC4	100	91.212	Panthera_pardus
ENSPEMG00000024193	-	99	91.212	ENSPTIG00000005829	PABPC4	100	91.212	Panthera_tigris_altaica
ENSPEMG00000024193	-	99	91.061	ENSPTRG00000000573	PABPC4	100	91.061	Pan_troglodytes
ENSPEMG00000024193	-	99	91.212	ENSPANG00000009484	PABPC4	100	91.212	Papio_anubis
ENSPEMG00000024193	-	99	79.875	ENSPKIG00000025356	pabpc4	99	79.199	Paramormyrops_kingsleyae
ENSPEMG00000024193	-	99	85.759	ENSPSIG00000016892	PABPC4	99	85.759	Pelodiscus_sinensis
ENSPEMG00000024193	-	100	78.717	ENSPMGG00000009073	pabpc4	99	78.125	Periophthalmus_magnuspinnatus
ENSPEMG00000024193	-	88	72.134	ENSPMAG00000002836	pabpc4	99	70.478	Petromyzon_marinus
ENSPEMG00000024193	-	95	67.821	ENSPMAG00000007885	pabpc4	99	66.864	Petromyzon_marinus
ENSPEMG00000024193	-	97	86.591	ENSPCIG00000020674	PABPC4	100	90.476	Phascolarctos_cinereus
ENSPEMG00000024193	-	100	79.160	ENSPFOG00000002682	pabpc4	100	79.938	Poecilia_formosa
ENSPEMG00000024193	-	100	79.005	ENSPLAG00000010112	pabpc4	100	79.938	Poecilia_latipinna
ENSPEMG00000024193	-	99	79.621	ENSPMEG00000019739	pabpc4	100	79.938	Poecilia_mexicana
ENSPEMG00000024193	-	100	79.627	ENSPREG00000001589	pabpc4	100	79.938	Poecilia_reticulata
ENSPEMG00000024193	-	99	91.061	ENSPPYG00000001506	PABPC4	100	91.061	Pongo_abelii
ENSPEMG00000024193	-	99	86.212	ENSPCAG00000003341	PABPC4	100	86.212	Procavia_capensis
ENSPEMG00000024193	-	99	74.703	ENSPCOG00000025882	-	98	85.455	Propithecus_coquereli
ENSPEMG00000024193	-	99	91.225	ENSPCOG00000023725	-	100	91.225	Propithecus_coquereli
ENSPEMG00000024193	-	99	89.748	ENSPVAG00000002187	PABPC4	100	89.748	Pteropus_vampyrus
ENSPEMG00000024193	-	100	79.814	ENSPNYG00000006134	pabpc4	100	79.141	Pundamilia_nyererei
ENSPEMG00000024193	-	100	79.627	ENSPNAG00000024355	pabpc4	100	80.124	Pygocentrus_nattereri
ENSPEMG00000024193	-	99	91.460	ENSRNOG00000028592	AABR07035074.1	100	91.460	Rattus_norvegicus
ENSPEMG00000024193	-	99	93.323	ENSRNOG00000015642	Pabpc4	100	93.323	Rattus_norvegicus
ENSPEMG00000024193	-	99	91.212	ENSRBIG00000039761	PABPC4	100	91.212	Rhinopithecus_bieti
ENSPEMG00000024193	-	99	91.212	ENSRROG00000033355	PABPC4	100	91.212	Rhinopithecus_roxellana
ENSPEMG00000024193	-	99	91.061	ENSSBOG00000026193	PABPC4	100	91.061	Saimiri_boliviensis_boliviensis
ENSPEMG00000024193	-	97	86.591	ENSSHAG00000018139	PABPC4	99	86.212	Sarcophilus_harrisii
ENSPEMG00000024193	-	99	81.392	ENSSFOG00015023514	pabpc4	99	81.392	Scleropages_formosus
ENSPEMG00000024193	-	99	79.343	ENSSMAG00000009007	pabpc4	99	79.407	Scophthalmus_maximus
ENSPEMG00000024193	-	99	80.315	ENSSDUG00000012683	pabpc4	95	86.957	Seriola_dumerili
ENSPEMG00000024193	-	99	80.315	ENSSLDG00000013025	pabpc4	97	86.957	Seriola_lalandi_dorsalis
ENSPEMG00000024193	-	99	84.043	ENSSARG00000000310	PABPC4	99	84.043	Sorex_araneus
ENSPEMG00000024193	-	99	85.039	ENSSPUG00000003204	PABPC4	99	84.317	Sphenodon_punctatus
ENSPEMG00000024193	-	99	80.472	ENSSPAG00000009252	pabpc4	98	87.220	Stegastes_partitus
ENSPEMG00000024193	-	99	91.061	ENSSSCG00000003660	-	100	91.061	Sus_scrofa
ENSPEMG00000024193	-	89	48.780	ENSSSCG00000036170	-	96	49.129	Sus_scrofa
ENSPEMG00000024193	-	99	81.611	ENSTGUG00000001266	PABPC4	99	81.611	Taeniopygia_guttata
ENSPEMG00000024193	-	99	79.310	ENSTRUG00000005907	pabpc4	99	79.937	Takifugu_rubripes
ENSPEMG00000024193	-	99	75.868	ENSTNIG00000016902	pabpc4	99	75.701	Tetraodon_nigroviridis
ENSPEMG00000024193	-	99	79.966	ENSTBEG00000009035	PABPC4	100	79.966	Tupaia_belangeri
ENSPEMG00000024193	-	99	81.431	ENSTTRG00000014340	PABPC4	100	81.431	Tursiops_truncatus
ENSPEMG00000024193	-	99	91.024	ENSUAMG00000000303	PABPC4	100	91.024	Ursus_americanus
ENSPEMG00000024193	-	99	90.909	ENSUMAG00000019585	PABPC4	100	95.283	Ursus_maritimus
ENSPEMG00000024193	-	83	85.714	ENSVPAG00000010041	PABPC4	77	85.714	Vicugna_pacos
ENSPEMG00000024193	-	99	91.181	ENSVVUG00000005215	PABPC4	100	91.181	Vulpes_vulpes
ENSPEMG00000024193	-	57	97.576	ENSXETG00000027221	-	98	97.576	Xenopus_tropicalis
ENSPEMG00000024193	-	99	78.956	ENSXETG00000010946	pabpc4	99	78.956	Xenopus_tropicalis
ENSPEMG00000024193	-	99	85.714	ENSXCOG00000013190	pabpc4	96	84.434	Xiphophorus_couchianus
ENSPEMG00000024193	-	100	79.471	ENSXMAG00000019007	pabpc4	100	79.784	Xiphophorus_maculatus